RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 SLC45A3Q96JT2 553 aa2.1□□□□□ -2.07
CCDC93-209ENST00000488908 EPB41L5Q9HCM4 733 aa2.1□□□□□ -2.07
CCDC93-209ENST00000488908 B4GALT7Q9UBV7 327 aa2.1□□□□□ -2.07
CCDC93-209ENST00000488908 ZNF107Q9UII5 783 aaPredicted RBP2.1□□□□□ -2.07
CCDC93-209ENST00000488908 SARDHQ9UL12 918 aa2.1□□□□□ -2.07
CCDC93-209ENST00000488908 GRID1Q9ULK0 1009 aa2.1□□□□□ -2.07
CCDC93-209ENST00000488908 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 A0A1W2PN81 502 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 TMEM129A0AVI4 362 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 C15orf61A6NNL5 157 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 TMEM189-UBE2V1I3L0A0 370 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 J3QR06 171 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 PLPP2O43688 288 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 GPRIN2O60269 458 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 PRKRAO75569 313 aaKnown RBP2.09□□□□□ -2.07
CCDC93-209ENST00000488908 SELLP14151 372 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 CYP2A7P20853 494 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 PRKACGP22612 351 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 CHRNA7P36544 502 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 PSMC4P43686 418 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 MAPK9P45984 424 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 LRMPQ12912 555 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 PRKAA1Q13131 559 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 UBE2V1Q13404 147 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 GPR68Q15743 365 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 VITQ6UXI7 678 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 ZNF534Q76KX8 674 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 ADCK1Q86TW2 530 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 ZNF354CQ86Y25 554 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 ZBED8Q8IZ13 594 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 OR10G8Q8NGN5 311 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 GCC1Q96CN9 775 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 SAAL1Q96ER3 474 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 APOPT1Q96IL0 206 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 EGLN2Q96KS0 407 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 C1orf147Q96MC9 270 aaPredicted RBP2.09□□□□□ -2.07
CCDC93-209ENST00000488908 GFI1Q99684 422 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 GPR63Q9BZJ6 419 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 MBNL1Q9NR56 388 aaKnown RBP2.09□□□□□ -2.07
CCDC93-209ENST00000488908 RIPK3Q9Y572 518 aa2.09□□□□□ -2.07
CCDC93-209ENST00000488908 SHROOM4Q9ULL8 1493 aa2.08□□□□□ -2.08
CCDC93-209ENST00000488908 LOC101059948A0A1B0GTJ6 334 aa2.08□□□□□ -2.08
CCDC93-209ENST00000488908 A0A1W2PRB8 838 aa2.08□□□□□ -2.08
CCDC93-209ENST00000488908 DAB1O75553 588 aa2.08□□□□□ -2.08
CCDC93-209ENST00000488908 ACP2P11117 423 aa2.08□□□□□ -2.08
CCDC93-209ENST00000488908 BCL3P20749 454 aa2.08□□□□□ -2.08
CCDC93-209ENST00000488908 CA6P23280 308 aa2.08□□□□□ -2.08
CCDC93-209ENST00000488908 EIF3BP55884 814 aaKnown RBP2.08□□□□□ -2.08
CCDC93-209ENST00000488908 LYZP61626 148 aa2.08□□□□□ -2.08
CCDC93-209ENST00000488908 TPRG1Q6ZUI0 275 aa2.08□□□□□ -2.08
CCDC93-209ENST00000488908 SPICE1Q8N0Z3 855 aa2.08□□□□□ -2.08
CCDC93-209ENST00000488908 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.08□□□□□ -2.08
CCDC93-209ENST00000488908 NUP37Q8NFH4 326 aa2.08□□□□□ -2.08
CCDC93-209ENST00000488908 SMAP2Q8WU79 429 aaPredicted RBP2.08□□□□□ -2.08
CCDC93-209ENST00000488908 HERVK_113Q902F9 699 aa2.08□□□□□ -2.08
CCDC93-209ENST00000488908 CCT6BQ92526 530 aa2.08□□□□□ -2.08
CCDC93-209ENST00000488908 PDLIM5Q96HC4 596 aaKnown RBP2.08□□□□□ -2.08
CCDC93-209ENST00000488908 SGK494Q96LW2 274 aa2.08□□□□□ -2.08
CCDC93-209ENST00000488908 AGAP4Q96P64 663 aa2.08□□□□□ -2.08
CCDC93-209ENST00000488908 ZIM3Q96PE6 472 aa2.08□□□□□ -2.08
CCDC93-209ENST00000488908 RIC8AQ9NPQ8 531 aa2.08□□□□□ -2.08
CCDC93-209ENST00000488908 MKLN1Q9UL63 735 aa2.08□□□□□ -2.08
CCDC93-209ENST00000488908 CAMK2AQ9UQM7 478 aa2.08□□□□□ -2.08
CCDC93-209ENST00000488908 CAPN7Q9Y6W3 813 aa2.08□□□□□ -2.08
CCDC93-209ENST00000488908 KIF25-AS1Q9Y6Z4 181 aa2.08□□□□□ -2.08
CCDC93-209ENST00000488908 A0A1W2PRG0 241 aa2.07□□□□□ -2.08
CCDC93-209ENST00000488908 MED19A0JLT2 244 aaPredicted RBP2.07□□□□□ -2.08
CCDC93-209ENST00000488908 HOXD4P09016 255 aaPredicted RBP2.07□□□□□ -2.08
CCDC93-209ENST00000488908 LEPRP48357 1165 aaKnown RBP2.07□□□□□ -2.08
CCDC93-209ENST00000488908 HNRNPA3P51991 378 aaKnown RBP2.07□□□□□ -2.08
CCDC93-209ENST00000488908 F2RL1P55085 397 aa2.07□□□□□ -2.08
CCDC93-209ENST00000488908 TAS2R40P59535 323 aa2.07□□□□□ -2.08
CCDC93-209ENST00000488908 HERV-K104P61576 105 aa2.07□□□□□ -2.08
CCDC93-209ENST00000488908 GAGE2BQ13066 116 aa2.07□□□□□ -2.08
CCDC93-209ENST00000488908 MTHFSDQ2M296 383 aaKnown RBP2.07□□□□□ -2.08
CCDC93-209ENST00000488908 GAGE2EQ4V326 116 aa2.07□□□□□ -2.08
CCDC93-209ENST00000488908 XKR3Q5GH77 459 aa2.07□□□□□ -2.08
CCDC93-209ENST00000488908 FAM109BQ6ICB4 259 aaPredicted RBP2.07□□□□□ -2.08
CCDC93-209ENST00000488908 GAGE2AQ6NT46 116 aa2.07□□□□□ -2.08
CCDC93-209ENST00000488908 ABHD12Q8N2K0 398 aa2.07□□□□□ -2.08
CCDC93-209ENST00000488908 ENAHQ8N8S7 591 aaPredicted RBP2.07□□□□□ -2.08
CCDC93-209ENST00000488908 SUMF1Q8NBK3 374 aa2.07□□□□□ -2.08
CCDC93-209ENST00000488908 OLIG1Q8TAK6 271 aa2.07□□□□□ -2.08
CCDC93-209ENST00000488908 GSDMBQ8TAX9 411 aa2.07□□□□□ -2.08
CCDC93-209ENST00000488908 DAZLQ92904 295 aaKnown RBP2.07□□□□□ -2.08
CCDC93-209ENST00000488908 MMABQ96EY8 250 aaPredicted RBP2.07□□□□□ -2.08
CCDC93-209ENST00000488908 MTMR10Q9NXD2 777 aa2.07□□□□□ -2.08
CCDC93-209ENST00000488908 NDE1Q9NXR1 346 aa2.07□□□□□ -2.08
CCDC93-209ENST00000488908 GAGE2DQ9UEU5 116 aa2.07□□□□□ -2.08
CCDC93-209ENST00000488908 CNOT8Q9UFF9 292 aaKnown RBP2.07□□□□□ -2.08
CCDC93-209ENST00000488908 TNFSF14O43557 240 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 SLC25A12O75746 678 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 DFFBO76075 338 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 KLK2P20151 261 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 CA4P22748 312 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 HALP42357 657 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 MORC3Q14149 939 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 BRD3Q15059 726 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 ADIPOQQ15848 244 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 MEP1AQ16819 746 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms