RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 B3GNT8Q7Z7M8 397 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 CEP112Q8N8E3 955 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 Q8N9G6 341 aaPredicted RBP18.22■□□□□ 0.51
PTCD3-217ENST00000488801 FBXO36Q8NEA4 188 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 SLC38A3Q99624 504 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 LATS2Q9NRM7 1088 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 KCNK4Q9NYG8 393 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 MOCS1Q9NZB8 636 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 OGFRQ9NZT2 677 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 FAM8A1Q9UBU6 413 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 FBXO5Q9UKT4 447 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 SDK2Q58EX2 2172 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 USP24Q9UPU5 2620 aa18.22■□□□□ 0.51
PTCD3-217ENST00000488801 MN1Q10571 1320 aaPredicted RBP18.22■□□□□ 0.51
PTCD3-217ENST00000488801 A0A1W2PNU3 283 aaPredicted RBP18.21■□□□□ 0.51
PTCD3-217ENST00000488801 UBA6A0AVT1 1052 aaPredicted RBP18.21■□□□□ 0.51
PTCD3-217ENST00000488801 IQCF5A8MTL0 148 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 SLCO2B1O94956 709 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 CAPNS1P04632 268 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 F7P08709 466 aaPredicted RBP18.21■□□□□ 0.51
PTCD3-217ENST00000488801 ERVK-10P10266 1014 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 SPTBP11277 2137 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 JUPP14923 745 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 ALDH4A1P30038 563 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 PLTPP55058 493 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 MPP1Q00013 466 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 GLE1Q53GS7 698 aaKnown RBP18.21■□□□□ 0.51
PTCD3-217ENST00000488801 HP1BP3Q5SSJ5 553 aaPredicted RBP18.21■□□□□ 0.51
PTCD3-217ENST00000488801 DUS1LQ6P1R4 473 aaKnown RBP18.21■□□□□ 0.51
PTCD3-217ENST00000488801 ZNF549Q6P9A3 640 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 ZNF574Q6ZN55 896 aaPredicted RBP18.21■□□□□ 0.51
PTCD3-217ENST00000488801 KIAA0408Q6ZU52 694 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 ANKMY2Q8IV38 441 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 ZBED8Q8IZ13 594 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 SLC22A15Q8IZD6 547 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 KRT222Q8N1A0 295 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 OTUD6BQ8N6M0 293 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 ZFPM2Q8WW38 1151 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 CXorf40BQ96DE9 158 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 LIN37Q96GY3 246 aaPredicted RBP18.21■□□□□ 0.51
PTCD3-217ENST00000488801 C12orf66Q96MD2 445 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 PANX3Q96QZ0 392 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 NUDT22Q9BRQ3 303 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 TSSK1BQ9BXA7 367 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 TBC1D10AQ9BXI6 508 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 FAM129AQ9BZQ8 928 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 FOXP3Q9BZS1 431 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 PDP2Q9P2J9 529 aa18.21■□□□□ 0.51
PTCD3-217ENST00000488801 ATXN7L1Q9ULK2 861 aaPredicted RBP18.21■□□□□ 0.51
PTCD3-217ENST00000488801 MDC1Q14676 2089 aaKnown RBP18.2■□□□□ 0.5
PTCD3-217ENST00000488801 H3BMM5 538 aa18.2■□□□□ 0.5
PTCD3-217ENST00000488801 PFDN6O15212 129 aa18.2■□□□□ 0.5
PTCD3-217ENST00000488801 ZW10O43264 779 aa18.2■□□□□ 0.5
PTCD3-217ENST00000488801 DUX1O43812 170 aa18.2■□□□□ 0.5
PTCD3-217ENST00000488801 C1QAP02745 245 aa18.2■□□□□ 0.5
PTCD3-217ENST00000488801 PKMP14618 531 aaKnown RBP18.2■□□□□ 0.5
PTCD3-217ENST00000488801 GABRB3P28472 473 aa18.2■□□□□ 0.5
PTCD3-217ENST00000488801 ECHS1P30084 290 aa18.2■□□□□ 0.5
PTCD3-217ENST00000488801 BOP1Q14137 746 aaKnown RBP18.2■□□□□ 0.5
PTCD3-217ENST00000488801 WDR74Q6RFH5 385 aaPredicted RBP18.2■□□□□ 0.5
PTCD3-217ENST00000488801 VRK3Q8IV63 474 aa18.2■□□□□ 0.5
PTCD3-217ENST00000488801 TRIM48Q8IWZ4 208 aa18.2■□□□□ 0.5
PTCD3-217ENST00000488801 GSDMBQ8TAX9 411 aa18.2■□□□□ 0.5
PTCD3-217ENST00000488801 CFAP36Q96G28 342 aa18.2■□□□□ 0.5
PTCD3-217ENST00000488801 DPYSL5Q9BPU6 564 aa18.2■□□□□ 0.5
PTCD3-217ENST00000488801 KIR3DX1Q9H7L2 352 aa18.2■□□□□ 0.5
PTCD3-217ENST00000488801 FBXO6Q9NRD1 293 aaPredicted RBP18.2■□□□□ 0.5
PTCD3-217ENST00000488801 IARS2Q9NSE4 1012 aaKnown RBP18.2■□□□□ 0.5
PTCD3-217ENST00000488801 IMP3Q9NV31 184 aaKnown RBP18.2■□□□□ 0.5
PTCD3-217ENST00000488801 CRYL1Q9Y2S2 319 aa18.2■□□□□ 0.5
PTCD3-217ENST00000488801 HEBP2Q9Y5Z4 205 aa18.2■□□□□ 0.5
PTCD3-217ENST00000488801 CFAP20Q9Y6A4 193 aaKnown RBP18.2■□□□□ 0.5
PTCD3-217ENST00000488801 NIPSNAP2O75323 286 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 THRAP10827 490 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 NDUFS1P28331 727 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 CAPZBP47756 277 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 BIRC2Q13490 618 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 RTP5Q14D33 572 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 MAP9Q49MG5 647 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 TEDDM1Q5T9Z0 273 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 NKAIN2Q5VXU1 208 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 PTRHD1Q6GMV3 140 aaKnown RBP18.19■□□□□ 0.5
PTCD3-217ENST00000488801 ZNF449Q6P9G9 518 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 NAPRTQ6XQN6 538 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 OR4D9Q8NGE8 314 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 OR10G6Q8NH81 332 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 ASZ1Q8WWH4 475 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 TMEM159Q96B96 161 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 MCMBPQ9BTE3 642 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 NRSN2Q9GZP1 204 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 TWSG1Q9GZX9 223 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 RAB33BQ9H082 229 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 RDH14Q9HBH5 336 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 SAYSD1Q9NPB0 183 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 SLC17A6Q9P2U8 582 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 SLC24A2Q9UI40 661 aa18.19■□□□□ 0.5
PTCD3-217ENST00000488801 C9P02748 559 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 HOXB3P14651 431 aaPredicted RBP18.18■□□□□ 0.5
PTCD3-217ENST00000488801 ITGB6P18564 788 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 ATP5DP30049 168 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms