RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 KIR3DX1Q9H7L2 352 aa11.05□□□□□ -0.64
SNU13-208ENST00000488571 CELSR2Q9HCU4 2923 aa11.05□□□□□ -0.64
SNU13-208ENST00000488571 SLAMF7Q9NQ25 335 aa11.05□□□□□ -0.64
SNU13-208ENST00000488571 SAE1Q9UBE0 346 aaPredicted RBP11.05□□□□□ -0.64
SNU13-208ENST00000488571 FAM153AQ9UHL3 310 aa11.05□□□□□ -0.64
SNU13-208ENST00000488571 ERRFI1Q9UJM3 462 aaPredicted RBP11.05□□□□□ -0.64
SNU13-208ENST00000488571 SNX7Q9UNH6 387 aa11.05□□□□□ -0.64
SNU13-208ENST00000488571 CRYBG3Q68DQ2 2970 aa11.05□□□□□ -0.64
SNU13-208ENST00000488571 CENPEQ02224 2701 aa11.05□□□□□ -0.64
SNU13-208ENST00000488571 FER1L5A0AVI2 2057 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 SLC9B1P1A6NJY1 282 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 ZNF185O15231 689 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 SGTAO43765 313 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 LDLRP01130 860 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 EPOP01588 193 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 KLK3P07288 261 aaPredicted RBP11.04□□□□□ -0.64
SNU13-208ENST00000488571 POLR2CP19387 275 aaPredicted RBP11.04□□□□□ -0.64
SNU13-208ENST00000488571 NFKB1P19838 968 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 DCTP40126 519 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 VAV2P52735 878 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 DYNLT1P63172 113 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 FANCCQ00597 558 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 ATP1A4Q13733 1029 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 MESDQ14696 234 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 PTPRCAPQ14761 206 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 ASTE1Q2TB18 679 aaPredicted RBP11.04□□□□□ -0.64
SNU13-208ENST00000488571 TMTC4Q5T4D3 741 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 ZDHHC20Q5W0Z9 365 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 DET1Q7L5Y6 550 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 HPS6Q86YV9 775 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 SLC25A41Q8N5S1 370 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 LILRA3Q8N6C8 439 aaPredicted RBP11.04□□□□□ -0.64
SNU13-208ENST00000488571 TMEM102Q8N9M5 508 aaPredicted RBP11.04□□□□□ -0.64
SNU13-208ENST00000488571 OR1L3Q8NH93 324 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 PRR7Q8TB68 274 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 CPT1BQ92523 772 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 OXNAD1Q96HP4 312 aaPredicted RBP11.04□□□□□ -0.64
SNU13-208ENST00000488571 RMDN2Q96LZ7 410 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 C12orf66Q96MD2 445 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 SMAD5Q99717 465 aaKnown RBP11.04□□□□□ -0.64
SNU13-208ENST00000488571 NRTNQ99748 197 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 PCMTD2Q9NV79 361 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 SMOXQ9NWM0 555 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 SOHLH2Q9NX45 425 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.04□□□□□ -0.64
SNU13-208ENST00000488571 FAM8A1Q9UBU6 413 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 LCMT1Q9UIC8 334 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 POMT2Q9UKY4 750 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 LUC7L2Q9Y383 392 aaKnown RBP11.04□□□□□ -0.64
SNU13-208ENST00000488571 CREBBPQ92793 2442 aa11.04□□□□□ -0.64
SNU13-208ENST00000488571 MGAT4DA6NG13 374 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 A6NL46 340 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 F5H423 210 aaPredicted RBP11.03□□□□□ -0.64
SNU13-208ENST00000488571 KRT86O43790 486 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 CBX6O95503 412 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 KRT1P04264 644 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 TMEM253P0C7T8 217 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 PECAM1P16284 738 aaPredicted RBP11.03□□□□□ -0.64
SNU13-208ENST00000488571 ZFXP17010 805 aaPredicted RBP11.03□□□□□ -0.64
SNU13-208ENST00000488571 HNRNPH3P31942 346 aaKnown RBP11.03□□□□□ -0.64
SNU13-208ENST00000488571 RAPSNQ13702 412 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 ITGA9Q13797 1035 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 NR6A1Q15406 480 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 SLC1A5Q15758 541 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 SLC18A3Q16572 532 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 PTCHD3Q3KNS1 767 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 ZNF385CQ66K41 422 aaPredicted RBP11.03□□□□□ -0.64
SNU13-208ENST00000488571 MED25Q71SY5 747 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 MAMDC2Q7Z304 686 aaPredicted RBP11.03□□□□□ -0.64
SNU13-208ENST00000488571 GLT6D1Q7Z4J2 308 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 RFX6Q8HWS3 928 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 SYTL1Q8IYJ3 562 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 OR2L2Q8NH16 312 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 SLC35G2Q8TBE7 412 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 BLOC1S5Q8TDH9 187 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 SNRNP40Q96DI7 357 aaKnown RBP11.03□□□□□ -0.64
SNU13-208ENST00000488571 IQCDQ96DY2 449 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 CLIP3Q96DZ5 547 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 MAK16Q9BXY0 300 aaKnown RBP11.03□□□□□ -0.64
SNU13-208ENST00000488571 SLC29A3Q9BZD2 475 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 GPR83Q9NYM4 423 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 HACD3Q9P035 362 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 ACSL5Q9ULC5 683 aa11.03□□□□□ -0.64
SNU13-208ENST00000488571 PIKFYVEQ9Y2I7 2098 aa11.02□□□□□ -0.64
SNU13-208ENST00000488571 LRBAP50851 2863 aa11.02□□□□□ -0.65
SNU13-208ENST00000488571 TMEM150CB9EJG8 249 aa11.02□□□□□ -0.65
SNU13-208ENST00000488571 GOLGA6L22H0YM25 854 aa11.02□□□□□ -0.65
SNU13-208ENST00000488571 PRAMEF1O95521 474 aa11.02□□□□□ -0.65
SNU13-208ENST00000488571 SLC35G4P0C7Q5 338 aa11.02□□□□□ -0.65
SNU13-208ENST00000488571 MSL3P1P0C860 447 aa11.02□□□□□ -0.65
SNU13-208ENST00000488571 ST6GAL1P15907 406 aa11.02□□□□□ -0.65
SNU13-208ENST00000488571 HLA-DPA1P20036 260 aa11.02□□□□□ -0.65
SNU13-208ENST00000488571 MSH3P20585 1137 aa11.02□□□□□ -0.65
SNU13-208ENST00000488571 CDH3P22223 829 aa11.02□□□□□ -0.65
SNU13-208ENST00000488571 VARSP26640 1264 aaKnown RBP11.02□□□□□ -0.65
SNU13-208ENST00000488571 AKT1P31749 480 aa11.02□□□□□ -0.65
SNU13-208ENST00000488571 UBASH3AP57075 661 aa11.02□□□□□ -0.65
SNU13-208ENST00000488571 NCF4Q15080 339 aa11.02□□□□□ -0.65
SNU13-208ENST00000488571 LONRF2Q1L5Z9 754 aa11.02□□□□□ -0.65
SNU13-208ENST00000488571 PLEKHN1Q494U1 663 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms