RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 ZFP69BQ9UJL9 534 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 RAB23Q9ULC3 237 aa12.49□□□□□ -0.41
NELFE-209ENST00000488426 RRP15Q9Y3B9 282 aaKnown RBP12.49□□□□□ -0.41
NELFE-209ENST00000488426 SNX2O60749 519 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 CCDC22O60826 627 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 SUPT7LO94864 414 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 CCR7P32248 378 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 CCR10P46092 362 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 IDH3AP50213 366 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 COPAP53621 1224 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 RPS14P62263 151 aaKnown RBP12.48□□□□□ -0.41
NELFE-209ENST00000488426 BNIP1Q12981 228 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 TGFBIQ15582 683 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 SEL1L3Q68CR1 1132 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 KIAA1211LQ6NV74 962 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 SBSNQ6UWP8 590 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 FRA10AC1Q70Z53 315 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 NAT14Q8WUY8 206 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 MOCOSQ96EN8 888 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 RILPQ96NA2 401 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 ZCCHC2Q9C0B9 1178 aaKnown RBP12.48□□□□□ -0.41
NELFE-209ENST00000488426 SLC6A17Q9H1V8 727 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 CD248Q9HCU0 757 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 CD93Q9NPY3 652 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 ACSS2Q9NR19 701 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 SEMA4GQ9NTN9 838 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 ZDHHC2Q9UIJ5 367 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 GMEB2Q9UKD1 530 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 COQ6Q9Y2Z9 468 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 A0A1W2PQF6 199 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 RAD51BO15315 384 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 SGTAO43765 313 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 SOD1P00441 154 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 RPS17P08708 135 aaKnown RBP12.48□□□□□ -0.41
NELFE-209ENST00000488426 HOXB2P14652 356 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 GPR1P46091 355 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 CORO7P57737 925 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 SF3A2Q15428 464 aaKnown RBP12.48□□□□□ -0.41
NELFE-209ENST00000488426 PPP1R3AQ16821 1122 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 KHDC1Q4VXA5 237 aaKnown RBP12.48□□□□□ -0.41
NELFE-209ENST00000488426 SWT1Q5T5J6 900 aaKnown RBP12.48□□□□□ -0.41
NELFE-209ENST00000488426 EPGNQ6UW88 154 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 DET1Q7L5Y6 550 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 HDDC3Q8N4P3 179 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 FAM131CQ96AQ9 280 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 EBF4Q9BQW3 602 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 COG4Q9H9E3 785 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 SAR1AQ9NR31 198 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 CD274Q9NZQ7 290 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 SCML1Q9UN30 329 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 OARD1Q9Y530 152 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 THADAQ6YHU6 1953 aa12.48□□□□□ -0.41
NELFE-209ENST00000488426 FCHO1O14526 889 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 HGSO14964 777 aaPredicted RBP12.47□□□□□ -0.41
NELFE-209ENST00000488426 NUAK1O60285 661 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 MTX2O75431 263 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 ATP5HO75947 161 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 S100BP04271 92 aaPredicted RBP12.47□□□□□ -0.41
NELFE-209ENST00000488426 MPC1LP0DKB6 136 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 C7P10643 843 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 EEF1DP29692 281 aaKnown RBP12.47□□□□□ -0.41
NELFE-209ENST00000488426 SCTRP47872 440 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 PRLHRP49683 370 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 HK3P52790 923 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 TAS2R38P59533 333 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 TMEM115Q12893 351 aaPredicted RBP12.47□□□□□ -0.41
NELFE-209ENST00000488426 TUBB3Q13509 450 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 AGERQ15109 404 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 SPRED3Q2MJR0 410 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 SH2D4BQ5SQS7 431 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 ANKS6Q68DC2 871 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 RAET1GQ6H3X3 334 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 TCEAL6Q6IPX3 200 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.47□□□□□ -0.41
NELFE-209ENST00000488426 CYHR1Q6ZMK1 362 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 NEK10Q6ZWH5 1172 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 CUZD1Q86UP6 607 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 PDPRQ8NCN5 879 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 AGR3Q8TD06 166 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 HMGB4Q8WW32 186 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 TCEAL3Q969E4 200 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 ZC3H10Q96K80 434 aaKnown RBP12.47□□□□□ -0.41
NELFE-209ENST00000488426 RDH14Q9HBH5 336 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 TXLNGQ9NUQ3 528 aa12.47□□□□□ -0.41
NELFE-209ENST00000488426 MBD1Q9UIS9 605 aaPredicted RBP12.47□□□□□ -0.41
NELFE-209ENST00000488426 CNOT6Q9ULM6 557 aaKnown RBP12.47□□□□□ -0.41
NELFE-209ENST00000488426 TCRBV21S2A2A0A5A6 115 aa12.46□□□□□ -0.41
NELFE-209ENST00000488426 TRPC5OSA6NMA1 111 aa12.46□□□□□ -0.41
NELFE-209ENST00000488426 GRID2O43424 1007 aa12.46□□□□□ -0.41
NELFE-209ENST00000488426 KIF1CO43896 1103 aaKnown RBP12.46□□□□□ -0.41
NELFE-209ENST00000488426 DIAPH2O60879 1101 aa12.46□□□□□ -0.41
NELFE-209ENST00000488426 TM7SF2O76062 418 aa12.46□□□□□ -0.41
NELFE-209ENST00000488426 SIX3O95343 332 aaPredicted RBP12.46□□□□□ -0.41
NELFE-209ENST00000488426 SERPINA6P08185 405 aa12.46□□□□□ -0.41
NELFE-209ENST00000488426 TBCCQ15814 346 aa12.46□□□□□ -0.41
NELFE-209ENST00000488426 CDKL4Q5MAI5 379 aa12.46□□□□□ -0.41
NELFE-209ENST00000488426 METTL21CQ5VZV1 264 aa12.46□□□□□ -0.41
NELFE-209ENST00000488426 ADAMTSL4Q6UY14 1074 aa12.46□□□□□ -0.41
NELFE-209ENST00000488426 RASGEF1AQ8N9B8 481 aa12.46□□□□□ -0.41
NELFE-209ENST00000488426 ZNF483Q8TF39 744 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms