RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 METTL3Q86U44 580 aaKnown RBP13.51□□□□□ -0.25
COPS7B-221ENST00000488111 IGFN1Q86VF2 1251 aa13.51□□□□□ -0.25
COPS7B-221ENST00000488111 PCDH20Q8N6Y1 951 aaKnown RBP13.51□□□□□ -0.25
COPS7B-221ENST00000488111 PAF1Q8N7H5 531 aa13.51□□□□□ -0.25
COPS7B-221ENST00000488111 BLOC1S5Q8TDH9 187 aa13.51□□□□□ -0.25
COPS7B-221ENST00000488111 FRS2Q8WU20 508 aa13.51□□□□□ -0.25
COPS7B-221ENST00000488111 ZNF669Q96BR6 464 aaPredicted RBP13.51□□□□□ -0.25
COPS7B-221ENST00000488111 EFHD2Q96C19 240 aaPredicted RBP13.51□□□□□ -0.25
COPS7B-221ENST00000488111 ZNF641Q96N77 438 aaPredicted RBP13.51□□□□□ -0.25
COPS7B-221ENST00000488111 C1orf50Q9BV19 199 aa13.51□□□□□ -0.25
COPS7B-221ENST00000488111 ZDHHC6Q9H6R6 413 aa13.51□□□□□ -0.25
COPS7B-221ENST00000488111 NMRAL1Q9HBL8 299 aa13.51□□□□□ -0.25
COPS7B-221ENST00000488111 ZDHHC2Q9UIJ5 367 aa13.51□□□□□ -0.25
COPS7B-221ENST00000488111 A0A096LPK6 155 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 PRORSD1PA6NEY8 169 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 TIPRLO75663 272 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 KAT7O95251 611 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 NDST3O95803 873 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 JUNP05412 331 aaKnown RBP13.5□□□□□ -0.25
COPS7B-221ENST00000488111 ERVK-10P10266 1014 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 NFKBIAP25963 317 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 SPRP35270 261 aaPredicted RBP13.5□□□□□ -0.25
COPS7B-221ENST00000488111 CCR10P46092 362 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 AP1S1P61966 158 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 BCL2L1Q07817 233 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 LRP8Q14114 963 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 TRIM16LQ309B1 348 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 ARL13AQ5H913 290 aaPredicted RBP13.5□□□□□ -0.25
COPS7B-221ENST00000488111 IER5LQ5T953 404 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 LIPMQ5VYY2 423 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 PTCRAQ6ISU1 281 aaPredicted RBP13.5□□□□□ -0.25
COPS7B-221ENST00000488111 ZYG11AQ6WRX3 759 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 OR2A12Q8NGT7 310 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 VOPP1Q96AW1 172 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 ISG20Q96AZ6 181 aaKnown RBP13.5□□□□□ -0.25
COPS7B-221ENST00000488111 CCDC138Q96M89 665 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 HGH1Q9BTY7 390 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 MROQ9BYG7 248 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 SLC2A6Q9UGQ3 507 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 AP3B1O00203 1094 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 EPOP01588 193 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 IL9P15248 144 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 ZNF182P17025 639 aaPredicted RBP13.5□□□□□ -0.25
COPS7B-221ENST00000488111 HLA-DPA1P20036 260 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 CCNA2P20248 432 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 GRIA4P48058 902 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 TMBIM6P55061 237 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 ST8SIA6P61647 398 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 ITGADQ13349 1161 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 SMAD2Q15796 467 aaKnown RBP13.5□□□□□ -0.25
COPS7B-221ENST00000488111 FNDC3BQ53EP0 1204 aaKnown RBP13.5□□□□□ -0.25
COPS7B-221ENST00000488111 PCID2Q5JVF3 399 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 TXNDC11Q6PKC3 985 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 KCTD8Q6ZWB6 473 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 ZC3H7AQ8IWR0 971 aaKnown RBP13.5□□□□□ -0.25
COPS7B-221ENST00000488111 RDH11Q8TC12 318 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 CERS2Q96G23 380 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 MAELQ96JY0 434 aaKnown RBP13.5□□□□□ -0.25
COPS7B-221ENST00000488111 ACOX2Q99424 681 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 CEP44Q9C0F1 390 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 NANOGQ9H9S0 305 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 HEBP1Q9NRV9 189 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 TCAF1Q9Y4C2 921 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 KCTD3Q9Y597 815 aa13.5□□□□□ -0.25
COPS7B-221ENST00000488111 COL4A3Q01955 1670 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 NARSO43776 548 aaKnown RBP13.49□□□□□ -0.25
COPS7B-221ENST00000488111 NOL3O60936 208 aaKnown RBP13.49□□□□□ -0.25
COPS7B-221ENST00000488111 CPNE6O95741 557 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 SLC4A1P02730 911 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 APOA4P06727 396 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 POLBP06746 335 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 SRPRAP08240 638 aaKnown RBP13.49□□□□□ -0.25
COPS7B-221ENST00000488111 CTPS1P17812 591 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 RALGDSQ12967 914 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 PTPRCAPQ14761 206 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 SPANXN3Q5MJ09 141 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 GPR153Q6NV75 609 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 ESRP1Q6NXG1 681 aaKnown RBP13.49□□□□□ -0.25
COPS7B-221ENST00000488111 PKN3Q6P5Z2 889 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 GALNT18Q6P9A2 607 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 EPHX4Q8IUS5 362 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 LSMEM2Q8N112 164 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 CBR4Q8N4T8 237 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 PPHLN1Q8NEY8 458 aaKnown RBP13.49□□□□□ -0.25
COPS7B-221ENST00000488111 OR13F1Q8NGS4 319 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 PPWD1Q96BP3 646 aaKnown RBP13.49□□□□□ -0.25
COPS7B-221ENST00000488111 MOCOSQ96EN8 888 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 CD320Q9NPF0 282 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 CACNA2D2Q9NY47 1150 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 HCN2Q9UL51 889 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 SPO11Q9Y5K1 396 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 KIF26AQ9ULI4 1882 aaPredicted RBP13.49□□□□□ -0.25
COPS7B-221ENST00000488111 COL6A3P12111 3177 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 CXorf51AA0A1B0GTR3 108 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 SAC3D1A6NKF1 404 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 ZNF839A8K0R7 811 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 ANKRD66B4E2M5 251 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 CCL22O00626 93 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 AURKAO14965 403 aa13.49□□□□□ -0.25
COPS7B-221ENST00000488111 EIF2S1P05198 315 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms