RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 DVL1O14640 695 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 NDUFS4O43181 175 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 PAPSS1O43252 624 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 BMP10O95393 424 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 TPOP07202 933 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 F7P08709 466 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 KRT19P08727 400 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 NMBRP28336 390 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 CASQ1P31415 396 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 MATR3P43243 847 aaKnown RBP eCLIP3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 SSR1P43307 286 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 GTF2A1P52655 376 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 DVL1P1P54792 670 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 MLLT10P55197 1068 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 SNRPEP62304 92 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 PSMC6P62333 389 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 ZNF672Q499Z4 452 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 FAM98BQ52LJ0 330 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 IGSF11Q5DX21 431 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 PDSS1Q5T2R2 415 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 C18orf65Q6ZTR6 163 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 C9orf139Q6ZV77 190 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 GET4Q7L5D6 327 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 DSG4Q86SJ6 1040 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 GALNT13Q8IUC8 556 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 KRT222Q8N1A0 295 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 SCML4Q8N228 414 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 MINDY1Q8N5J2 469 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 RFLNBQ8N5W9 214 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 METTL27Q8N6F8 245 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 IQUBQ8NA54 791 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 FAM184AQ8NB25 1140 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 OR13A1Q8NGR1 328 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 OR52I2Q8NH67 350 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 EPYCQ99645 322 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 APOL6Q9BWW8 343 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 SEMA6AQ9H2E6 1030 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 ZNF556Q9HAH1 456 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 KLHL1Q9NR64 748 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 CFDP1Q9UEE9 299 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 AMACRQ9UHK6 382 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 ICAM5Q9UMF0 924 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 ZNF148Q9UQR1 794 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 LRP12Q9Y561 859 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 FYCO1Q9BQS8 1478 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 PLXNC1O60486 1568 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 GCC2Q8IWJ2 1684 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 KIF27Q86VH2 1401 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 A0A1W2PS18 150 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 C15orf62A8K5M9 175 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 CAPN9O14815 690 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 ZWINTO95229 277 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 DNTTP04053 509 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 VPREB1P12018 145 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 NEFHP12036 1026 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 AHRP35869 848 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 LIG4P49917 911 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 KRTAP10-7P60409 375 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 PITX1P78337 314 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 RUNX1T1Q06455 604 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 CXCL9Q07325 125 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 TMEM266Q2M3C6 531 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 FAM133BQ5BKY9 247 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 BMP2KLQ5H9B9 411 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 SIRPB2Q5JXA9 342 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 CAVIN1Q6NZI2 390 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 GDPD4Q6W3E5 623 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 FOXL2NBQ6ZUU3 175 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 Q75L30 129 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 INTS8Q75QN2 995 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 ZNF534Q76KX8 674 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 CCDC91Q7Z6B0 441 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 LINC00346Q8IVM7 164 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 HSCBQ8IWL3 235 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 KBTBD3Q8NAB2 608 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 DMBX1Q8NFW5 382 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 RDM1Q8NG50 284 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 KIF18AQ8NI77 898 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 TBC1D16Q8TBP0 767 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 FAM210AQ96ND0 272 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 ZNF583Q96ND8 569 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 PKP4Q99569 1192 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 LRRC1Q9BTT6 524 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 DENND2DQ9H6A0 471 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 TRPC7Q9HCX4 862 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 TAB2Q9NYJ8 693 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 WSB2Q9NYS7 404 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 GIMAP2Q9UG22 337 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 HACL1Q9UJ83 578 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 FAF1Q9UNN5 650 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 YIPF1Q9Y548 306 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 MAGED1Q9Y5V3 778 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 FAM169AQ9Y6X4 670 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 V9GYY5 206 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 DENND4BO75064 1496 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 FHOD3Q2V2M9 1422 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 UHRF1BP1Q6BDS2 1440 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 FGD6Q6ZV73 1430 aa3.7□□□□□ -1.82
ECHDC1-217ENST00000488087 KDM5CP41229 1560 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 REREQ9P2R6 1566 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms