RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 HIST3H2AQ7L7L0 130 aa3.55□□□□□ -1.84
SMC4-219ENST00000487747 PIGZQ86VD9 579 aa3.55□□□□□ -1.84
SMC4-219ENST00000487747 ZNF354CQ86Y25 554 aa3.55□□□□□ -1.84
SMC4-219ENST00000487747 DIS3L2Q8IYB7 885 aaKnown RBP3.55□□□□□ -1.84
SMC4-219ENST00000487747 LINC00612Q8N6U2 182 aa3.55□□□□□ -1.84
SMC4-219ENST00000487747 TSPYL6Q8N831 410 aa3.55□□□□□ -1.84
SMC4-219ENST00000487747 OR1J1Q8NGS3 322 aa3.55□□□□□ -1.84
SMC4-219ENST00000487747 HGH1Q9BTY7 390 aa3.55□□□□□ -1.84
SMC4-219ENST00000487747 CLEC7AQ9BXN2 247 aa3.55□□□□□ -1.84
SMC4-219ENST00000487747 PREBQ9HCU5 417 aa3.55□□□□□ -1.84
SMC4-219ENST00000487747 A4GALTQ9NPC4 353 aa3.55□□□□□ -1.84
SMC4-219ENST00000487747 RRP7BPQ9NSQ0 103 aa3.55□□□□□ -1.84
SMC4-219ENST00000487747 SPIN1Q9Y657 262 aaPredicted RBP3.55□□□□□ -1.84
SMC4-219ENST00000487747 ZNF646O15015 1829 aaPredicted RBP3.55□□□□□ -1.84
SMC4-219ENST00000487747 MSGN1A6NI15 193 aa3.54□□□□□ -1.84
SMC4-219ENST00000487747 TMCC2O75069 709 aa3.54□□□□□ -1.84
SMC4-219ENST00000487747 GPIP06744 558 aa3.54□□□□□ -1.84
SMC4-219ENST00000487747 BSGP35613 385 aa3.54□□□□□ -1.84
SMC4-219ENST00000487747 HNF4AP41235 474 aa3.54□□□□□ -1.84
SMC4-219ENST00000487747 TFAP4Q01664 338 aa3.54□□□□□ -1.84
SMC4-219ENST00000487747 LRMPQ12912 555 aa3.54□□□□□ -1.84
SMC4-219ENST00000487747 NECTIN1Q15223 517 aa3.54□□□□□ -1.84
SMC4-219ENST00000487747 GCNT6Q5T4J0 391 aa3.54□□□□□ -1.84
SMC4-219ENST00000487747 Q6ZRP5 223 aa3.54□□□□□ -1.84
SMC4-219ENST00000487747 GPRIN3Q6ZVF9 776 aa3.54□□□□□ -1.84
SMC4-219ENST00000487747 ZNF554Q86TJ5 538 aa3.54□□□□□ -1.84
SMC4-219ENST00000487747 MYRIPQ8NFW9 859 aa3.54□□□□□ -1.84
SMC4-219ENST00000487747 C1orf74Q96LT6 269 aa3.54□□□□□ -1.84
SMC4-219ENST00000487747 DDOQ99489 341 aa3.54□□□□□ -1.84
SMC4-219ENST00000487747 ATP13A3Q9H7F0 1226 aa3.54□□□□□ -1.84
SMC4-219ENST00000487747 ERAP1Q9NZ08 941 aa3.54□□□□□ -1.84
SMC4-219ENST00000487747 NPAP1Q9NZP6 1156 aa3.54□□□□□ -1.84
SMC4-219ENST00000487747 FLRT3Q9NZU0 649 aa3.54□□□□□ -1.84
SMC4-219ENST00000487747 PDP2Q9P2J9 529 aa3.54□□□□□ -1.84
SMC4-219ENST00000487747 DNAH10OSP0CZ25 163 aa3.53□□□□□ -1.84
SMC4-219ENST00000487747 NMBRP28336 390 aa3.53□□□□□ -1.84
SMC4-219ENST00000487747 MAGEA11P43364 429 aa3.53□□□□□ -1.84
SMC4-219ENST00000487747 RPS3AP61247 264 aaKnown RBP3.53□□□□□ -1.84
SMC4-219ENST00000487747 GOLGA8DPQ0D2H9 430 aa3.53□□□□□ -1.84
SMC4-219ENST00000487747 GAGE2BQ13066 116 aa3.53□□□□□ -1.84
SMC4-219ENST00000487747 GAGE2EQ4V326 116 aa3.53□□□□□ -1.84
SMC4-219ENST00000487747 ACSM2BQ68CK6 577 aa3.53□□□□□ -1.84
SMC4-219ENST00000487747 FAM109BQ6ICB4 259 aaPredicted RBP3.53□□□□□ -1.84
SMC4-219ENST00000487747 GAGE2AQ6NT46 116 aa3.53□□□□□ -1.84
SMC4-219ENST00000487747 CFAP77Q6ZQR2 320 aa3.53□□□□□ -1.84
SMC4-219ENST00000487747 ERC1Q8IUD2 1116 aa3.53□□□□□ -1.84
SMC4-219ENST00000487747 Q8N377 158 aa3.53□□□□□ -1.84
SMC4-219ENST00000487747 MAPKAPK5-AS1Q8N8E1 139 aa3.53□□□□□ -1.84
SMC4-219ENST00000487747 ETNPPLQ8TBG4 499 aa3.53□□□□□ -1.84
SMC4-219ENST00000487747 OR2A14Q96R47 310 aa3.53□□□□□ -1.84
SMC4-219ENST00000487747 ABHD6Q9BV23 337 aa3.53□□□□□ -1.84
SMC4-219ENST00000487747 UBN1Q9NPG3 1134 aa3.53□□□□□ -1.84
SMC4-219ENST00000487747 GAGE2DQ9UEU5 116 aa3.53□□□□□ -1.84
SMC4-219ENST00000487747 EPHA6Q9UF33 1036 aa3.53□□□□□ -1.84
SMC4-219ENST00000487747 TP53TG3Q9ULZ0 132 aa3.53□□□□□ -1.84
SMC4-219ENST00000487747 PRSS51A0A1B0GVH4 220 aa3.52□□□□□ -1.85
SMC4-219ENST00000487747 EPM2AB3EWF7 344 aa3.52□□□□□ -1.85
SMC4-219ENST00000487747 E9PI62 339 aa3.52□□□□□ -1.85
SMC4-219ENST00000487747 ZNF195O14628 629 aa3.52□□□□□ -1.85
SMC4-219ENST00000487747 PIGNO95427 931 aa3.52□□□□□ -1.85
SMC4-219ENST00000487747 EIF2S1P05198 315 aaKnown RBP3.52□□□□□ -1.85
SMC4-219ENST00000487747 EFNA1P20827 205 aaPredicted RBP3.52□□□□□ -1.85
SMC4-219ENST00000487747 CCR9P51686 369 aa3.52□□□□□ -1.85
SMC4-219ENST00000487747 PNRC1Q12796 327 aaPredicted RBP3.52□□□□□ -1.85
SMC4-219ENST00000487747 RIGQ13278 110 aa3.52□□□□□ -1.85
SMC4-219ENST00000487747 EIF4A2Q14240 407 aaKnown RBP3.52□□□□□ -1.85
SMC4-219ENST00000487747 KLHL26Q53HC5 615 aa3.52□□□□□ -1.85
SMC4-219ENST00000487747 C2CD6Q53TS8 623 aa3.52□□□□□ -1.85
SMC4-219ENST00000487747 ADALQ6DHV7 355 aa3.52□□□□□ -1.85
SMC4-219ENST00000487747 PTAR1Q7Z6K3 402 aaPredicted RBP3.52□□□□□ -1.85
SMC4-219ENST00000487747 LRRTM1Q86UE6 522 aa3.52□□□□□ -1.85
SMC4-219ENST00000487747 LACC1Q8IV20 430 aa3.52□□□□□ -1.85
SMC4-219ENST00000487747 CPXCR1Q8N123 301 aa3.52□□□□□ -1.85
SMC4-219ENST00000487747 CPSF7Q8N684 471 aaKnown RBP3.52□□□□□ -1.85
SMC4-219ENST00000487747 TBC1D16Q8TBP0 767 aa3.52□□□□□ -1.85
SMC4-219ENST00000487747 SUSD6Q92537 303 aa3.52□□□□□ -1.85
SMC4-219ENST00000487747 CENPTQ96BT3 561 aa3.52□□□□□ -1.85
SMC4-219ENST00000487747 NUDCD1Q96RS6 583 aa3.52□□□□□ -1.85
SMC4-219ENST00000487747 LRRC61Q9BV99 259 aa3.52□□□□□ -1.85
SMC4-219ENST00000487747 PAG1Q9NWQ8 432 aa3.52□□□□□ -1.85
SMC4-219ENST00000487747 PNMA2Q9UL42 364 aa3.52□□□□□ -1.85
SMC4-219ENST00000487747 MOB4Q9Y3A3 225 aa3.52□□□□□ -1.85
SMC4-219ENST00000487747 ANGPTL3Q9Y5C1 460 aa3.52□□□□□ -1.85
SMC4-219ENST00000487747 LOC101059948A0A1B0GTJ6 334 aa3.51□□□□□ -1.85
SMC4-219ENST00000487747 A0A1W2PRB8 838 aa3.51□□□□□ -1.85
SMC4-219ENST00000487747 CLEC3BP05452 202 aa3.51□□□□□ -1.85
SMC4-219ENST00000487747 DHX8Q14562 1220 aaKnown RBP3.51□□□□□ -1.85
SMC4-219ENST00000487747 E2F5Q15329 346 aa3.51□□□□□ -1.85
SMC4-219ENST00000487747 SGSM1Q2NKQ1 1148 aa3.51□□□□□ -1.85
SMC4-219ENST00000487747 TAF1BQ53T94 588 aaPredicted RBP3.51□□□□□ -1.85
SMC4-219ENST00000487747 RARS2Q5T160 578 aaKnown RBP3.51□□□□□ -1.85
SMC4-219ENST00000487747 INTS11Q5TA45 600 aaKnown RBP3.51□□□□□ -1.85
SMC4-219ENST00000487747 GKAP1Q5VSY0 366 aaPredicted RBP3.51□□□□□ -1.85
SMC4-219ENST00000487747 RSRC2Q7L4I2 434 aaKnown RBP3.51□□□□□ -1.85
SMC4-219ENST00000487747 HACE1Q8IYU2 909 aa3.51□□□□□ -1.85
SMC4-219ENST00000487747 RAB42Q8N4Z0 105 aa3.51□□□□□ -1.85
SMC4-219ENST00000487747 NSL1Q96IY1 281 aa3.51□□□□□ -1.85
SMC4-219ENST00000487747 C1QTNF1Q9BXJ1 281 aa3.51□□□□□ -1.85
SMC4-219ENST00000487747 UPF3AQ9H1J1 476 aaKnown RBP3.51□□□□□ -1.85
SMC4-219ENST00000487747 PIAS3Q9Y6X2 628 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms