RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 ZW10O43264 779 aa19.12■□□□□ 0.65
SEC22A-208ENST00000487572 PIAS1O75925 651 aa19.12■□□□□ 0.65
SEC22A-208ENST00000487572 MT-CO3P00414 261 aa19.12■□□□□ 0.65
SEC22A-208ENST00000487572 AOAHP28039 575 aa19.12■□□□□ 0.65
SEC22A-208ENST00000487572 ECHS1P30084 290 aa19.12■□□□□ 0.65
SEC22A-208ENST00000487572 GPR3P46089 330 aa19.12■□□□□ 0.65
SEC22A-208ENST00000487572 LEPRP48357 1165 aaKnown RBP19.12■□□□□ 0.65
SEC22A-208ENST00000487572 GPX6P59796 221 aa19.12■□□□□ 0.65
SEC22A-208ENST00000487572 CUL1Q13616 776 aa19.12■□□□□ 0.65
SEC22A-208ENST00000487572 GPR18Q14330 331 aa19.12■□□□□ 0.65
SEC22A-208ENST00000487572 NR1D2Q14995 579 aa19.12■□□□□ 0.65
SEC22A-208ENST00000487572 ZNF549Q6P9A3 640 aa19.12■□□□□ 0.65
SEC22A-208ENST00000487572 KIAA0408Q6ZU52 694 aa19.12■□□□□ 0.65
SEC22A-208ENST00000487572 C3orf62Q6ZUJ4 267 aa19.12■□□□□ 0.65
SEC22A-208ENST00000487572 OTOAQ7RTW8 1153 aa19.12■□□□□ 0.65
SEC22A-208ENST00000487572 PDZD3Q86UT5 571 aa19.12■□□□□ 0.65
SEC22A-208ENST00000487572 VRK3Q8IV63 474 aa19.12■□□□□ 0.65
SEC22A-208ENST00000487572 JPH3Q8WXH2 748 aaPredicted RBP19.12■□□□□ 0.65
SEC22A-208ENST00000487572 NDNQ99608 321 aa19.12■□□□□ 0.65
SEC22A-208ENST00000487572 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.12■□□□□ 0.65
SEC22A-208ENST00000487572 SLC40A1Q9NP59 571 aa19.12■□□□□ 0.65
SEC22A-208ENST00000487572 MOCS1Q9NZB8 636 aa19.12■□□□□ 0.65
SEC22A-208ENST00000487572 GALPQ9UBC7 116 aa19.12■□□□□ 0.65
SEC22A-208ENST00000487572 TSR3Q9UJK0 312 aaKnown RBP19.12■□□□□ 0.65
SEC22A-208ENST00000487572 KLK13Q9UKR3 277 aa19.12■□□□□ 0.65
SEC22A-208ENST00000487572 NFU1Q9UMS0 254 aa19.12■□□□□ 0.65
SEC22A-208ENST00000487572 IGHV1OR21-1A0A087WYE8 117 aa19.11■□□□□ 0.65
SEC22A-208ENST00000487572 TCRBV9S1A1TA0A576 114 aa19.11■□□□□ 0.65
SEC22A-208ENST00000487572 AHSGP02765 367 aa19.11■□□□□ 0.65
SEC22A-208ENST00000487572 JUPP14923 745 aa19.11■□□□□ 0.65
SEC22A-208ENST00000487572 GABRB3P28472 473 aa19.11■□□□□ 0.65
SEC22A-208ENST00000487572 PLOD1Q02809 727 aaPredicted RBP19.11■□□□□ 0.65
SEC22A-208ENST00000487572 MAP9Q49MG5 647 aa19.11■□□□□ 0.65
SEC22A-208ENST00000487572 RBM44Q6ZP01 1051 aaKnown RBP19.11■□□□□ 0.65
SEC22A-208ENST00000487572 TMEM26Q6ZUK4 368 aa19.11■□□□□ 0.65
SEC22A-208ENST00000487572 USP53Q70EK8 1073 aa19.11■□□□□ 0.65
SEC22A-208ENST00000487572 GALNT15Q8N3T1 639 aa19.11■□□□□ 0.65
SEC22A-208ENST00000487572 WDR48Q8TAF3 677 aa19.11■□□□□ 0.65
SEC22A-208ENST00000487572 ATXN7L3BQ96GX2 97 aa19.11■□□□□ 0.65
SEC22A-208ENST00000487572 AHCYL2Q96HN2 611 aaKnown RBP19.11■□□□□ 0.65
SEC22A-208ENST00000487572 FERD3LQ96RJ6 166 aa19.11■□□□□ 0.65
SEC22A-208ENST00000487572 SCNM1Q9BWG6 230 aa19.11■□□□□ 0.65
SEC22A-208ENST00000487572 RDH14Q9HBH5 336 aa19.11■□□□□ 0.65
SEC22A-208ENST00000487572 LRRC4CQ9HCJ2 640 aa19.11■□□□□ 0.65
SEC22A-208ENST00000487572 CLCA2Q9UQC9 943 aa19.11■□□□□ 0.65
SEC22A-208ENST00000487572 PSAT1Q9Y617 370 aa19.11■□□□□ 0.65
SEC22A-208ENST00000487572 SPTBN2O15020 2390 aa19.1■□□□□ 0.65
SEC22A-208ENST00000487572 NTN3O00634 580 aaPredicted RBP19.1■□□□□ 0.65
SEC22A-208ENST00000487572 KPNA5O15131 536 aa19.1■□□□□ 0.65
SEC22A-208ENST00000487572 GSTA2P09210 222 aa19.1■□□□□ 0.65
SEC22A-208ENST00000487572 CD151P48509 253 aa19.1■□□□□ 0.65
SEC22A-208ENST00000487572 PLCL1Q15111 1095 aa19.1■□□□□ 0.65
SEC22A-208ENST00000487572 CDCP2Q5VXM1 449 aa19.1■□□□□ 0.65
SEC22A-208ENST00000487572 CEP128Q6ZU80 1094 aa19.1■□□□□ 0.65
SEC22A-208ENST00000487572 TMPRSS7Q7RTY8 843 aa19.1■□□□□ 0.65
SEC22A-208ENST00000487572 STRA8Q7Z7C7 330 aa19.1■□□□□ 0.65
SEC22A-208ENST00000487572 TMPRSS12Q86WS5 348 aa19.1■□□□□ 0.65
SEC22A-208ENST00000487572 RBM12BQ8IXT5 1001 aaKnown RBP19.1■□□□□ 0.65
SEC22A-208ENST00000487572 SLC22A15Q8IZD6 547 aa19.1■□□□□ 0.65
SEC22A-208ENST00000487572 ZBTB2Q8N680 514 aa19.1■□□□□ 0.65
SEC22A-208ENST00000487572 SIDT2Q8NBJ9 832 aaKnown RBP19.1■□□□□ 0.65
SEC22A-208ENST00000487572 PHC3Q8NDX5 983 aa19.1■□□□□ 0.65
SEC22A-208ENST00000487572 OR10G6Q8NH81 332 aa19.1■□□□□ 0.65
SEC22A-208ENST00000487572 SKA2Q8WVK7 121 aaPredicted RBP19.1■□□□□ 0.65
SEC22A-208ENST00000487572 TFGQ92734 400 aaPredicted RBP19.1■□□□□ 0.65
SEC22A-208ENST00000487572 AARSD1Q9BTE6 412 aaKnown RBP19.1■□□□□ 0.65
SEC22A-208ENST00000487572 SMYD2Q9NRG4 433 aa19.1■□□□□ 0.65
SEC22A-208ENST00000487572 CDYLQ9Y232 598 aa19.1■□□□□ 0.65
SEC22A-208ENST00000487572 HEBP2Q9Y5Z4 205 aa19.1■□□□□ 0.65
SEC22A-208ENST00000487572 COLEC10Q9Y6Z7 277 aa19.1■□□□□ 0.65
SEC22A-208ENST00000487572 PIKFYVEQ9Y2I7 2098 aa19.1■□□□□ 0.65
SEC22A-208ENST00000487572 LILRA5A6NI73 299 aa19.09■□□□□ 0.65
SEC22A-208ENST00000487572 D6RAR5 112 aa19.09■□□□□ 0.65
SEC22A-208ENST00000487572 CSO75390 466 aaKnown RBP19.09■□□□□ 0.65
SEC22A-208ENST00000487572 GPC4O75487 556 aa19.09■□□□□ 0.65
SEC22A-208ENST00000487572 TCEA3O75764 348 aa19.09■□□□□ 0.65
SEC22A-208ENST00000487572 TYRP1P17643 537 aa19.09■□□□□ 0.65
SEC22A-208ENST00000487572 CD1CP29017 333 aa19.09■□□□□ 0.65
SEC22A-208ENST00000487572 EPHA4P54764 986 aa19.09■□□□□ 0.65
SEC22A-208ENST00000487572 ABRQ12979 859 aa19.09■□□□□ 0.65
SEC22A-208ENST00000487572 TARDBPQ13148 414 aaKnown RBP eCLIP19.09■□□□□ 0.65
SEC22A-208ENST00000487572 KYNUQ16719 465 aa19.09■□□□□ 0.65
SEC22A-208ENST00000487572 RBM20Q5T481 1227 aaKnown RBP19.09■□□□□ 0.65
SEC22A-208ENST00000487572 SPNS2Q8IVW8 549 aa19.09■□□□□ 0.65
SEC22A-208ENST00000487572 GPATCH11Q8N954 259 aa19.09■□□□□ 0.65
SEC22A-208ENST00000487572 CFAP61Q8NHU2 1237 aa19.09■□□□□ 0.65
SEC22A-208ENST00000487572 CDKL2Q92772 493 aa19.09■□□□□ 0.65
SEC22A-208ENST00000487572 DEPDC7Q96QD5 511 aa19.09■□□□□ 0.65
SEC22A-208ENST00000487572 NUDT22Q9BRQ3 303 aa19.09■□□□□ 0.65
SEC22A-208ENST00000487572 HGH1Q9BTY7 390 aa19.09■□□□□ 0.65
SEC22A-208ENST00000487572 TSPYL1Q9H0U9 437 aa19.09■□□□□ 0.65
SEC22A-208ENST00000487572 UCK1Q9HA47 277 aa19.09■□□□□ 0.65
SEC22A-208ENST00000487572 NINJ2Q9NZG7 142 aa19.09■□□□□ 0.65
SEC22A-208ENST00000487572 WASF3Q9UPY6 502 aa19.09■□□□□ 0.65
SEC22A-208ENST00000487572 ASF1AQ9Y294 204 aa19.09■□□□□ 0.65
SEC22A-208ENST00000487572 COMMD10Q9Y6G5 202 aa19.09■□□□□ 0.65
SEC22A-208ENST00000487572 ASXL3Q9C0F0 2248 aa19.08■□□□□ 0.65
SEC22A-208ENST00000487572 RP1P56715 2156 aa19.08■□□□□ 0.65
SEC22A-208ENST00000487572 CXorf49A8MYA2 514 aaPredicted RBP19.08■□□□□ 0.64
SEC22A-208ENST00000487572 DUX1O43812 170 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms