RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 HEATR5BQ9P2D3 2071 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 PRAMEF33A0A0G2JMD5 474 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 IGHV5-10-1A0A0J9YXX1 117 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 H3BMM5 538 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 HGSO14964 777 aaPredicted RBP12.85□□□□□ -0.35
SF1-216ENST00000486867 PFDN6O15212 129 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 NDUFS3O75489 264 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 BANF1O75531 89 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 ESR1P03372 595 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 HOXB3P14651 431 aaPredicted RBP12.85□□□□□ -0.35
SF1-216ENST00000486867 CCR7P32248 378 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 CAPZBP47756 277 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 ARL4CP56559 192 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 BOP1Q14137 746 aaKnown RBP12.85□□□□□ -0.35
SF1-216ENST00000486867 CTSL3PQ5NE16 218 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 ARHGAP22Q7Z5H3 698 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 ZNF761Q86XN6 746 aaPredicted RBP12.85□□□□□ -0.35
SF1-216ENST00000486867 SLC22A15Q8IZD6 547 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 MMGT1Q8N4V1 131 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 WDR36Q8NI36 951 aaKnown RBP12.85□□□□□ -0.35
SF1-216ENST00000486867 LKAAEAR1Q8TD35 194 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 CALML6Q8TD86 181 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 C12orf66Q96MD2 445 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 PWWP2AQ96N64 755 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 CNTNAP3BQ96NU0 1288 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 TSSK1BQ9BXA7 367 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 TBC1D10AQ9BXI6 508 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 CNTNAP3Q9BZ76 1288 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 B3GNT4Q9C0J1 378 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 RAB17Q9H0T7 212 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 SEMA6CQ9H3T2 930 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 MVB12BQ9H7P6 319 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 RDH14Q9HBH5 336 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 ASCL3Q9NQ33 180 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 SEMA5BQ9P283 1151 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 SLC24A2Q9UI40 661 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 GNPTGQ9UJJ9 305 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 SNX24Q9Y343 169 aa12.85□□□□□ -0.35
SF1-216ENST00000486867 DSPP15924 2871 aaKnown RBP12.85□□□□□ -0.35
SF1-216ENST00000486867 CDRT15L2A8MXV6 281 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 GOLGA8KD6RF30 607 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 GOLGA8TH3BQL2 631 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 KPNA5O15131 536 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 EIF3HO15372 352 aaKnown RBP eCLIP12.84□□□□□ -0.35
SF1-216ENST00000486867 UBXN7O94888 489 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 ANKRD34CP0C6C1 535 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 SPTBP11277 2137 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 ATP5DP30049 168 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 ELK3P41970 407 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 PREPP48147 710 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 BBS9Q3SYG4 887 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 AMZ1Q400G9 498 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 MAP9Q49MG5 647 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 ZNF789Q5FWF6 425 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 NKAIN2Q5VXU1 208 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 ZNF470Q6ECI4 717 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 ZNF449Q6P9G9 518 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 USP53Q70EK8 1073 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 LSMEM2Q8N112 164 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 C2CD4AQ8NCU7 369 aaPredicted RBP12.84□□□□□ -0.35
SF1-216ENST00000486867 KIF18AQ8NI77 898 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 ASZ1Q8WWH4 475 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 ELMO1Q92556 727 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 ART4Q93070 314 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 PANX3Q96QZ0 392 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 FAM167BQ9BTA0 163 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 FOXP3Q9BZS1 431 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 TRIM31Q9BZY9 425 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 STRADBQ9C0K7 418 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 IL1RAPL1Q9NZN1 696 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 KLHL42Q9P2K6 505 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 FBXO5Q9UKT4 447 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 MED16Q9Y2X0 877 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 COLEC10Q9Y6Z7 277 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 PTPRQQ9UMZ3 2332 aa12.84□□□□□ -0.35
SF1-216ENST00000486867 CACNA1BQ00975 2339 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 SEC16AO15027 2179 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 IQCF5A8MTL0 148 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 IFRD1O00458 451 aaPredicted RBP12.83□□□□□ -0.36
SF1-216ENST00000486867 PLD2O14939 933 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 TOX3O15405 576 aaPredicted RBP12.83□□□□□ -0.36
SF1-216ENST00000486867 SLC1A2P43004 574 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 LEPRP48357 1165 aaKnown RBP12.83□□□□□ -0.36
SF1-216ENST00000486867 ERVPABLB-1P60509 514 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 GABREP78334 506 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 MRPS25P82663 173 aaKnown RBP12.83□□□□□ -0.36
SF1-216ENST00000486867 CAV1Q03135 178 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 THOC5Q13769 683 aaKnown RBP12.83□□□□□ -0.36
SF1-216ENST00000486867 C16orf72Q14CZ0 275 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 PLEKHS1Q5SXH7 462 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 DUS1LQ6P1R4 473 aaKnown RBP12.83□□□□□ -0.36
SF1-216ENST00000486867 ZDHHC24Q6UX98 284 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 UNC5AQ6ZN44 842 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 KIAA0408Q6ZU52 694 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 RAB11FIP2Q7L804 512 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 CLEC14AQ86T13 490 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 KCNMB4Q86W47 210 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 PLXDC1Q8IUK5 500 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 DENND6AQ8IWF6 608 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 UNC5BQ8IZJ1 945 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms