RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 ZNF148Q9UQR1 794 aa10.21□□□□□ -0.77
CPSF4-212ENST00000482251 PRSS21Q9Y6M0 314 aa10.21□□□□□ -0.77
CPSF4-212ENST00000482251 CFAP46Q8IYW2 2715 aa10.21□□□□□ -0.78
CPSF4-212ENST00000482251 IGLV3-16A0A075B6K0 115 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 TRBV5-4A0A0C4DH59 114 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 CCDC162PA2VCL2 907 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 B8ZZF3 427 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 H7C0S8 307 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 SPAG6O75602 509 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 ITGB6P18564 788 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 FOXN2P32314 431 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 KPNA2P52292 529 aaKnown RBP10.2□□□□□ -0.78
CPSF4-212ENST00000482251 TERF1P54274 439 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 CSE1LP55060 971 aaKnown RBP10.2□□□□□ -0.78
CPSF4-212ENST00000482251 POLE2P56282 527 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 GSDMDP57764 484 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 ABHD18Q0P651 414 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 PRKG2Q13237 762 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 BOP1Q14137 746 aaKnown RBP10.2□□□□□ -0.78
CPSF4-212ENST00000482251 RPS6KA1Q15418 735 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 GPR19Q15760 415 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 DEFB109BQ30KR1 87 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 GPR33Q49SQ1 333 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 CAPRIN2Q6IMN6 1127 aaKnown RBP10.2□□□□□ -0.78
CPSF4-212ENST00000482251 PWWP2BQ6NUJ5 590 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 C6orf15Q6UXA7 325 aaPredicted RBP10.2□□□□□ -0.78
CPSF4-212ENST00000482251 RNF10Q8N5U6 811 aaKnown RBP10.2□□□□□ -0.78
CPSF4-212ENST00000482251 CCDC89Q8N998 374 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 PHC3Q8NDX5 983 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 STYXQ8WUJ0 223 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 UBXN4Q92575 508 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 SLC45A3Q96JT2 553 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 SLC41A2Q96JW4 573 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 FERD3LQ96RJ6 166 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 RUFY1Q96T51 708 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 CCM2Q9BSQ5 444 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 TLR10Q9BXR5 811 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 FAM117AQ9C073 453 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 RAB33BQ9H082 229 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 KLHL25Q9H0H3 589 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 OR52A5Q9H2C5 316 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 XKR8Q9H6D3 395 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 VPS37BQ9H9H4 285 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 RARRES3Q9UL19 164 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 BSNQ9UPA5 3926 aa10.2□□□□□ -0.78
CPSF4-212ENST00000482251 HEMK1Q9Y5R4 338 aaPredicted RBP10.2□□□□□ -0.78
CPSF4-212ENST00000482251 FLNBO75369 2602 aaKnown RBP10.2□□□□□ -0.78
CPSF4-212ENST00000482251 MROH6A6NGR9 719 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 IFRD1O00458 451 aaPredicted RBP10.19□□□□□ -0.78
CPSF4-212ENST00000482251 BTN3A1O00481 513 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 ARHGAP6O43182 974 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 PSMD3O43242 534 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 OR1I1O60431 355 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 KATNA1O75449 491 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 GAS8O95995 478 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 GOT2P00505 430 aaKnown RBP10.19□□□□□ -0.78
CPSF4-212ENST00000482251 NTRK1P04629 796 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 APRTP07741 180 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 FGF5P12034 268 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 TCN2P20062 427 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 CDH3P22223 829 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 CDH17Q12864 832 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 PRKAA1Q13131 559 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 IL11RAQ14626 422 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 ZNF658BQ4V348 819 aaPredicted RBP10.19□□□□□ -0.78
CPSF4-212ENST00000482251 SYTL3Q4VX76 610 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 MEI1Q5TIA1 1274 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 PRAMEF17Q5VTA0 474 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 LINC00523Q86TU6 105 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 TMEM135Q86UB9 458 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 ACVR1CQ8NER5 493 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 OR52E1Q8NGJ3 308 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 OR13J1Q8NGT2 312 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 CT55Q8WUE5 264 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 HEXDCQ8WVB3 486 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 LCN9Q8WX39 176 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 ELMO1Q92556 727 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 ZNF778Q96MU6 729 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 TRIT1Q9H3H1 467 aaKnown RBP10.19□□□□□ -0.78
CPSF4-212ENST00000482251 SRMSQ9H3Y6 488 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 PDE7BQ9NP56 450 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 FGF21Q9NSA1 209 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 COLEC10Q9Y6Z7 277 aa10.19□□□□□ -0.78
CPSF4-212ENST00000482251 PIKFYVEQ9Y2I7 2098 aa10.18□□□□□ -0.78
CPSF4-212ENST00000482251 HEATR9A2RTY3 570 aa10.18□□□□□ -0.78
CPSF4-212ENST00000482251 KLHL33A6NCF5 533 aa10.18□□□□□ -0.78
CPSF4-212ENST00000482251 J3QKU1 62 aa10.18□□□□□ -0.78
CPSF4-212ENST00000482251 BTN3A3O00478 584 aa10.18□□□□□ -0.78
CPSF4-212ENST00000482251 CCDC175P0C221 793 aa10.18□□□□□ -0.78
CPSF4-212ENST00000482251 ATXN8OSP0DMR3 200 aa10.18□□□□□ -0.78
CPSF4-212ENST00000482251 PVRP15151 417 aa10.18□□□□□ -0.78
CPSF4-212ENST00000482251 NDUFS1P28331 727 aa10.18□□□□□ -0.78
CPSF4-212ENST00000482251 STIP1P31948 543 aaKnown RBP10.18□□□□□ -0.78
CPSF4-212ENST00000482251 CXCR5P32302 372 aa10.18□□□□□ -0.78
CPSF4-212ENST00000482251 FDFT1P37268 417 aa10.18□□□□□ -0.78
CPSF4-212ENST00000482251 CCR10P46092 362 aa10.18□□□□□ -0.78
CPSF4-212ENST00000482251 SESN2P58004 480 aaPredicted RBP10.18□□□□□ -0.78
CPSF4-212ENST00000482251 RPS18P62269 152 aaKnown RBP10.18□□□□□ -0.78
CPSF4-212ENST00000482251 CRADDP78560 199 aa10.18□□□□□ -0.78
CPSF4-212ENST00000482251 HSD11B2P80365 405 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms