RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 PRAMEF10O60809 474 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 CYP7B1O75881 506 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 PGLSO95336 258 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 MBD3O95983 291 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 CPP00450 1065 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 PRKCGP05129 697 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 HGFP14210 728 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 ITIH1P19827 911 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 CA4P22748 312 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 CD1CP29017 333 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 ALDH4A1P30038 563 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 CSTF2P33240 577 aaKnown RBP eCLIP6.4□□□□□ -1.383e-7■■■■□ 20.5
LRCH3-216ENST00000481048 ADCY8P40145 1251 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 TSPAN7P41732 249 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 ECI1P42126 302 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 MMP13P45452 471 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 GPR1P46091 355 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 FASLGP48023 281 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 MAPK10P53779 464 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 RPL26P61254 145 aaKnown RBP6.4□□□□□ -1.38
LRCH3-216ENST00000481048 BIRC2Q13490 618 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 TGIF1Q15583 401 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 ASIC2Q16515 512 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 HADHQ16836 314 aaKnown RBP6.4□□□□□ -1.38
LRCH3-216ENST00000481048 MAP9Q49MG5 647 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 CCDC122Q5T0U0 273 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 CCDC183Q5T5S1 534 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 KCTD16Q68DU8 428 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 RAET1GQ6H3X3 334 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 TIGD7Q6NT04 549 aaPredicted RBP6.4□□□□□ -1.38
LRCH3-216ENST00000481048 ARHGAP36Q6ZRI8 547 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 Q6ZVL8 140 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 TMPRSS9Q7Z410 1059 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 PALM2Q8IXS6 379 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 KBTBD2Q8IY47 623 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 NAGSQ8N159 534 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 PELI3Q8N2H9 469 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 ATPAF2Q8N5M1 289 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 NIPA2Q8N8Q9 360 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 EXD3Q8N9H8 876 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 AVL9Q8NBF6 648 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 EXD1Q8NHP7 514 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 CCL4L1Q8NHW4 92 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 PDCD6IPQ8WUM4 868 aaKnown RBP6.4□□□□□ -1.38
LRCH3-216ENST00000481048 PIH1D2Q8WWB5 315 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 SYN2Q92777 582 aaPredicted RBP6.4□□□□□ -1.38
LRCH3-216ENST00000481048 SH3KBP1Q96B97 665 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 ZNF653Q96CK0 615 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 IQCDQ96DY2 449 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 NSMCE3Q96MG7 304 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 CATSPER2Q96P56 530 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 CSPG4P5Q96PW8 444 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 TEFMQ96QE5 360 aaKnown RBP6.4□□□□□ -1.38
LRCH3-216ENST00000481048 ZPBPQ9BS86 351 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.4□□□□□ -1.38
LRCH3-216ENST00000481048 EFHD1Q9BUP0 239 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 ZNF747Q9BV97 191 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 DDA1Q9BW61 102 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 VPS11Q9H270 941 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 GEMIN8Q9NWZ8 242 aaKnown RBP6.4□□□□□ -1.38
LRCH3-216ENST00000481048 PDP2Q9P2J9 529 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 IL17BQ9UHF5 180 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 IP6K2Q9UHH9 426 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 LCMT1Q9UIC8 334 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 TUBD1Q9UJT1 453 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 FBXL7Q9UJT9 491 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 RPL26L1Q9UNX3 145 aaKnown RBP6.4□□□□□ -1.38
LRCH3-216ENST00000481048 CNTRLQ7Z7A1 2325 aa6.4□□□□□ -1.38
LRCH3-216ENST00000481048 PIKFYVEQ9Y2I7 2098 aa6.4□□□□□ -1.39
LRCH3-216ENST00000481048 IGHV1OR21-1A0A087WYE8 117 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 TCRBV5S2A0A599 114 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 RGSL1A5PLK6 1076 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 OR5K4A6NMS3 321 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 A8MX80 341 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 MYO1FO00160 1098 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 CYR61O00622 381 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 PPM1DO15297 605 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 TBX1O43435 398 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 FZD7O75084 574 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 PPFIA2O75334 1257 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 SNRPB2P08579 225 aaKnown RBP6.39□□□□□ -1.39
LRCH3-216ENST00000481048 THRAP10827 490 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 FGF3P11487 239 aaPredicted RBP6.39□□□□□ -1.39
LRCH3-216ENST00000481048 SLC2A4P14672 509 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 ITGB6P18564 788 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 LHCGRP22888 699 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 CCNCP24863 283 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 IL1R2P27930 398 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 HOXC12P31275 282 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 MAN1A1P33908 653 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 ETV5P41161 510 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 GARSP41250 739 aaKnown RBP6.39□□□□□ -1.39
LRCH3-216ENST00000481048 GNPDA1P46926 289 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 MAZP56270 477 aaKnown RBP6.39□□□□□ -1.39
LRCH3-216ENST00000481048 OR1D5P58170 312 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 TRAF2Q12933 501 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 NFATC3Q12968 1075 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 KCNAB2Q13303 367 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 C16orf72Q14CZ0 275 aa6.39□□□□□ -1.39
LRCH3-216ENST00000481048 TCEA2Q15560 299 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms