RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 SYT1P21579 422 aa11.45□□□□□ -0.58
USP11-208ENST00000480104 RENBPP51606 427 aa11.45□□□□□ -0.58
USP11-208ENST00000480104 PMS1P54277 932 aaKnown RBP11.45□□□□□ -0.58
USP11-208ENST00000480104 FKBP3Q00688 224 aaKnown RBP11.45□□□□□ -0.58
USP11-208ENST00000480104 CBLBQ13191 982 aa11.45□□□□□ -0.58
USP11-208ENST00000480104 RFTN1Q14699 578 aaPredicted RBP11.45□□□□□ -0.58
USP11-208ENST00000480104 PCBP2Q15366 365 aaKnown RBP eCLIP11.45□□□□□ -0.58
USP11-208ENST00000480104 RBBP7Q16576 425 aa11.45□□□□□ -0.58
USP11-208ENST00000480104 CCDC14Q49A88 953 aa11.45□□□□□ -0.58
USP11-208ENST00000480104 Q5PR19 223 aa11.45□□□□□ -0.58
USP11-208ENST00000480104 ARMC12Q5T9G4 340 aa11.45□□□□□ -0.58
USP11-208ENST00000480104 PODNL1Q6PEZ8 512 aa11.45□□□□□ -0.58
USP11-208ENST00000480104 CDHR3Q6ZTQ4 885 aa11.45□□□□□ -0.58
USP11-208ENST00000480104 CCDC71Q8IV32 467 aaPredicted RBP11.45□□□□□ -0.58
USP11-208ENST00000480104 ULK2Q8IYT8 1036 aa11.45□□□□□ -0.58
USP11-208ENST00000480104 C3orf20Q8ND61 904 aa11.45□□□□□ -0.58
USP11-208ENST00000480104 CCDC110Q8TBZ0 833 aa11.45□□□□□ -0.58
USP11-208ENST00000480104 GPT2Q8TD30 523 aa11.45□□□□□ -0.58
USP11-208ENST00000480104 ZFPM2Q8WW38 1151 aa11.45□□□□□ -0.58
USP11-208ENST00000480104 HDAC10Q969S8 669 aa11.45□□□□□ -0.58
USP11-208ENST00000480104 NUDCD1Q96RS6 583 aa11.45□□□□□ -0.58
USP11-208ENST00000480104 TRIM51Q9BSJ1 452 aa11.45□□□□□ -0.58
USP11-208ENST00000480104 METTL5Q9NRN9 209 aaKnown RBP11.45□□□□□ -0.58
USP11-208ENST00000480104 GPR89AB7ZAQ6 455 aa11.44□□□□□ -0.58
USP11-208ENST00000480104 H3BMH7 237 aa11.44□□□□□ -0.58
USP11-208ENST00000480104 FGF10O15520 208 aaPredicted RBP11.44□□□□□ -0.58
USP11-208ENST00000480104 OR2B3O76000 313 aa11.44□□□□□ -0.58
USP11-208ENST00000480104 MLYCDO95822 493 aa11.44□□□□□ -0.58
USP11-208ENST00000480104 HPP00738 406 aa11.44□□□□□ -0.58
USP11-208ENST00000480104 PDHA1P08559 390 aa11.44□□□□□ -0.58
USP11-208ENST00000480104 GPR89BP0CG08 455 aa11.44□□□□□ -0.58
USP11-208ENST00000480104 ALDH6A1Q02252 535 aaKnown RBP11.44□□□□□ -0.58
USP11-208ENST00000480104 SLC10A7Q0GE19 358 aa11.44□□□□□ -0.58
USP11-208ENST00000480104 LBRQ14739 615 aaKnown RBP11.44□□□□□ -0.58
USP11-208ENST00000480104 HIBCHQ6NVY1 386 aaPredicted RBP11.44□□□□□ -0.58
USP11-208ENST00000480104 SHISA6Q6ZSJ9 500 aa11.44□□□□□ -0.58
USP11-208ENST00000480104 FGD2Q7Z6J4 655 aa11.44□□□□□ -0.58
USP11-208ENST00000480104 KBTBD2Q8IY47 623 aa11.44□□□□□ -0.58
USP11-208ENST00000480104 PGBD5Q8N414 524 aa11.44□□□□□ -0.58
USP11-208ENST00000480104 RXFP2Q8WXD0 754 aa11.44□□□□□ -0.58
USP11-208ENST00000480104 NTAN1Q96AB6 310 aa11.44□□□□□ -0.58
USP11-208ENST00000480104 SPSB2Q99619 263 aa11.44□□□□□ -0.58
USP11-208ENST00000480104 TSG101Q99816 390 aa11.44□□□□□ -0.58
USP11-208ENST00000480104 FAM83DQ9H4H8 585 aa11.44□□□□□ -0.58
USP11-208ENST00000480104 MRM3Q9HC36 420 aaKnown RBP11.44□□□□□ -0.58
USP11-208ENST00000480104 TRIM39Q9HCM9 518 aa11.44□□□□□ -0.58
USP11-208ENST00000480104 PSMD13Q9UNM6 376 aa11.44□□□□□ -0.58
USP11-208ENST00000480104 MTMR6Q9Y217 621 aa11.44□□□□□ -0.58
USP11-208ENST00000480104 CFAP20Q9Y6A4 193 aaKnown RBP11.44□□□□□ -0.58
USP11-208ENST00000480104 AP1M2Q9Y6Q5 423 aa11.44□□□□□ -0.58
USP11-208ENST00000480104 ARID1AO14497 2285 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 A0A0J9YYE9 177 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 GSAPA4D1B5 854 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 OR5H15A6NDH6 313 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 IDSB3KWA1 339 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 PHF1O43189 567 aaPredicted RBP11.43□□□□□ -0.58
USP11-208ENST00000480104 MTX2O75431 263 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 SLC25A14O95258 325 aaPredicted RBP11.43□□□□□ -0.58
USP11-208ENST00000480104 CLDN7O95471 211 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 TRBC1P01850 177 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 UQCRHP07919 91 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 PRR35P0CG20 571 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 PVRP15151 417 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 SDC4P31431 198 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 ME1P48163 572 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 DCAF7P61962 342 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 TMPRSS15P98073 1019 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 SNTB1Q13884 538 aaKnown RBP11.43□□□□□ -0.58
USP11-208ENST00000480104 RABEP1Q15276 862 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 DEFB110Q30KQ9 67 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 ZNF569Q5MCW4 686 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 ENOSF1Q7L5Y1 443 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 ARCQ7LC44 396 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 STRADAQ7RTN6 431 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 SLFN11Q7Z7L1 901 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 SIAH3Q8IW03 269 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 ARHGAP12Q8IWW6 846 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 GHDCQ8N2G8 530 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 VWA5B2Q8N398 1253 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 FAM172AQ8WUF8 416 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 Q96MF0 132 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 MENTQ9BUN1 341 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 SPRTNQ9H040 489 aaPredicted RBP11.43□□□□□ -0.58
USP11-208ENST00000480104 DMRT3Q9NQL9 472 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 TXLNGQ9NUQ3 528 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 IMP3Q9NV31 184 aaKnown RBP11.43□□□□□ -0.58
USP11-208ENST00000480104 PCDHA7Q9UN72 937 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 ASB1Q9Y576 335 aa11.43□□□□□ -0.58
USP11-208ENST00000480104 A6NNC1 897 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 DFFAO00273 331 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 ZSCAN9O15535 394 aaPredicted RBP11.42□□□□□ -0.58
USP11-208ENST00000480104 MAP3K7O43318 606 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 HCRTR1O43613 425 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 ASNA1O43681 348 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 IFNA2P01563 188 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 CTSBP07858 339 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 MTHFD1P11586 935 aaKnown RBP11.42□□□□□ -0.58
USP11-208ENST00000480104 HLA-DPA1P20036 260 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 ITGAXP20702 1163 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 SPINT3P49223 89 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms