RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 A0A0G2JNG1 304 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 WIPF3A6NGB9 483 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 PDZK1P1A8MUH7 402 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 HACD1B0YJ81 288 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 GPR89AB7ZAQ6 455 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 MKRN2OSH3BPM6 223 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 H7C0C1 242 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 KIR2DS3K7RE56 304 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 GRID2O43424 1007 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 KRT86O43790 486 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 VEGFDO43915 354 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 CST8O60676 142 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 PMPCBO75439 489 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 RFPL1O75677 317 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 ZNF189O75820 626 aaPredicted RBP6.53□□□□□ -1.36
VCP-205ENST00000479300 KRT38O76015 456 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 NDST3O95803 873 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 VIPP01282 170 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 ATP1A1P05023 1023 aaKnown RBP6.53□□□□□ -1.36
VCP-205ENST00000479300 GPR89BP0CG08 455 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 IMPDH2P12268 514 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 ACP5P13686 325 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 DLSTP36957 453 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 SCTRP47872 440 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 ATP5OP48047 213 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 VAV2P52735 878 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 GFERP55789 205 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 SH3BP2P78314 561 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 ELF3P78545 371 aaPredicted RBP6.53□□□□□ -1.36
VCP-205ENST00000479300 HHEXQ03014 270 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 SLC10A2Q12908 348 aaPredicted RBP6.53□□□□□ -1.36
VCP-205ENST00000479300 ZBTB17Q13105 803 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 MRPL49Q13405 166 aaKnown RBP6.53□□□□□ -1.36
VCP-205ENST00000479300 NFATC2Q13469 925 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 LAMB3Q13751 1172 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 BLMHQ13867 455 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 MAP7Q14244 749 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 PRPSAP1Q14558 356 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 IHHQ14623 411 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 KIR2DS5Q14953 304 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 SLC14A2Q15849 920 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 INSCQ1MX18 579 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 TEX44Q53QW1 395 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 CMPK2Q5EBM0 449 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 TFDP3Q5H9I0 405 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 ZDHHC20Q5W0Z9 365 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 CPZQ66K79 652 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 ITPRIPL1Q6GPH6 555 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 NPNTQ6UXI9 565 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 CEACAM20Q6UY09 585 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 SPOCD1Q6ZMY3 1216 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 PID1Q7Z2X4 250 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 DAAM2Q86T65 1068 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 LRRTM4Q86VH4 590 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 TICAM1Q8IUC6 712 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 TRAM1L1Q8N609 369 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 EIF1ADQ8N9N8 165 aaKnown RBP6.53□□□□□ -1.36
VCP-205ENST00000479300 Q8NA96 180 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 GALNT6Q8NCL4 622 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 CPT1CQ8TCG5 803 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 NCSTNQ92542 709 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 ARL8AQ96BM9 186 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 HAUS1Q96CS2 278 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 IMP4Q96G21 291 aaKnown RBP6.53□□□□□ -1.36
VCP-205ENST00000479300 COX14Q96I36 57 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 ATP6V1G3Q96LB4 118 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 PPP1R2P1Q96PQ5 205 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 AGAP2Q99490 1192 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 VAT1Q99536 393 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 TBC1D10AQ9BXI6 508 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 FSD1LQ9BXM9 530 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 CEP41Q9BYV8 373 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 TSGA10Q9BZW7 698 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 ZCCHC2Q9C0B9 1178 aaKnown RBP6.53□□□□□ -1.36
VCP-205ENST00000479300 OR2AG1Q9H205 316 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 EPB41L1Q9H4G0 881 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 TRABDQ9H4I3 376 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 AKIRIN1Q9H9L7 192 aaPredicted RBP6.53□□□□□ -1.36
VCP-205ENST00000479300 TRIM39Q9HCM9 518 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 HACD3Q9P035 362 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 TBC1D29Q9UFV1 150 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 KLHL3Q9UH77 587 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 FAM153AQ9UHL3 310 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 TRHDEQ9UKU6 1024 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 SHOC2Q9UQ13 582 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 KCNK6Q9Y257 313 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 ZNF711Q9Y462 761 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 PRKAB1Q9Y478 270 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 OAS3Q9Y6K5 1087 aaKnown RBP6.53□□□□□ -1.36
VCP-205ENST00000479300 ADGRG4Q8IZF6 3080 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 MN1Q10571 1320 aaPredicted RBP6.52□□□□□ -1.37
VCP-205ENST00000479300 GOLGA6L10A0A0M3HER8 536 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 MACROD2A1Z1Q3 448 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 CDC14CA4D256 554 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 GMNCA6NCL1 334 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 A6NHS1 94 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 TTLL8A6PVC2 850 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 TCP11X1B4DZS4 312 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 POLR1CO15160 346 aaPredicted RBP6.52□□□□□ -1.37
VCP-205ENST00000479300 KMOO15229 486 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms