RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 CCSER1Q9C0I3 900 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 POLMQ9NP87 494 aaPredicted RBP5.37□□□□□ -1.55
USF3-202ENST00000478658 POMPQ9Y244 141 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 NEU2Q9Y3R4 380 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 ASB3Q9Y575 518 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 REREQ9P2R6 1566 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 LOXHD1Q8IVV2 1947 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 FRMPD2Q68DX3 1309 aaPredicted RBP5.37□□□□□ -1.55
USF3-202ENST00000478658 TVP23AA6NH52 213 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 MAGEB17A8MXT2 336 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 SPP1P10451 314 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 PFKFB1P16118 471 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 SLC6A4P31645 630 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 HMGN3Q15651 99 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 ARMC12Q5T9G4 340 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 KCNT2Q6UVM3 1135 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 GTF2H5Q6ZYL4 71 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 LARP4Q71RC2 724 aaKnown RBP eCLIP5.37□□□□□ -1.55
USF3-202ENST00000478658 TPRA1Q86W33 373 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 FNDC5Q8NAU1 212 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 LENG1Q96BZ8 264 aaPredicted RBP5.37□□□□□ -1.55
USF3-202ENST00000478658 SGF29Q96ES7 293 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 MAELQ96JY0 434 aaKnown RBP5.37□□□□□ -1.55
USF3-202ENST00000478658 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.37□□□□□ -1.55
USF3-202ENST00000478658 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.37□□□□□ -1.55
USF3-202ENST00000478658 FAM105AQ9NUU6 356 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 SLC2A8Q9NY64 477 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 GMEB2Q9UKD1 530 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 RIMKLBQ9ULI2 386 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 DNMBPQ6XZF7 1577 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 FAM86B1E9PN63 330 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 SNNO75324 88 aaPredicted RBP5.36□□□□□ -1.55
USF3-202ENST00000478658 MATN4O95460 622 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 POP4O95707 220 aaKnown RBP5.36□□□□□ -1.55
USF3-202ENST00000478658 SERPINA7P05543 415 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 FAM86B2P0C5J1 330 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 IDO1P14902 403 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 PRKACGP22612 351 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 HTR7P34969 479 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 CDK9P50750 372 aaKnown RBP5.36□□□□□ -1.55
USF3-202ENST00000478658 SNTB1Q13884 538 aaKnown RBP5.36□□□□□ -1.55
USF3-202ENST00000478658 CAPSQ13938 189 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 PAN2Q504Q3 1202 aaKnown RBP5.36□□□□□ -1.55
USF3-202ENST00000478658 MILR1Q7Z6M3 343 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 RASAL3Q86YV0 1011 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 DCUN1D3Q8IWE4 304 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 FAM86B1Q8N7N1 296 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 RELL2Q8NC24 303 aaPredicted RBP5.36□□□□□ -1.55
USF3-202ENST00000478658 RHEBL1Q8TAI7 183 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 S100A16Q96FQ6 103 aaKnown RBP5.36□□□□□ -1.55
USF3-202ENST00000478658 TGM7Q96PF1 710 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 PHPT1Q9NRX4 125 aaPredicted RBP5.36□□□□□ -1.55
USF3-202ENST00000478658 ABCC13Q9NSE7 274 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 NUDT15Q9NV35 164 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 ICKQ9UPZ9 632 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 ERVK-19Q9WJR5 959 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 LRP5LA4QPB2 252 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 PCP4L1A6NKN8 68 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 DUXAA6NLW8 204 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 A8MVJ9 347 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 RNASEK-C17orf49H0YIS7 233 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 CCNT2O60583 730 aaKnown RBP5.36□□□□□ -1.55
USF3-202ENST00000478658 RP2O75695 350 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 LCKP06239 509 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 IRF1P10914 325 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 ALAS2P22557 587 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 ITPKBP27987 946 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 OR1G1P47890 313 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 RPL14P50914 215 aaKnown RBP5.36□□□□□ -1.55
USF3-202ENST00000478658 DSTNP60981 165 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 GSTM4Q03013 218 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 TFDP3Q5H9I0 405 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 TIPARPQ7Z3E1 657 aaKnown RBP5.36□□□□□ -1.55
USF3-202ENST00000478658 IQCHQ86VS3 1027 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 GPSM1Q86YR5 675 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 DENND1CQ8IV53 801 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 ZNF610Q8N9Z0 462 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 OR9K2Q8NGE7 335 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 SUN5Q8TC36 379 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 C17orf50Q8WW18 174 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 HTRA1Q92743 480 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 ELOVL4Q9GZR5 314 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 MALT1Q9UDY8 824 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 HACL1Q9UJ83 578 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 POFUT2Q9Y2G5 429 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 ACOT9Q9Y305 439 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 MRPS16Q9Y3D3 137 aaKnown RBP5.36□□□□□ -1.55
USF3-202ENST00000478658 N6AMT1Q9Y5N5 214 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 KCNE2Q9Y6J6 123 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 PNPLA6Q8IY17 1366 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 MYO9BQ13459 2157 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 hCG_2014768A0A024R1R8 64 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 OTOL1A6NHN0 477 aaPredicted RBP5.36□□□□□ -1.55
USF3-202ENST00000478658 TULP3O75386 442 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 CD3GP09693 182 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 CT45A6P0DMU7 189 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 CT45A5P0DMU8 189 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 CT45A7P0DMV0 189 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 CT45A8P0DMV1 189 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 CT45A9P0DMV2 189 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms