RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 ZNF71Q9NQZ8 489 aaPredicted RBP14.09□□□□□ -0.15
SMARCE1-209ENST00000478349 KCND1Q9NSA2 647 aa14.09□□□□□ -0.15
SMARCE1-209ENST00000478349 FAM8A1Q9UBU6 413 aa14.09□□□□□ -0.15
SMARCE1-209ENST00000478349 MRPS18BQ9Y676 258 aaKnown RBP14.09□□□□□ -0.15
SMARCE1-209ENST00000478349 CFAP20Q9Y6A4 193 aaKnown RBP14.09□□□□□ -0.15
SMARCE1-209ENST00000478349 AGAP14A8MT82 685 aa14.08□□□□□ -0.16
SMARCE1-209ENST00000478349 PSMD3O43242 534 aa14.08□□□□□ -0.16
SMARCE1-209ENST00000478349 EBLN1P0CF75 366 aa14.08□□□□□ -0.16
SMARCE1-209ENST00000478349 FOLR1P15328 257 aa14.08□□□□□ -0.16
SMARCE1-209ENST00000478349 CDH3P22223 829 aa14.08□□□□□ -0.16
SMARCE1-209ENST00000478349 ZNF140P52738 457 aaPredicted RBP14.08□□□□□ -0.16
SMARCE1-209ENST00000478349 RPA4Q13156 261 aa14.08□□□□□ -0.16
SMARCE1-209ENST00000478349 LAMB3Q13751 1172 aa14.08□□□□□ -0.16
SMARCE1-209ENST00000478349 SKIDA1Q1XH10 827 aa14.08□□□□□ -0.16
SMARCE1-209ENST00000478349 ATP1A1-AS1Q5TC04 95 aa14.08□□□□□ -0.16
SMARCE1-209ENST00000478349 PWWP2BQ6NUJ5 590 aa14.08□□□□□ -0.16
SMARCE1-209ENST00000478349 KIAA1328Q86T90 577 aa14.08□□□□□ -0.16
SMARCE1-209ENST00000478349 HOOK3Q86VS8 718 aa14.08□□□□□ -0.16
SMARCE1-209ENST00000478349 ATCAYQ86WG3 371 aa14.08□□□□□ -0.16
SMARCE1-209ENST00000478349 CFAP206Q8IYR0 622 aa14.08□□□□□ -0.16
SMARCE1-209ENST00000478349 CT55Q8WUE5 264 aa14.08□□□□□ -0.16
SMARCE1-209ENST00000478349 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.08□□□□□ -0.16
SMARCE1-209ENST00000478349 C1GALT1Q9NS00 363 aa14.08□□□□□ -0.16
SMARCE1-209ENST00000478349 ZDHHC3Q9NYG2 299 aa14.08□□□□□ -0.16
SMARCE1-209ENST00000478349 BTRCQ9Y297 605 aa14.08□□□□□ -0.16
SMARCE1-209ENST00000478349 GSAPA4D1B5 854 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 AP2A2O94973 939 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 POLBP06746 335 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 F8A1P23610 371 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 PTPN4P29074 926 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 MC4RP32245 332 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 CD151P48509 253 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 VAV2P52735 878 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 PPP1CAP62136 330 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 KCNAB1Q14722 419 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 PARP6Q2NL67 630 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 ZRANB3Q5FWF4 1079 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 PEX26Q7Z412 305 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 LINC00523Q86TU6 105 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 APLFQ8IW19 511 aaPredicted RBP14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 OR13C4Q8NGS5 318 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 CCDC110Q8TBZ0 833 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 MR1Q95460 341 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 RMDN2Q96LZ7 410 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 LRFN5Q96NI6 719 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 TTC1Q99614 292 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 SLC7A5P2Q9GIP4 190 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 MVB12BQ9H7P6 319 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 AMFRQ9UKV5 643 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 POMT2Q9UKY4 750 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 TP53TG5Q9Y2B4 290 aa14.07□□□□□ -0.16
SMARCE1-209ENST00000478349 SOWAHDA6NJG2 315 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 H7C0S8 307 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 FTH1P02794 183 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 HBQ1P09105 142 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 MSL3P1P0C860 447 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 CYP2A7P20853 494 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 ACRV1P26436 265 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 FOXK1P85037 733 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 TMPRSS15P98073 1019 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 XIAPP98170 497 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 PLOD1Q02809 727 aaPredicted RBP14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 CACNG1Q06432 222 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 KIF5AQ12840 1032 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 PTPRCAPQ14761 206 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 UGT8Q16880 541 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 CAPRIN2Q6IMN6 1127 aaKnown RBP14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 DUS1LQ6P1R4 473 aaKnown RBP14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 ASB18Q6ZVZ8 466 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 TAS2R42Q7RTR8 314 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 OR4E2Q8NGC2 313 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 N4BP2L2Q92802 583 aaPredicted RBP14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 FERD3LQ96RJ6 166 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 C17orf62Q9BQA9 187 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 GORASP1Q9BQQ3 440 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 C10orf88Q9H8K7 445 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 COG4Q9H9E3 785 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 SERTAD3Q9UJW9 196 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 TFR2Q9UP52 801 aa14.06□□□□□ -0.16
SMARCE1-209ENST00000478349 IGLV3-16A0A075B6K0 115 aa14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 ERI2A8K979 691 aaKnown RBP14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 C2orf74A8MZ97 194 aa14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 LIN7AO14910 233 aaPredicted RBP14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 TIAF1O95411 115 aa14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 NTRK1P04629 796 aa14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 POLR2CP19387 275 aaPredicted RBP14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 PREPP48147 710 aa14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 ZNF75DP51815 510 aa14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 KPNA2P52292 529 aaKnown RBP14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 GPR19Q15760 415 aa14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 SYTL3Q4VX76 610 aa14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 IZUMO3Q5VZ72 239 aa14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 STYXQ8WUJ0 223 aa14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 UBE2Q2Q8WVN8 375 aa14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 ZNF501Q96CX3 271 aaPredicted RBP14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 CLIP3Q96DZ5 547 aa14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 DNAJC1Q96KC8 554 aaKnown RBP14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 DPH2Q9BQC3 489 aaPredicted RBP14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 TFB2MQ9H5Q4 396 aaKnown RBP14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 ACSS2Q9NR19 701 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms