RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 UBP1Q9NZI7 540 aa9.39□□□□□ -0.91
CCM2-210ENST00000478169 SERTAD3Q9UJW9 196 aa9.39□□□□□ -0.91
CCM2-210ENST00000478169 POMT2Q9UKY4 750 aa9.39□□□□□ -0.91
CCM2-210ENST00000478169 SLC5A6Q9Y289 635 aa9.39□□□□□ -0.91
CCM2-210ENST00000478169 PADI2Q9Y2J8 665 aa9.39□□□□□ -0.91
CCM2-210ENST00000478169 LUC7L2Q9Y383 392 aaKnown RBP9.39□□□□□ -0.91
CCM2-210ENST00000478169 PKP3Q9Y446 797 aa9.39□□□□□ -0.91
CCM2-210ENST00000478169 HEBP2Q9Y5Z4 205 aa9.39□□□□□ -0.91
CCM2-210ENST00000478169 ABCA12Q86UK0 2595 aa9.39□□□□□ -0.91
CCM2-210ENST00000478169 TMEM150CB9EJG8 249 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 C9J4A7 227 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 GAPDHSO14556 408 aaPredicted RBP9.38□□□□□ -0.91
CCM2-210ENST00000478169 GPR39O43194 453 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 LCA5LO95447 670 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 IGHEP01854 428 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 ALPPP05187 535 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 CD63P08962 238 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 SLC35G4P0C7Q5 338 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 POLR2CP19387 275 aaPredicted RBP9.38□□□□□ -0.91
CCM2-210ENST00000478169 HLA-DPA1P20036 260 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 CYP2A7P20853 494 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 AGXTP21549 392 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 COL8A1P27658 744 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 PBLDP30039 288 aaPredicted RBP9.38□□□□□ -0.91
CCM2-210ENST00000478169 AKT1P31749 480 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 CD68P34810 354 aaPredicted RBP9.38□□□□□ -0.91
CCM2-210ENST00000478169 CA5AP35218 305 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 ARHGAP25P42331 645 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 PREPP48147 710 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 ATP1A4Q13733 1029 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 GSE1Q14687 1217 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 MESDQ14696 234 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 SSPNQ14714 243 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 IQCB1Q15051 598 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 NCF4Q15080 339 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 PRKD1Q15139 912 aaPredicted RBP9.38□□□□□ -0.91
CCM2-210ENST00000478169 NR6A1Q15406 480 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 SLC1A5Q15758 541 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 ZNF789Q5FWF6 425 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 SIRPB2Q5JXA9 342 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 LRRC38Q5VT99 294 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 DUS1LQ6P1R4 473 aaKnown RBP9.38□□□□□ -0.91
CCM2-210ENST00000478169 RFX6Q8HWS3 928 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 ACVR1CQ8NER5 493 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 OR4E2Q8NGC2 313 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 OR1L3Q8NH93 324 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 ZNF398Q8TD17 642 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 BLOC1S5Q8TDH9 187 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 CPLX3Q8WVH0 158 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 MRGPRX2Q96LB1 330 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 FER1L6-AS2Q96M78 137 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 PPM1MQ96MI6 270 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 VAT1Q99536 393 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 C17orf62Q9BQA9 187 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 PITPNM3Q9BZ71 974 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 SLC7A5P2Q9GIP4 190 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 ASF1BQ9NVP2 202 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 B3GNT3Q9Y2A9 372 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 PCSK5Q92824 1860 aa9.38□□□□□ -0.91
CCM2-210ENST00000478169 ANKUB1A6NFN9 424 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 E7EQ34 232 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 STX7O15400 261 aaKnown RBP9.37□□□□□ -0.91
CCM2-210ENST00000478169 KRT86O43790 486 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 IPO13O94829 963 aaKnown RBP9.37□□□□□ -0.91
CCM2-210ENST00000478169 TMEM253P0C7T8 217 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 NFKB1P19838 968 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 PRDX3P30048 256 aaKnown RBP9.37□□□□□ -0.91
CCM2-210ENST00000478169 HNRNPH3P31942 346 aaKnown RBP9.37□□□□□ -0.91
CCM2-210ENST00000478169 ARCN1P48444 511 aaKnown RBP9.37□□□□□ -0.91
CCM2-210ENST00000478169 FANCCQ00597 558 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 WASHC5Q12768 1159 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 MPP3Q13368 585 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 ELOAQ14241 798 aaKnown RBP9.37□□□□□ -0.91
CCM2-210ENST00000478169 KRT33BQ14525 404 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 NOMO1Q15155 1222 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 SLC18A3Q16572 532 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 PTCHD3Q3KNS1 767 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 BCL7AQ4VC05 210 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 ODF2Q5BJF6 829 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 FAM69BQ5VUD6 431 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 LYPLAL1Q5VWZ2 237 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 ZNF385CQ66K41 422 aaPredicted RBP9.37□□□□□ -0.91
CCM2-210ENST00000478169 FBXO38Q6PIJ6 1188 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 B4GALNT4Q76KP1 1039 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 CISD2Q8N5K1 135 aaKnown RBP9.37□□□□□ -0.91
CCM2-210ENST00000478169 SLC25A41Q8N5S1 370 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 TTC13Q8NBP0 860 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 SLC35G2Q8TBE7 412 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 TFB1MQ8WVM0 346 aaKnown RBP9.37□□□□□ -0.91
CCM2-210ENST00000478169 LCN9Q8WX39 176 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 TM9SF4Q92544 642 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 RMDN2Q96LZ7 410 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 FCRL5Q96RD9 977 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 BARD1Q99728 777 aaKnown RBP9.37□□□□□ -0.91
CCM2-210ENST00000478169 PACSIN1Q9BY11 444 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 SRMSQ9H3Y6 488 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 DDX56Q9NY93 547 aaKnown RBP9.37□□□□□ -0.91
CCM2-210ENST00000478169 MYO7BQ6PIF6 2116 aa9.37□□□□□ -0.91
CCM2-210ENST00000478169 C17orf113A0A1B0GUU1 675 aa9.36□□□□□ -0.91
CCM2-210ENST00000478169 GSAPA4D1B5 854 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms