RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 CDY1Q9Y6F8 540 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 TRIP11Q15643 1979 aa12.48□□□□□ -0.41
RTFDC1-207ENST00000477573 OR6C70A6NIJ9 312 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 DBX1A6NMT0 343 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 ZNF99A8MXY4 864 aaPredicted RBP12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 CYB561D2O14569 222 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 SEPT4O43236 478 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 TGM6O95932 706 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 FTH1P02794 183 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 MSH3P20585 1137 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 CTGFP29279 349 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 PNPLA4P41247 253 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 GABRB2P47870 512 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 FLT3LGP49771 235 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 DCDC1P59894 354 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 ABRQ12979 859 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 BTBD16Q32M84 506 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 TMEM236Q5W0B7 351 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 TIGD7Q6NT04 549 aaPredicted RBP12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 LIPIQ6XZB0 460 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 PPIL6Q8IXY8 311 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 CCDC116Q8IYX3 515 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 PPM1NQ8N819 430 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 ZNF781Q8N8C0 355 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 C3orf58Q8NDZ4 430 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 TRPV1Q8NER1 839 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 SETD7Q8WTS6 366 aaKnown RBP12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 CENPNQ96H22 339 aaPredicted RBP12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 UBXN10Q96LJ8 280 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 FYTTD1Q96QD9 318 aaKnown RBP12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 HERPUD2Q9BSE4 406 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 SHARPINQ9H0F6 387 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 NXF3Q9H4D5 531 aaKnown RBP12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 AGPAT4Q9NRZ5 378 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 CCM2LQ9NUG4 571 aaPredicted RBP12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 TRHDEQ9UKU6 1024 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 ZFR2Q9UPR6 939 aaKnown RBP12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 KLHL20Q9Y2M5 609 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 TCRBV5S1A1TA0A578 114 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 HEATR9A2RTY3 570 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 LOC110117498-PIK3R3F6TDL0 507 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 GOLGA8SH3BPF8 625 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 M0QYV0 167 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 KCNN4O15554 427 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 LIASO43766 372 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 HS6ST1O60243 411 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 TIPRLO75663 272 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 FABP1P07148 127 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 RALAP11233 206 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 ALOX12P18054 663 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 GGT5P36269 586 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 ETV6P41212 452 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 RAB13P51153 203 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 ERVFC1P60507 584 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 RPL7AP62424 266 aaKnown RBP12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 RPL10AP62906 217 aaKnown RBP12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 MRPS6P82932 125 aaKnown RBP12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 NOGQ13253 232 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 FASTKD1Q53R41 847 aaKnown RBP12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 ALG1LQ6GMV1 187 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 SHQ1Q6PI26 577 aaKnown RBP12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 EFL1Q7Z2Z2 1120 aaKnown RBP12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 POLNQ7Z5Q5 900 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 COMMD7Q86VX2 200 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 RBFAQ8N0V3 343 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 RNF148Q8N7C7 305 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 NIPA2Q8N8Q9 360 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 TMEM40Q8WWA1 233 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 TRIM8Q9BZR9 551 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 NUAK2Q9H093 628 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 RACGAP1Q9H0H5 632 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 HES2Q9Y543 173 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 PCDHB12Q9Y5F1 795 aa12.47□□□□□ -0.41
RTFDC1-207ENST00000477573 RFPL1O75677 317 aa12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 ADORA3P0DMS8 318 aa12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 FGF3P11487 239 aaPredicted RBP12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 KCNE1P15382 129 aa12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 GP2P55259 537 aaKnown RBP12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 ERVK-8P63133 956 aa12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 ZNF91Q05481 1191 aa12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 FAM214AQ32MH5 1076 aa12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 PTPN20Q4JDL3 420 aa12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 COLEC12Q5KU26 742 aa12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 C9orf57Q5W0N0 161 aa12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 PRMT9Q6P2P2 845 aa12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 LCLAT1Q6UWP7 414 aa12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 ZCCHC23Q6ZST2 131 aa12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 P2RY8Q86VZ1 359 aa12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 UNC93AQ86WB7 457 aa12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 NLGN4XQ8N0W4 816 aa12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 ART5Q96L15 291 aa12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 SIGLEC10Q96LC7 697 aa12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 HDHD5Q9BXW7 423 aa12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 TINAGL1Q9GZM7 467 aaPredicted RBP12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 ING2Q9H160 280 aa12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 UNC93B1Q9H1C4 597 aa12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 RANBP3Q9H6Z4 567 aaPredicted RBP12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 PCDHGB6Q9Y5F9 930 aa12.46□□□□□ -0.41
RTFDC1-207ENST00000477573 FKBP7Q9Y680 259 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms