RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 SDF4Q9BRK5 362 aa5.84□□□□□ -1.47
SMC5-203ENST00000475540 PELI2Q9HAT8 420 aa5.84□□□□□ -1.47
SMC5-203ENST00000475540 KCNJ14Q9UNX9 436 aa5.84□□□□□ -1.47
SMC5-203ENST00000475540 KCNK7Q9Y2U2 307 aa5.84□□□□□ -1.47
SMC5-203ENST00000475540 SPIN1Q9Y657 262 aaPredicted RBP5.84□□□□□ -1.47
SMC5-203ENST00000475540 ASTN2O75129 1339 aaPredicted RBP5.83□□□□□ -1.48
SMC5-203ENST00000475540 TO15178 435 aa5.83□□□□□ -1.48
SMC5-203ENST00000475540 SSX4O60224 188 aa5.83□□□□□ -1.48
SMC5-203ENST00000475540 CDH11P55287 796 aa5.83□□□□□ -1.48
SMC5-203ENST00000475540 C17orf53Q8N3J3 647 aaPredicted RBP5.83□□□□□ -1.48
SMC5-203ENST00000475540 TMEM143Q96AN5 459 aa5.83□□□□□ -1.48
SMC5-203ENST00000475540 GHITMQ9H3K2 345 aa5.83□□□□□ -1.48
SMC5-203ENST00000475540 OSGEPL1Q9H4B0 414 aa5.83□□□□□ -1.48
SMC5-203ENST00000475540 TBC1D22BQ9NU19 505 aa5.83□□□□□ -1.48
SMC5-203ENST00000475540 LARSQ9P2J5 1176 aaKnown RBP5.83□□□□□ -1.48
SMC5-203ENST00000475540 HACL1Q9UJ83 578 aa5.83□□□□□ -1.48
SMC5-203ENST00000475540 PLAGL1Q9UM63 463 aa5.83□□□□□ -1.48
SMC5-203ENST00000475540 RABGAP1Q9Y3P9 1069 aa5.83□□□□□ -1.48
SMC5-203ENST00000475540 RSF1Q96T23 1441 aaPredicted RBP5.82□□□□□ -1.48
SMC5-203ENST00000475540 PRSS51A0A1B0GVH4 220 aa5.82□□□□□ -1.48
SMC5-203ENST00000475540 A0A1W2PQ09 198 aa5.82□□□□□ -1.48
SMC5-203ENST00000475540 LNP1A1A4G5 178 aa5.82□□□□□ -1.48
SMC5-203ENST00000475540 MAGEB17A8MXT2 336 aa5.82□□□□□ -1.48
SMC5-203ENST00000475540 PSMD14O00487 310 aa5.82□□□□□ -1.48
SMC5-203ENST00000475540 CTDSP2O14595 271 aa5.82□□□□□ -1.48
SMC5-203ENST00000475540 TSPAN9O75954 239 aa5.82□□□□□ -1.48
SMC5-203ENST00000475540 GNB3P16520 340 aa5.82□□□□□ -1.48
SMC5-203ENST00000475540 GCH1P30793 250 aa5.82□□□□□ -1.48
SMC5-203ENST00000475540 VEGFCP49767 419 aa5.82□□□□□ -1.48
SMC5-203ENST00000475540 ARSEP51690 589 aa5.82□□□□□ -1.48
SMC5-203ENST00000475540 ITPRIPL1Q6GPH6 555 aa5.82□□□□□ -1.48
SMC5-203ENST00000475540 SH2D5Q6ZV89 423 aa5.82□□□□□ -1.48
SMC5-203ENST00000475540 ADAD2Q8NCV1 583 aaKnown RBP5.82□□□□□ -1.48
SMC5-203ENST00000475540 PPFIBP2Q8ND30 876 aa5.82□□□□□ -1.48
SMC5-203ENST00000475540 CTCFLQ8NI51 663 aaPredicted RBP5.82□□□□□ -1.48
SMC5-203ENST00000475540 WDR20Q8TBZ3 569 aa5.82□□□□□ -1.48
SMC5-203ENST00000475540 HCAR2Q8TDS4 363 aa5.82□□□□□ -1.48
SMC5-203ENST00000475540 SLC47A1Q96FL8 570 aa5.82□□□□□ -1.48
SMC5-203ENST00000475540 SGK494Q96LW2 274 aa5.82□□□□□ -1.48
SMC5-203ENST00000475540 PPIL3Q9H2H8 161 aaKnown RBP5.82□□□□□ -1.48
SMC5-203ENST00000475540 KCNK15Q9H427 330 aa5.82□□□□□ -1.48
SMC5-203ENST00000475540 RPS6KL1Q9Y6S9 549 aa5.82□□□□□ -1.48
SMC5-203ENST00000475540 OR2A25A4D2G3 310 aa5.81□□□□□ -1.48
SMC5-203ENST00000475540 AGAP14A8MT82 685 aa5.81□□□□□ -1.48
SMC5-203ENST00000475540 SLC22A2O15244 555 aa5.81□□□□□ -1.48
SMC5-203ENST00000475540 ACP2P11117 423 aa5.81□□□□□ -1.48
SMC5-203ENST00000475540 ITGA3P26006 1051 aa5.81□□□□□ -1.48
SMC5-203ENST00000475540 HOXD13P35453 343 aa5.81□□□□□ -1.48
SMC5-203ENST00000475540 MAP2K2P36507 400 aa5.81□□□□□ -1.48
SMC5-203ENST00000475540 PNLIPRP2P54317 469 aa5.81□□□□□ -1.48
SMC5-203ENST00000475540 CXCL9Q07325 125 aa5.81□□□□□ -1.48
SMC5-203ENST00000475540 FBXL22Q6P050 247 aa5.81□□□□□ -1.48
SMC5-203ENST00000475540 SZRD1Q7Z422 152 aa5.81□□□□□ -1.48
SMC5-203ENST00000475540 ZNF554Q86TJ5 538 aa5.81□□□□□ -1.48
SMC5-203ENST00000475540 LDB1Q86U70 411 aaPredicted RBP5.81□□□□□ -1.48
SMC5-203ENST00000475540 AACSQ86V21 672 aa5.81□□□□□ -1.48
SMC5-203ENST00000475540 DNAJC22Q8N4W6 341 aa5.81□□□□□ -1.48
SMC5-203ENST00000475540 POC5Q8NA72 575 aa5.81□□□□□ -1.48
SMC5-203ENST00000475540 OR6C1Q96RD1 312 aa5.81□□□□□ -1.48
SMC5-203ENST00000475540 TRAF4Q9BUZ4 470 aaPredicted RBP5.81□□□□□ -1.48
SMC5-203ENST00000475540 ABHD6Q9BV23 337 aa5.81□□□□□ -1.48
SMC5-203ENST00000475540 SPATC1LQ9H0A9 340 aa5.81□□□□□ -1.48
SMC5-203ENST00000475540 SIX2Q9NPC8 291 aa5.81□□□□□ -1.48
SMC5-203ENST00000475540 PSD3Q9NYI0 1048 aa5.81□□□□□ -1.48
SMC5-203ENST00000475540 VPS28Q9UK41 221 aa5.81□□□□□ -1.48
SMC5-203ENST00000475540 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.81□□□□□ -1.48
SMC5-203ENST00000475540 ANKRD18BA2A2Z9 1011 aa5.8□□□□□ -1.48
SMC5-203ENST00000475540 PRR32B1ATL7 298 aa5.8□□□□□ -1.48
SMC5-203ENST00000475540 PAPSS1O43252 624 aaPredicted RBP5.8□□□□□ -1.48
SMC5-203ENST00000475540 IGLV1-44P01699 117 aa5.8□□□□□ -1.48
SMC5-203ENST00000475540 VPREB1P12018 145 aa5.8□□□□□ -1.48
SMC5-203ENST00000475540 ALOX12P18054 663 aa5.8□□□□□ -1.48
SMC5-203ENST00000475540 CHAF1BQ13112 559 aa5.8□□□□□ -1.48
SMC5-203ENST00000475540 SIM2Q14190 667 aaPredicted RBP5.8□□□□□ -1.48
SMC5-203ENST00000475540 FAM205BPQ63HN1 556 aa5.8□□□□□ -1.48
SMC5-203ENST00000475540 CORO6Q6QEF8 472 aa5.8□□□□□ -1.48
SMC5-203ENST00000475540 TMCO3Q6UWJ1 677 aa5.8□□□□□ -1.48
SMC5-203ENST00000475540 HAUS6Q7Z4H7 955 aa5.8□□□□□ -1.48
SMC5-203ENST00000475540 ISCA2Q86U28 154 aa5.8□□□□□ -1.48
SMC5-203ENST00000475540 MYADMQ96S97 322 aa5.8□□□□□ -1.48
SMC5-203ENST00000475540 RTP3Q9BQQ7 232 aa5.8□□□□□ -1.48
SMC5-203ENST00000475540 C2orf42Q9NWW7 574 aa5.8□□□□□ -1.48
SMC5-203ENST00000475540 ZNF148Q9UQR1 794 aa5.8□□□□□ -1.48
SMC5-203ENST00000475540 STK36Q9NRP7 1315 aa5.79□□□□□ -1.48
SMC5-203ENST00000475540 A0A1W2PRB8 838 aa5.79□□□□□ -1.48
SMC5-203ENST00000475540 AVILO75366 819 aa5.79□□□□□ -1.48
SMC5-203ENST00000475540 ZWINTO95229 277 aa5.79□□□□□ -1.48
SMC5-203ENST00000475540 EIF5P55010 431 aaKnown RBP5.79□□□□□ -1.48
SMC5-203ENST00000475540 SIRPAP78324 504 aa5.79□□□□□ -1.48
SMC5-203ENST00000475540 ITGA9Q13797 1035 aa5.79□□□□□ -1.48
SMC5-203ENST00000475540 C14orf177Q52M58 125 aa5.79□□□□□ -1.48
SMC5-203ENST00000475540 RILPL1Q5EBL4 403 aa5.79□□□□□ -1.48
SMC5-203ENST00000475540 ZNF790Q6PG37 636 aa5.79□□□□□ -1.48
SMC5-203ENST00000475540 TAGAPQ8N103 731 aa5.79□□□□□ -1.48
SMC5-203ENST00000475540 CPSF7Q8N684 471 aaKnown RBP5.79□□□□□ -1.48
SMC5-203ENST00000475540 NSL1Q96IY1 281 aa5.79□□□□□ -1.48
SMC5-203ENST00000475540 C16orf70Q9BSU1 422 aa5.79□□□□□ -1.48
SMC5-203ENST00000475540 KIFC3Q9BVG8 833 aa5.79□□□□□ -1.48
SMC5-203ENST00000475540 ACKR4Q9NPB9 350 aa5.79□□□□□ -1.48
SMC5-203ENST00000475540 NR5A2O00482 541 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms