RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ISCA2Q86U28 154 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 FAM83AQ86UY5 434 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 ENTHD1Q8IYW4 607 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 MARCH10Q8NA82 808 aaPredicted RBP4.04□□□□□ -1.76
USP16-205ENST00000474835 ZNF680Q8NEM1 530 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 KLHL6Q8WZ60 621 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 HSD17B8Q92506 261 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 FCGR1BQ92637 280 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 PBXIP1Q96AQ6 731 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 MOCOSQ96EN8 888 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 CSPG4P5Q96PW8 444 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 RBP7Q96R05 134 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 LPIN3Q9BQK8 851 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 CALN1Q9BXU9 219 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 EXOSC3Q9NQT5 275 aaKnown RBP4.04□□□□□ -1.76
USP16-205ENST00000474835 TMEM39AQ9NV64 488 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 GPRC5BQ9NZH0 403 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 PTTG3PQ9NZH4 202 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 ZIM2Q9NZV7 527 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 XPR1Q9UBH6 696 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 SLC23A1Q9UHI7 598 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 TMPRSS11EQ9UL52 423 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 CFAP20Q9Y6A4 193 aaKnown RBP4.04□□□□□ -1.76
USP16-205ENST00000474835 TMEM131Q92545 1883 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 A0A087X1B8 175 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 OGTO15294 1046 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 PROM1O43490 865 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 EIF4E2O60573 245 aaKnown RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 TBCAO75347 108 aaKnown RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 WDPCPO95876 746 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 ICAM1P05362 532 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 TFE3P19532 575 aaPredicted RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 BDNFP23560 247 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 EDNRBP24530 442 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 ERP29P30040 261 aaKnown RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 KRT20P35900 424 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 KIR2DL3P43628 341 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 YAP1P46937 504 aaKnown RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 PPP3CCP48454 512 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 NCS1P62166 190 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 YWHAEP62258 255 aaKnown RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 SH3BP2P78314 561 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 FOXK2Q01167 660 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 NRG1Q02297 640 aaPredicted RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 IRF5Q13568 498 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 KCTD2Q14681 263 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 SLC39A12Q504Y0 691 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 RAB41Q5JT25 222 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 TMEM236Q5W0B7 351 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 LRRC66Q68CR7 880 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 PM20D1Q6GTS8 502 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 TIGD7Q6NT04 549 aaPredicted RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 ISLR2Q6UXK2 745 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 HDDC2Q7Z4H3 204 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 CMC1Q7Z7K0 106 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 SLCO6A1Q86UG4 719 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 TSPYL5Q86VY4 417 aaPredicted RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 LRRC47Q8N1G4 583 aaKnown RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 FLCNQ8NFG4 579 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 OR5H6Q8NGV6 325 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 SUN5Q8TC36 379 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 IPCEF1Q8WWN9 437 aaPredicted RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 COPS5Q92905 334 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 USP13Q92995 863 aaPredicted RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 KIAA1191Q96A73 305 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 SLC47A1Q96FL8 570 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 SLC6A18Q96N87 628 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 AGAP2Q99490 1192 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 TIMP4Q99727 224 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 TM9SF2Q99805 663 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 C19orf43Q9BQ61 176 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 SOX17Q9H6I2 414 aaPredicted RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 RNF122Q9H9V4 155 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 WDR6Q9NNW5 1121 aaKnown RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 KCNH7Q9NS40 1196 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 HOMER2Q9NSB8 354 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 CISHQ9NSE2 258 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 ZNF226Q9NYT6 803 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 CD274Q9NZQ7 290 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 KIF25Q9UIL4 384 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 IKZF3Q9UKT9 509 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 VANGL2Q9ULK5 521 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 STUB1Q9UNE7 303 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 CDYLQ9Y232 598 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 POLHQ9Y253 713 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 PRELID1Q9Y255 219 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 PKP3Q9Y446 797 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 MFHAS1Q9Y4C4 1052 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 PCDHGA2Q9Y5H1 932 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 COL5A1P20908 1838 aaPredicted RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 LOC100130705A0A1B0GUX0 176 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 MEIOCA2RUB1 952 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 PMS2P1A4D2B8 440 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 FAM220BPB1ANY3 271 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 IFRD1O00458 451 aaPredicted RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 AOC2O75106 756 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 CDK1P06493 297 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 LDHCP07864 332 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 MMP2P08253 660 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 CSF3P09919 207 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms