RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 EXOC3L1Q86VI1 746 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 LCA5Q86VQ0 697 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 SPNS2Q8IVW8 549 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 SLC22A15Q8IZD6 547 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 CENPLQ8N0S6 344 aaPredicted RBP8.17□□□□□ -1.1
CNN3-205ENST00000474409 LILRA3Q8N6C8 439 aaPredicted RBP8.17□□□□□ -1.1
CNN3-205ENST00000474409 CCDC63Q8NA47 563 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 LMX1AQ8TE12 382 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 EEF1AKMT1Q8WVE0 214 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 ANKRD49Q8WVL7 239 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 EXT2Q93063 718 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 LOXL4Q96JB6 756 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 FOPNLQ96NB1 174 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 LRRC61Q9BV99 259 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 DERL2Q9GZP9 239 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 WWP1Q9H0M0 922 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 TCEAL2Q9H3H9 227 aaPredicted RBP8.17□□□□□ -1.1
CNN3-205ENST00000474409 DPEP2Q9H4A9 486 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 NMRAL1Q9HBL8 299 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 SSU72Q9NP77 194 aaKnown RBP8.17□□□□□ -1.1
CNN3-205ENST00000474409 KCNK9Q9NPC2 374 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 MKS1Q9NXB0 559 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 SPASTQ9UBP0 616 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 SLC23A2Q9UGH3 650 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 DCDC2Q9UHG0 476 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 ACSL5Q9ULC5 683 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 PNMA8BQ9ULN7 279 aaPredicted RBP8.17□□□□□ -1.1
CNN3-205ENST00000474409 PSMD13Q9UNM6 376 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 RUVBL2Q9Y230 463 aaKnown RBP8.17□□□□□ -1.1
CNN3-205ENST00000474409 PLEKHM1Q9Y4G2 1056 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 SNX11Q9Y5W9 270 aa8.17□□□□□ -1.1
CNN3-205ENST00000474409 DNAH14Q0VDD8 3507 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 SLC5A10A0PJK1 596 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 TMEM120BA0PK00 339 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 PATE3B3GLJ2 98 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 SDC3O75056 442 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 GPC4O75487 556 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 SLCO2B1O94956 709 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 CER1O95813 267 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 TSPAN12O95859 305 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 CATP04040 527 aaKnown RBP8.16□□□□□ -1.1
CNN3-205ENST00000474409 CSF2P04141 144 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 S100BP04271 92 aaPredicted RBP8.16□□□□□ -1.1
CNN3-205ENST00000474409 C8GP07360 202 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 SYPP08247 313 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 MPC1LP0DKB6 136 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 CREB1P16220 341 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 TFEBP19484 476 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 NR1D1P20393 614 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 RPL10P27635 214 aaKnown RBP8.16□□□□□ -1.1
CNN3-205ENST00000474409 MAP4P27816 1152 aaKnown RBP8.16□□□□□ -1.1
CNN3-205ENST00000474409 SLC26A3P40879 764 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 CTSKP43235 329 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 MAPK9P45984 424 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 CSRP3P50461 194 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 CLCNKAP51800 687 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 PPP2R2AP63151 447 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 IRX4P78413 519 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 SLC18A2Q05940 514 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 TCF15Q12870 199 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 DLG1Q12959 904 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 SP140Q13342 867 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 GBX1Q14549 363 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 CCDC153Q494R4 210 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 IL27RAQ6UWB1 636 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 NEK10Q6ZWH5 1172 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 CLEC14AQ86T13 490 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 PDZD3Q86UT5 571 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 GKN2Q86XP6 184 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 VRK3Q8IV63 474 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 PLD6Q8N2A8 252 aaKnown RBP8.16□□□□□ -1.1
CNN3-205ENST00000474409 FSTL5Q8N475 847 aaPredicted RBP8.16□□□□□ -1.1
CNN3-205ENST00000474409 SPATA6LQ8N4H0 392 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 ANKRD42Q8N9B4 389 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 BANPQ8N9N5 519 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 ZNF548Q8NEK5 533 aaPredicted RBP8.16□□□□□ -1.1
CNN3-205ENST00000474409 CFAP61Q8NHU2 1237 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 CCL4L1Q8NHW4 92 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 ATOH1Q92858 354 aaPredicted RBP8.16□□□□□ -1.1
CNN3-205ENST00000474409 NXNL1Q96CM4 212 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 UBXN10Q96LJ8 280 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 RMDN2Q96LZ7 410 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 NUSAP1Q9BXS6 441 aaKnown RBP8.16□□□□□ -1.1
CNN3-205ENST00000474409 ASXL3Q9C0F0 2248 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 IRF2BPLQ9H1B7 796 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 OR52A5Q9H2C5 316 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 ARRDC1-AS1Q9H2J1 176 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 ALG9Q9H6U8 611 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 ERVMER34-1Q9H9K5 563 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 FSCN3Q9NQT6 498 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 IGSF5Q9NSI5 407 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 IMP3Q9NV31 184 aaKnown RBP8.16□□□□□ -1.1
CNN3-205ENST00000474409 ZNF358Q9NW07 568 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 NKIRAS1Q9NYS0 192 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 XPR1Q9UBH6 696 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 GULP1Q9UBP9 304 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 KLF15Q9UIH9 416 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 MID2Q9UJV3 735 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 RNF112Q9ULX5 631 aa8.16□□□□□ -1.1
CNN3-205ENST00000474409 SLC6A14Q9UN76 642 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms