RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 FERD3LQ96RJ6 166 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 OR52A5Q9H2C5 316 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 COG4Q9H9E3 785 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 CHRAC1Q9NRG0 131 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 HRASLS2Q9NWW9 162 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 SEMA5BQ9P283 1151 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 TCAF1Q9Y4C2 921 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 CACNA1GO43497 2377 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 IGHV5-51A0A0C4DH38 117 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 OR5K3A6NET4 321 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 IFRD1O00458 451 aaPredicted RBP10.9□□□□□ -0.66
CKS1B-206ENST00000474215 LIN7AO14910 233 aaPredicted RBP10.9□□□□□ -0.66
CKS1B-206ENST00000474215 ZSCAN12O43309 604 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 RAD1O60671 282 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 STK17BO94768 372 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 FTH1P02794 183 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 MAP4P27816 1152 aaKnown RBP10.9□□□□□ -0.66
CKS1B-206ENST00000474215 PREPP48147 710 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 SESN2P58004 480 aaPredicted RBP10.9□□□□□ -0.66
CKS1B-206ENST00000474215 PPP1CAP62136 330 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 SH3BP2P78314 561 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 PRAMEP78395 509 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 CDK16Q00536 496 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 FASTKD1Q53R41 847 aaKnown RBP10.9□□□□□ -0.66
CKS1B-206ENST00000474215 TAF1BQ53T94 588 aaPredicted RBP10.9□□□□□ -0.66
CKS1B-206ENST00000474215 ARMC6Q6NXE6 501 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 OOSP2Q86WS3 158 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 REXO1L1PQ8IX06 675 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 NLGN4XQ8N0W4 816 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 RASGEF1CQ8N431 466 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 PHC3Q8NDX5 983 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 ACVR1CQ8NER5 493 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 NLGN4YQ8NFZ3 816 aaPredicted RBP10.9□□□□□ -0.66
CKS1B-206ENST00000474215 OR4E2Q8NGC2 313 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 SLC41A2Q96JW4 573 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 OR6C1Q96RD1 312 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 CD180Q99467 661 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 IL22Q9GZX6 179 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 TRIT1Q9H3H1 467 aaKnown RBP10.9□□□□□ -0.66
CKS1B-206ENST00000474215 MVB12BQ9H7P6 319 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 BFARQ9NZS9 450 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 TTC7AQ9ULT0 858 aaPredicted RBP10.9□□□□□ -0.66
CKS1B-206ENST00000474215 TMEM184BQ9Y519 407 aaPredicted RBP10.9□□□□□ -0.66
CKS1B-206ENST00000474215 PCDHGA4Q9Y5G9 962 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 PRSS21Q9Y6M0 314 aa10.9□□□□□ -0.66
CKS1B-206ENST00000474215 UBA6A0AVT1 1052 aaPredicted RBP10.89□□□□□ -0.67
CKS1B-206ENST00000474215 F8W8V4 182 aa10.89□□□□□ -0.67
CKS1B-206ENST00000474215 OR1I1O60431 355 aa10.89□□□□□ -0.67
CKS1B-206ENST00000474215 OR56A5P0C7T3 313 aa10.89□□□□□ -0.67
CKS1B-206ENST00000474215 FGF5P12034 268 aa10.89□□□□□ -0.67
CKS1B-206ENST00000474215 WT1P19544 449 aaPredicted RBP10.89□□□□□ -0.67
CKS1B-206ENST00000474215 PPARGP37231 505 aaPredicted RBP10.89□□□□□ -0.67
CKS1B-206ENST00000474215 ARL4DP49703 201 aa10.89□□□□□ -0.67
CKS1B-206ENST00000474215 CRADDP78560 199 aa10.89□□□□□ -0.67
CKS1B-206ENST00000474215 HSD11B2P80365 405 aa10.89□□□□□ -0.67
CKS1B-206ENST00000474215 BOP1Q14137 746 aaKnown RBP10.89□□□□□ -0.67
CKS1B-206ENST00000474215 DNTTIP2Q5QJE6 756 aaKnown RBP10.89□□□□□ -0.67
CKS1B-206ENST00000474215 TTC27Q6P3X3 843 aa10.89□□□□□ -0.67
CKS1B-206ENST00000474215 ZNF534Q76KX8 674 aa10.89□□□□□ -0.67
CKS1B-206ENST00000474215 TIPARPQ7Z3E1 657 aaKnown RBP10.89□□□□□ -0.67
CKS1B-206ENST00000474215 KMT5CQ86Y97 462 aa10.89□□□□□ -0.67
CKS1B-206ENST00000474215 CARFQ8N187 725 aa10.89□□□□□ -0.67
CKS1B-206ENST00000474215 SIDT2Q8NBJ9 832 aaKnown RBP10.89□□□□□ -0.67
CKS1B-206ENST00000474215 LCN9Q8WX39 176 aa10.89□□□□□ -0.67
CKS1B-206ENST00000474215 ELMO1Q92556 727 aa10.89□□□□□ -0.67
CKS1B-206ENST00000474215 TFGQ92734 400 aaPredicted RBP10.89□□□□□ -0.67
CKS1B-206ENST00000474215 MAGOHBQ96A72 148 aaKnown RBP10.89□□□□□ -0.67
CKS1B-206ENST00000474215 MS4A14Q96JA4 679 aa10.89□□□□□ -0.67
CKS1B-206ENST00000474215 NAP1L3Q99457 506 aaPredicted RBP10.89□□□□□ -0.67
CKS1B-206ENST00000474215 MAP3K3Q99759 626 aa10.89□□□□□ -0.67
CKS1B-206ENST00000474215 SRMSQ9H3Y6 488 aa10.89□□□□□ -0.67
CKS1B-206ENST00000474215 TFB2MQ9H5Q4 396 aaKnown RBP10.89□□□□□ -0.67
CKS1B-206ENST00000474215 ANAPC5Q9UJX4 755 aa10.89□□□□□ -0.67
CKS1B-206ENST00000474215 SLC5A10A0PJK1 596 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 TLCD2A6NGC4 264 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 BHMG1C9JSJ3 638 aaPredicted RBP10.88□□□□□ -0.67
CKS1B-206ENST00000474215 CD3EAPO15446 510 aaKnown RBP10.88□□□□□ -0.67
CKS1B-206ENST00000474215 KRT14P02533 472 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 PRB1P04280 392 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 ITGB2P05107 769 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 LIFP15018 202 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 FOLR1P15328 257 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 POLR2CP19387 275 aaPredicted RBP10.88□□□□□ -0.67
CKS1B-206ENST00000474215 TPSB2P20231 275 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 SARNPP82979 210 aaKnown RBP10.88□□□□□ -0.67
CKS1B-206ENST00000474215 PLOD1Q02809 727 aaPredicted RBP10.88□□□□□ -0.67
CKS1B-206ENST00000474215 ABHD18Q0P651 414 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 GPS1Q13098 491 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 PRKAA1Q13131 559 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 MAP7Q14244 749 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 SEMA3AQ14563 771 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 BRD3Q15059 726 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 TRIP13Q15645 432 aaPredicted RBP10.88□□□□□ -0.67
CKS1B-206ENST00000474215 TPSAB1Q15661 275 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 KCTD19Q17RG1 926 aaPredicted RBP10.88□□□□□ -0.67
CKS1B-206ENST00000474215 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.88□□□□□ -0.67
CKS1B-206ENST00000474215 AARS2Q5JTZ9 985 aaKnown RBP10.88□□□□□ -0.67
CKS1B-206ENST00000474215 LRRC8BQ6P9F7 803 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 CYB5D1Q6P9G0 228 aa10.88□□□□□ -0.67
CKS1B-206ENST00000474215 BPHLQ86WA6 291 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms