RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 NAPRTQ6XQN6 538 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 ABI3BPQ7Z7G0 1075 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 CPLX4Q7Z7G2 160 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 IQCHQ86VS3 1027 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 PARGQ86W56 976 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 KIRREL3Q8IZU9 778 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 TCAIMQ8N3R3 496 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 CCNYL1Q8N7R7 359 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 FRMD1Q8N878 549 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 MFSD2AQ8NA29 543 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 TMEM145Q8NBT3 493 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 OR13H1Q8NG92 308 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 DENND1AQ8TEH3 1009 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 CKAP2Q8WWK9 683 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 GAB3Q8WWW8 586 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 ATL1Q8WXF7 558 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 SLC6A18Q96N87 628 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 SLC30A3Q99726 388 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 C1QTNF1Q9BXJ1 281 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 GSDMCQ9BYG8 508 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 DUSP15Q9H1R2 295 aaPredicted RBP10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 C12orf65Q9H3J6 166 aaKnown RBP10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 EML4Q9HC35 981 aaKnown RBP10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 ARL15Q9NXU5 204 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 UTP6Q9NYH9 597 aaKnown RBP10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 GALPQ9UBC7 116 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 OARD1Q9Y530 152 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 TNPO3Q9Y5L0 923 aaKnown RBP10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 HEBP2Q9Y5Z4 205 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 PRUNE2Q8WUY3 3088 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 ZNF839A8K0R7 811 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 TMEM114B3SHH9 223 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 TCP11X1B4DZS4 312 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 UBXN8O00124 270 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 CDC7O00311 574 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 CRCPO75575 148 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 IPO13O94829 963 aaKnown RBP10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 SNUPNO95149 360 aaKnown RBP10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 GUCA1CO95843 209 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 SERPINE1P05121 402 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 CEACAM5P06731 702 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 TROVE2P10155 538 aaKnown RBP eCLIP10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 BGNP21810 368 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 LSP1P33241 339 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 GMPRP36959 345 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 ETV4P43268 484 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 CSRP3P50461 194 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 AFF3P51826 1226 aaKnown RBP10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 AP1S2P56377 157 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 DLG1Q12959 904 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 ABRQ12979 859 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 BIRC2Q13490 618 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 MPP2Q14168 576 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 NFE2L1Q14494 772 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 PCLAFQ15004 111 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 PFKFB4Q16877 469 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 PYCR3Q53H96 274 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 TMEM207Q6UWW9 146 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 UNC5DQ6UXZ4 953 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 RABEPKQ7Z6M1 372 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 ISCA2Q86U28 154 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 PDZD3Q86UT5 571 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 CRLF3Q8IUI8 442 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 C10orf107Q8IVU9 208 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 TRIM48Q8IWZ4 208 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 PHACTR4Q8IZ21 702 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 SLC22A15Q8IZD6 547 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 OXR1Q8N573 874 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 PHF21BQ96EK2 531 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 CHMP6Q96FZ7 201 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 PDXPQ96GD0 296 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 BMFQ96LC9 184 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 MECRQ9BV79 373 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 FAM107BQ9H098 131 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 PARVBQ9HBI1 364 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 FGF22Q9HCT0 170 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 MRPL40Q9NQ50 206 aaKnown RBP10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 DNAJC28Q9NX36 388 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 MBD1Q9UIS9 605 aaPredicted RBP10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 EMCNQ9ULC0 261 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 RAB23Q9ULC3 237 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 KCNK6Q9Y257 313 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 ASF1AQ9Y294 204 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 STK38LQ9Y2H1 464 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 MED16Q9Y2X0 877 aa10.06□□□□□ -0.8
PRPF38A-202ENST00000474048 DOCK9Q9BZ29 2069 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 THADAQ6YHU6 1953 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 SPTY2D1-AS1A0A0U1RR47 76 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 SLC5A10A0PJK1 596 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 A8MT66 165 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 BCAT2O15382 392 aaPredicted RBP10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 FFAR2O15552 330 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 GPC4O75487 556 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 SLCO2B1O94956 709 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 WISP3O95389 354 aaPredicted RBP10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 DHRS4L1P0CG22 281 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 BCKDHBP21953 392 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 MAOBP27338 520 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 SERPINB5P36952 375 aa10.05□□□□□ -0.8
PRPF38A-202ENST00000474048 ACTR1BP42025 376 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms