RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 ARCN1P48444 511 aaKnown RBP5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 PSMD8P48556 350 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 NT5C2P49902 561 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 GPX6P59796 221 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 DCDC1P59894 354 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 CNTN2Q02246 1040 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 POU5F1BQ06416 359 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 RGS1Q08116 209 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 KLF10Q13118 480 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 KCNC3Q14003 757 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 CLCA4Q14CN2 919 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 TAB1Q15750 504 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 RSPO4Q2I0M5 234 aaPredicted RBP5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 IQCCQ4KMZ1 466 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 SETMARQ53H47 684 aaPredicted RBP5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 ZNF484Q5JVG2 852 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 RBM48Q5RL73 367 aaKnown RBP5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 PRMT9Q6P2P2 845 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 ZNF517Q6ZMY9 492 aaPredicted RBP5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 CFAP77Q6ZQR2 320 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 FRMD5Q7Z6J6 570 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 NLGN2Q8NFZ4 835 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 OR2T34Q8NGX1 318 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 DYNC2LI1Q8TCX1 351 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 SETD7Q8WTS6 366 aaKnown RBP5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 SLC7A6Q92536 515 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 MUL1Q969V5 352 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 C18orf25Q96B23 403 aaPredicted RBP5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 NXNL1Q96CM4 212 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 TMEM68Q96MH6 324 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 BCL2L14Q9BZR8 327 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 C2orf40Q9H1Z8 148 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 MMP27Q9H306 513 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 BTG4Q9NY30 223 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 ZNF224Q9NZL3 707 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 KLHL21Q9UJP4 597 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 TMX2Q9Y320 296 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 RIC1Q4ADV7 1423 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 LTBP1Q14766 1721 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 A0A1B0GTQ1 180 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 DENND3A2RUS2 1198 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 ARGFXA6NJG6 315 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 CLDN3O15551 220 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 SYNCRIPO60506 623 aaKnown RBP5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 TSC22D2O75157 780 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 NDUFS6O75380 124 aaKnown RBP5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 FABP1P07148 127 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 KITP10721 976 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 TNFAIP3P21580 790 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 GARSP41250 739 aaKnown RBP5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 CAPZA2P47755 286 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 GZMKP49863 264 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 NUDT2P50583 147 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 GABARAPL2P60520 117 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 GPC5P78333 572 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 MS4A2Q01362 244 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 PRKCDQ05655 676 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 FSTL1Q12841 308 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 CEACAM7Q14002 265 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 DRAP1Q14919 205 aaPredicted RBP5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 ZMYND11Q15326 602 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 LRRC41Q15345 812 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 GPR19Q15760 415 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 AANATQ16613 207 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 GPATCH4Q5T3I0 446 aaKnown RBP5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 KRT79Q5XKE5 535 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 TFAP2EQ6VUC0 442 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 CBARPQ8N350 705 aaPredicted RBP5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 LIX1Q8N485 282 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 DHRSXQ8N5I4 330 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 OR4M1Q8NGD0 313 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 RP9Q8TA86 221 aaKnown RBP5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 RPL3LQ92901 407 aaKnown RBP5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 ATP6V1E2Q96A05 226 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 CALML4Q96GE6 196 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 CNDP1Q96KN2 507 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 JMJD8Q96S16 334 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 EYA3Q99504 573 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 PLIN2Q99541 437 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 KIFC3Q9BVG8 833 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 TEKT3Q9BXF9 490 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 SEMA6AQ9H2E6 1030 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 C12orf65Q9H3J6 166 aaKnown RBP5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 RNPEPQ9H4A4 650 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 SAV1Q9H4B6 383 aaPredicted RBP5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 PNPLA8Q9NP80 782 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 TOPORSQ9NS56 1045 aaPredicted RBP5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 HPF1Q9NWY4 346 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 FBXL12Q9NXK8 326 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 MARCOQ9UEW3 520 aaPredicted RBP5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 LAMP5Q9UJQ1 280 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 ZFR2Q9UPR6 939 aaKnown RBP5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 BTBD3Q9Y2F9 522 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 CBY1Q9Y3M2 126 aa5.06□□□□□ -1.6
TMEM39A-206ENST00000473684 TCRBV5S4A2TA0A5A2 114 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 TCRBV3S1A0A5B6 114 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 RAB19A4D1S5 217 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 RGSL1A5PLK6 1076 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms