RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 C1orf189Q5VU69 101 aa12.24□□□□□ -0.45
TRAF4-209ENST00000473421 ALKBH5Q6P6C2 394 aaKnown RBP12.24□□□□□ -0.45
TRAF4-209ENST00000473421 CLEC17AQ6ZS10 378 aa12.24□□□□□ -0.45
TRAF4-209ENST00000473421 CDHR3Q6ZTQ4 885 aa12.24□□□□□ -0.45
TRAF4-209ENST00000473421 TRIM73Q86UV7 250 aa12.24□□□□□ -0.45
TRAF4-209ENST00000473421 ZGRF1Q86YA3 2104 aa12.24□□□□□ -0.45
TRAF4-209ENST00000473421 PHC3Q8NDX5 983 aa12.24□□□□□ -0.45
TRAF4-209ENST00000473421 OR8K5Q8NH50 307 aa12.24□□□□□ -0.45
TRAF4-209ENST00000473421 BRSK1Q8TDC3 778 aa12.24□□□□□ -0.45
TRAF4-209ENST00000473421 CPLX3Q8WVH0 158 aa12.24□□□□□ -0.45
TRAF4-209ENST00000473421 DOCK10Q96BY6 2186 aa12.24□□□□□ -0.45
TRAF4-209ENST00000473421 SGSM3Q96HU1 749 aa12.24□□□□□ -0.45
TRAF4-209ENST00000473421 SPRTNQ9H040 489 aaPredicted RBP12.24□□□□□ -0.45
TRAF4-209ENST00000473421 XKR8Q9H6D3 395 aa12.24□□□□□ -0.45
TRAF4-209ENST00000473421 CELSR1Q9NYQ6 3014 aa12.24□□□□□ -0.45
TRAF4-209ENST00000473421 PCDHGA10Q9Y5H3 936 aa12.24□□□□□ -0.45
TRAF4-209ENST00000473421 COPG1Q9Y678 874 aaKnown RBP12.24□□□□□ -0.45
TRAF4-209ENST00000473421 GLYATL1P3A0A0U1RQE8 302 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 GSAPA4D1B5 854 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 MGAT4DA6NG13 374 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 BTN3A1O00481 513 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 E2F3O00716 465 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 LRRTM2O43300 516 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 KCNJ13O60928 360 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 NFKB1P19838 968 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 HLA-DPA1P20036 260 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 CYP2A7P20853 494 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 SPAM1P38567 509 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 GLRBP48167 497 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 DYNLT1P63172 113 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 ADCY2Q08462 1091 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 OLIG2Q13516 323 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 PPP2R5EQ16537 467 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 HIF1AQ16665 826 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 DEFB110Q30KQ9 67 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 DCAF10Q5QP82 559 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 LDLRAP1Q5SW96 308 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 MLIPQ5VWP3 458 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 IGFL3Q6UXB1 125 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 Q6ZS92 163 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 PPP1R32Q7Z5V6 425 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 KCNMB4Q86W47 210 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 MAP7D3Q8IWC1 876 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 GALNT16Q8N428 558 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 TTC13Q8NBP0 860 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 OR2L2Q8NH16 312 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 BLOC1S5Q8TDH9 187 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 UBE2Q2Q8WVN8 375 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 MARVELD3Q96A59 401 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 MRGPRX2Q96LB1 330 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 TEKT5Q96M29 485 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 TRAPPC9Q96Q05 1148 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 MESP1Q9BRJ9 268 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 PITPNM3Q9BZ71 974 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 C1GALT1Q9NS00 363 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 HAUS2Q9NVX0 235 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 C5AR2Q9P296 337 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 CTTNBP2NLQ9P2B4 639 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 CDYLQ9Y232 598 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 ANKRD12Q6UB98 2062 aa12.23□□□□□ -0.45
TRAF4-209ENST00000473421 CNTRLQ7Z7A1 2325 aa12.22□□□□□ -0.45
TRAF4-209ENST00000473421 A0A0A6YYK5 440 aaPredicted RBP12.22□□□□□ -0.45
TRAF4-209ENST00000473421 ZG16O60844 167 aa12.22□□□□□ -0.45
TRAF4-209ENST00000473421 SERPING1P05155 500 aa12.22□□□□□ -0.45
TRAF4-209ENST00000473421 UMODP07911 640 aa12.22□□□□□ -0.45
TRAF4-209ENST00000473421 PECAM1P16284 738 aaPredicted RBP12.22□□□□□ -0.45
TRAF4-209ENST00000473421 ELAVL4P26378 380 aaKnown RBP12.22□□□□□ -0.45
TRAF4-209ENST00000473421 GRNP28799 593 aaKnown RBP12.22□□□□□ -0.45
TRAF4-209ENST00000473421 PBX1P40424 430 aa12.22□□□□□ -0.45
TRAF4-209ENST00000473421 GABRA4P48169 554 aa12.22□□□□□ -0.45
TRAF4-209ENST00000473421 RRADP55042 308 aa12.22□□□□□ -0.45
TRAF4-209ENST00000473421 MESDQ14696 234 aa12.22□□□□□ -0.45
TRAF4-209ENST00000473421 MYBPC3Q14896 1274 aa12.22□□□□□ -0.45
TRAF4-209ENST00000473421 PRKD1Q15139 912 aaPredicted RBP12.22□□□□□ -0.45
TRAF4-209ENST00000473421 ZNF658BQ4V348 819 aaPredicted RBP12.22□□□□□ -0.45
TRAF4-209ENST00000473421 ARMC6Q6NXE6 501 aa12.22□□□□□ -0.45
TRAF4-209ENST00000473421 CFAP206Q8IYR0 622 aa12.22□□□□□ -0.45
TRAF4-209ENST00000473421 RNF25Q96BH1 459 aaPredicted RBP12.22□□□□□ -0.45
TRAF4-209ENST00000473421 ZNF830Q96NB3 372 aaPredicted RBP12.22□□□□□ -0.45
TRAF4-209ENST00000473421 PHF12Q96QT6 1004 aa12.22□□□□□ -0.45
TRAF4-209ENST00000473421 GORASP1Q9BQQ3 440 aa12.22□□□□□ -0.45
TRAF4-209ENST00000473421 ILKAPQ9H0C8 392 aaPredicted RBP12.22□□□□□ -0.45
TRAF4-209ENST00000473421 DEF6Q9H4E7 631 aa12.22□□□□□ -0.45
TRAF4-209ENST00000473421 C10orf88Q9H8K7 445 aa12.22□□□□□ -0.45
TRAF4-209ENST00000473421 SLC22A11Q9NSA0 550 aa12.22□□□□□ -0.45
TRAF4-209ENST00000473421 P4HTMQ9NXG6 502 aa12.22□□□□□ -0.45
TRAF4-209ENST00000473421 DHCR7Q9UBM7 475 aaKnown RBP12.22□□□□□ -0.45
TRAF4-209ENST00000473421 OSGIN2Q9Y236 505 aa12.22□□□□□ -0.45
TRAF4-209ENST00000473421 PTRH2Q9Y3E5 179 aaKnown RBP12.22□□□□□ -0.45
TRAF4-209ENST00000473421 HYOU1Q9Y4L1 999 aa12.22□□□□□ -0.45
TRAF4-209ENST00000473421 ARL5AQ9Y689 179 aa12.22□□□□□ -0.45
TRAF4-209ENST00000473421 DNMT3AQ9Y6K1 912 aaPredicted RBP12.22□□□□□ -0.45
TRAF4-209ENST00000473421 F8P00451 2351 aa12.22□□□□□ -0.45
TRAF4-209ENST00000473421 SNRNP200O75643 2136 aaKnown RBP12.22□□□□□ -0.45
TRAF4-209ENST00000473421 CCDC78A2IDD5 438 aa12.21□□□□□ -0.45
TRAF4-209ENST00000473421 CCL22O00626 93 aa12.21□□□□□ -0.45
TRAF4-209ENST00000473421 APOL1O14791 398 aa12.21□□□□□ -0.45
TRAF4-209ENST00000473421 KRT38O76015 456 aa12.21□□□□□ -0.45
TRAF4-209ENST00000473421 TPBGLP0DKB5 382 aa12.21□□□□□ -0.45
TRAF4-209ENST00000473421 PDHA2P29803 388 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms