RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 ALG1LQ6GMV1 187 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 TAS2R42Q7RTR8 314 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 CHPT1Q8WUD6 406 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 SDCCAG3Q96C92 435 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 EID2BQ96D98 161 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 AURKBQ96GD4 344 aaPredicted RBP20.77■□□□□ 0.92
COL18A1-207ENST00000473212 MBOAT4Q96T53 435 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 AMBRA1Q9C0C7 1298 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 SCUBE2Q9NQ36 999 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 SMPD4Q9NXE4 827 aa20.77■□□□□ 0.92
COL18A1-207ENST00000473212 GRXCR2A6NFK2 248 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 C2orf81A6NN90 581 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 LSM1O15116 133 aaKnown RBP20.76■□□□□ 0.91
COL18A1-207ENST00000473212 ATF6P18850 670 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 RTP2Q5QGT7 225 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 DNAJC14Q6Y2X3 702 aaPredicted RBP20.76■□□□□ 0.91
COL18A1-207ENST00000473212 TAS1R1Q7RTX1 841 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 HDAC2Q92769 488 aaKnown RBP20.76■□□□□ 0.91
COL18A1-207ENST00000473212 DGCR6LQ9BY27 220 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 LIMD1Q9UGP4 676 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 DGKBQ9Y6T7 804 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 GSTA4O15217 222 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 SULT1C4O75897 302 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 GUCA1CO95843 209 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 CST1P01037 141 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 HTR1AP08908 422 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 GDF5P43026 501 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 FLT3LGP49771 235 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 BCAP31P51572 246 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 OXCT1P55809 520 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 PTGR1Q14914 329 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 ABRAXAS2Q15018 415 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 AP5B1Q2VPB7 878 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 C6orf141Q5SZD1 244 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 TTC23Q5W5X9 447 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 PRR23BQ6ZRT6 265 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 CHDHQ8NE62 594 aaPredicted RBP20.76■□□□□ 0.91
COL18A1-207ENST00000473212 OR2T12Q8NG77 320 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 FAM193BQ96PV7 902 aaPredicted RBP20.76■□□□□ 0.91
COL18A1-207ENST00000473212 RAD21L1Q9H4I0 556 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 IKZF5Q9H5V7 419 aa20.76■□□□□ 0.91
COL18A1-207ENST00000473212 AGO1Q9UL18 857 aaKnown RBP20.76■□□□□ 0.91
COL18A1-207ENST00000473212 ANKRD28O15084 1053 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 ADAM12O43184 909 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 PHEXP78562 749 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 CTU2Q2VPK5 515 aaKnown RBP20.75■□□□□ 0.91
COL18A1-207ENST00000473212 PRSS55Q6UWB4 352 aaPredicted RBP20.75■□□□□ 0.91
COL18A1-207ENST00000473212 OR4F6Q8NGB9 312 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 OR10A6Q8NH74 314 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 UGT2B28Q9BY64 529 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 PALMDQ9NP74 551 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 FARSBQ9NSD9 589 aaKnown RBP20.75■□□□□ 0.91
COL18A1-207ENST00000473212 TMEM45AQ9NWC5 275 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 PDE10AQ9Y233 779 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 C16orf96A6NNT2 1141 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 SOBPA7XYQ1 873 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 E5RI56 91 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 OR7A17O14581 309 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 FFAR3O14843 346 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 GPR42O15529 346 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 TBC1D4O60343 1298 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 ACSL4O60488 711 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 HPRP00739 348 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 F11P03951 625 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 IRF1P10914 325 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 CTPS1P17812 591 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 RPL17P18621 184 aaKnown RBP20.75■□□□□ 0.91
COL18A1-207ENST00000473212 AGXTP21549 392 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 LPOP22079 712 aaPredicted RBP20.75■□□□□ 0.91
COL18A1-207ENST00000473212 MAGEA11P43364 429 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 AQP6Q13520 282 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 SPCS2Q15005 226 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 SLC24A5Q71RS6 500 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 IFNL1Q8IU54 200 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 ZNF555Q8NEP9 628 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 ZIC5Q96T25 663 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 THUMPD3Q9BV44 507 aaKnown RBP20.75■□□□□ 0.91
COL18A1-207ENST00000473212 FUNDC2Q9BWH2 189 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 ADGRE2Q9UHX3 823 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 ERGIC3Q9Y282 383 aa20.75■□□□□ 0.91
COL18A1-207ENST00000473212 ANKRD66B4E2M5 251 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 GNGT2O14610 69 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 CKBP12277 381 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 ELNP15502 786 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 RGS21Q2M5E4 152 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 EGFLAMQ63HQ2 1017 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 GOLGA7Q7Z5G4 137 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 IGFN1Q86VF2 1251 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 BHMTQ93088 406 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 MAGED4Q96JG8 741 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 CCDC138Q96M89 665 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 BOCQ9BWV1 1114 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 OSBPL10Q9BXB5 764 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 NSUN3Q9H649 340 aaKnown RBP20.74■□□□□ 0.91
COL18A1-207ENST00000473212 OLA1Q9NTK5 396 aaKnown RBP20.74■□□□□ 0.91
COL18A1-207ENST00000473212 PLXNA4Q9HCM2 1894 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 NUP214P35658 2090 aaPredicted RBP20.74■□□□□ 0.91
COL18A1-207ENST00000473212 MOXD2PA6NHM9 499 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 SEPT4O43236 478 aa20.74■□□□□ 0.91
COL18A1-207ENST00000473212 XYLBO75191 536 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms