RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 CPNE9Q8IYJ1 553 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 SLC22A15Q8IZD6 547 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 CCL4L1Q8NHW4 92 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 CD200R1Q8TD46 325 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 MAGEC3Q8TD91 643 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 ACMSDQ8TDX5 336 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 ZDHHC1Q8WTX9 485 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 CXorf40BQ96DE9 158 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 EDEM2Q9BV94 578 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 WWP1Q9H0M0 922 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 TMEM9BQ9NQ34 198 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 WASH6PQ9NQA3 447 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 CTNNAL1Q9UBT7 734 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 PSMD13Q9UNM6 376 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 NFS1Q9Y697 457 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 COLEC10Q9Y6Z7 277 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 KIR2DS5A0A0G2JLQ3 304 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 A0A0G2JNG1 304 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 KIR2DS3K7RE56 304 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 FFAR2O15552 330 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 PHGDHO43175 533 aaKnown RBP16.5■□□□□ 0.23
CCM2-205ENST00000472223 PCDHGA12O60330 932 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 MPC1LP0DKB6 136 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 F3P13726 295 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 MAP4P27816 1152 aaKnown RBP16.5■□□□□ 0.23
CCM2-205ENST00000472223 RPIAP49247 311 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 ABRQ12979 859 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 SLC14A1Q13336 389 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 KIR2DS5Q14953 304 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 FAM83EQ2M2I3 478 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 DEFB133Q30KQ1 61 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 ACSBG2Q5FVE4 666 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 ABRAXAS1Q6UWZ7 409 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 PRR23CQ6ZRP0 262 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 FAM83HQ6ZRV2 1179 aaPredicted RBP16.5■□□□□ 0.23
CCM2-205ENST00000472223 CMC1Q7Z7K0 106 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 NRROSQ86YC3 692 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 CEP97Q8IW35 865 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 CFAP61Q8NHU2 1237 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 SAP25Q8TEE9 199 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 EEF1AKMT1Q8WVE0 214 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 ANKRD7Q92527 254 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 LINGO1Q96FE5 620 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 C12orf66Q96MD2 445 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 TRIM54Q9BYV2 358 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 IL21RQ9HBE5 538 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 PRDM8Q9NQV8 689 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 DNAAF2Q9NVR5 837 aaKnown RBP16.5■□□□□ 0.23
CCM2-205ENST00000472223 NLGN3Q9NZ94 848 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 NCKIPSDQ9NZQ3 722 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 SENP1Q9P0U3 644 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 GALPQ9UBC7 116 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 TBC1D29Q9UFV1 150 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 LGALS13Q9UHV8 139 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 PCOLCE2Q9UKZ9 415 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 PCDHGB2Q9Y5G2 931 aa16.5■□□□□ 0.23
CCM2-205ENST00000472223 B4DGG1 531 aa16.49■□□□□ 0.23
CCM2-205ENST00000472223 ZW10O43264 779 aa16.49■□□□□ 0.23
CCM2-205ENST00000472223 C2P06681 752 aa16.49■□□□□ 0.23
CCM2-205ENST00000472223 CCDC166P0CW27 439 aa16.49■□□□□ 0.23
CCM2-205ENST00000472223 COL6A2P12110 1019 aa16.49■□□□□ 0.23
CCM2-205ENST00000472223 ZNF37AP17032 561 aaPredicted RBP16.49■□□□□ 0.23
CCM2-205ENST00000472223 NDUFS1P28331 727 aa16.49■□□□□ 0.23
CCM2-205ENST00000472223 ATP6V0D1P61421 351 aa16.49■□□□□ 0.23
CCM2-205ENST00000472223 GPS2Q13227 327 aa16.49■□□□□ 0.23
CCM2-205ENST00000472223 ZKSCAN8Q15776 578 aaPredicted RBP16.49■□□□□ 0.23
CCM2-205ENST00000472223 SLC9B2Q86UD5 537 aa16.49■□□□□ 0.23
CCM2-205ENST00000472223 PDZD3Q86UT5 571 aa16.49■□□□□ 0.23
CCM2-205ENST00000472223 LCA5Q86VQ0 697 aa16.49■□□□□ 0.23
CCM2-205ENST00000472223 GATAD2AQ86YP4 633 aa16.49■□□□□ 0.23
CCM2-205ENST00000472223 ACVR1CQ8NER5 493 aa16.49■□□□□ 0.23
CCM2-205ENST00000472223 MAPK15Q8TD08 544 aa16.49■□□□□ 0.23
CCM2-205ENST00000472223 TFGQ92734 400 aaPredicted RBP16.49■□□□□ 0.23
CCM2-205ENST00000472223 FERD3LQ96RJ6 166 aa16.49■□□□□ 0.23
CCM2-205ENST00000472223 SMC6Q96SB8 1091 aa16.49■□□□□ 0.23
CCM2-205ENST00000472223 IQCGQ9H095 443 aaKnown RBP16.49■□□□□ 0.23
CCM2-205ENST00000472223 NMRAL1Q9HBL8 299 aa16.49■□□□□ 0.23
CCM2-205ENST00000472223 IMP3Q9NV31 184 aaKnown RBP16.49■□□□□ 0.23
CCM2-205ENST00000472223 UCKL1Q9NWZ5 548 aa16.49■□□□□ 0.23
CCM2-205ENST00000472223 GULP1Q9UBP9 304 aa16.49■□□□□ 0.23
CCM2-205ENST00000472223 TSR3Q9UJK0 312 aaKnown RBP16.49■□□□□ 0.23
CCM2-205ENST00000472223 ASF1AQ9Y294 204 aa16.49■□□□□ 0.23
CCM2-205ENST00000472223 MED16Q9Y2X0 877 aa16.49■□□□□ 0.23
CCM2-205ENST00000472223 PCDH15Q96QU1 1955 aa16.49■□□□□ 0.23
CCM2-205ENST00000472223 HMX2A2RU54 273 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 ATP8B1O43520 1251 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 ZBTB14O43829 449 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 VIPP01282 170 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 CATP04040 527 aaKnown RBP16.48■□□□□ 0.23
CCM2-205ENST00000472223 ALDOAP04075 364 aaKnown RBP16.48■□□□□ 0.23
CCM2-205ENST00000472223 C8GP07360 202 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 CELA2BP08218 269 aaPredicted RBP16.48■□□□□ 0.23
CCM2-205ENST00000472223 LTA4HP09960 611 aaKnown RBP16.48■□□□□ 0.23
CCM2-205ENST00000472223 HIST1H2AGP0C0S8 130 aaPredicted RBP16.48■□□□□ 0.23
CCM2-205ENST00000472223 HIST1H2ADP20671 130 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 PDHA2P29803 388 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 CCNFP41002 786 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 CCT5P48643 541 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 CSHL1Q14406 222 aa16.48■□□□□ 0.23
CCM2-205ENST00000472223 ZNF460Q14592 562 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms