RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 DPYSL3Q14195 570 aa18.42■□□□□ 0.54
SORT1-203ENST00000471996 LDLRAP1Q5SW96 308 aa18.42■□□□□ 0.54
SORT1-203ENST00000471996 FCRL6Q6DN72 434 aa18.42■□□□□ 0.54
SORT1-203ENST00000471996 SPNS3Q6ZMD2 512 aa18.42■□□□□ 0.54
SORT1-203ENST00000471996 BNC2Q6ZN30 1099 aaPredicted RBP18.42■□□□□ 0.54
SORT1-203ENST00000471996 NXPE1Q8N323 547 aa18.42■□□□□ 0.54
SORT1-203ENST00000471996 CCNYQ8ND76 341 aa18.42■□□□□ 0.54
SORT1-203ENST00000471996 SPDYE1Q8NFV5 336 aaPredicted RBP18.42■□□□□ 0.54
SORT1-203ENST00000471996 DTX3LQ8TDB6 740 aa18.42■□□□□ 0.54
SORT1-203ENST00000471996 HDAC11Q96DB2 347 aa18.42■□□□□ 0.54
SORT1-203ENST00000471996 SRPK1Q96SB4 655 aaKnown RBP18.42■□□□□ 0.54
SORT1-203ENST00000471996 PITPNM3Q9BZ71 974 aa18.42■□□□□ 0.54
SORT1-203ENST00000471996 TRIM8Q9BZR9 551 aa18.42■□□□□ 0.54
SORT1-203ENST00000471996 LIMA1Q9UHB6 759 aaKnown RBP18.42■□□□□ 0.54
SORT1-203ENST00000471996 ACSL5Q9ULC5 683 aa18.42■□□□□ 0.54
SORT1-203ENST00000471996 MYO6Q9UM54 1294 aa18.42■□□□□ 0.54
SORT1-203ENST00000471996 SPO11Q9Y5K1 396 aa18.42■□□□□ 0.54
SORT1-203ENST00000471996 COLEC10Q9Y6Z7 277 aa18.42■□□□□ 0.54
SORT1-203ENST00000471996 GSAPA4D1B5 854 aa18.41■□□□□ 0.54
SORT1-203ENST00000471996 AGPSO00116 658 aa18.41■□□□□ 0.54
SORT1-203ENST00000471996 DDX3XO00571 662 aaKnown RBP eCLIP18.41■□□□□ 0.543e-26■■■■□ 21
SORT1-203ENST00000471996 JRKO75564 520 aa18.41■□□□□ 0.54
SORT1-203ENST00000471996 NDUFS1P28331 727 aa18.41■□□□□ 0.54
SORT1-203ENST00000471996 HTR1EP28566 365 aa18.41■□□□□ 0.54
SORT1-203ENST00000471996 PBLDP30039 288 aaPredicted RBP18.41■□□□□ 0.54
SORT1-203ENST00000471996 IFI35P80217 286 aaPredicted RBP18.41■□□□□ 0.54
SORT1-203ENST00000471996 DCDP81605 110 aaKnown RBP18.41■□□□□ 0.54
SORT1-203ENST00000471996 OTUD4Q01804 1114 aaKnown RBP18.41■□□□□ 0.54
SORT1-203ENST00000471996 GBE1Q04446 702 aa18.41■□□□□ 0.54
SORT1-203ENST00000471996 SLC10A2Q12908 348 aaPredicted RBP18.41■□□□□ 0.54
SORT1-203ENST00000471996 ZBTB17Q13105 803 aa18.41■□□□□ 0.54
SORT1-203ENST00000471996 ZNF630Q2M218 657 aaPredicted RBP18.41■□□□□ 0.54
SORT1-203ENST00000471996 FAM180AQ6UWF9 173 aa18.41■□□□□ 0.54
SORT1-203ENST00000471996 ZNF571Q7Z3V5 609 aaPredicted RBP18.41■□□□□ 0.54
SORT1-203ENST00000471996 DDHD1Q8NEL9 900 aa18.41■□□□□ 0.54
SORT1-203ENST00000471996 IMP4Q96G21 291 aaKnown RBP18.41■□□□□ 0.54
SORT1-203ENST00000471996 POM121Q96HA1 1249 aa18.41■□□□□ 0.54
SORT1-203ENST00000471996 CNDP1Q96KN2 507 aa18.41■□□□□ 0.54
SORT1-203ENST00000471996 HAUS4Q9H6D7 363 aa18.41■□□□□ 0.54
SORT1-203ENST00000471996 CBX8Q9HC52 389 aa18.41■□□□□ 0.54
SORT1-203ENST00000471996 IL26Q9NPH9 171 aa18.41■□□□□ 0.54
SORT1-203ENST00000471996 OLAHQ9NV23 265 aa18.41■□□□□ 0.54
SORT1-203ENST00000471996 IFT80Q9P2H3 777 aaPredicted RBP18.41■□□□□ 0.54
SORT1-203ENST00000471996 MTORP42345 2549 aa18.41■□□□□ 0.54
SORT1-203ENST00000471996 MDC1Q14676 2089 aaKnown RBP18.4■□□□□ 0.54
SORT1-203ENST00000471996 SEC16AO15027 2179 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 UGT1A9O60656 530 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 CNOT3O75175 753 aaKnown RBP18.4■□□□□ 0.54
SORT1-203ENST00000471996 UMODP07911 640 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 UGT1A6P19224 532 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 UGT1A1P22309 533 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 UGT1A4P22310 534 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 HMGCLP35914 325 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 FOXL2P58012 376 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 TLR1Q15399 786 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 PCSK7Q16549 785 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 C1orf189Q5VU69 101 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 AGAP7PQ5VUJ5 663 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 RHBDD2Q6NTF9 364 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 CDHR3Q6ZTQ4 885 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 NT5DC3Q86UY8 548 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 GPR135Q8IZ08 494 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 BCORP1Q8N888 145 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 ANKRD20A12PQ8NF67 263 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 TADA1Q96BN2 335 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 BTBD6Q96KE9 485 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 AGAP4Q96P64 663 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 ZNF670Q9BS34 389 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 UGT1A7Q9HAW7 530 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 UGT1A10Q9HAW8 530 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 UGT1A8Q9HAW9 530 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 NDOR1Q9UHB4 597 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 AP1M2Q9Y6Q5 423 aa18.4■□□□□ 0.54
SORT1-203ENST00000471996 CCDC66A2RUB6 948 aa18.39■□□□□ 0.53
SORT1-203ENST00000471996 MGAT4DA6NG13 374 aa18.39■□□□□ 0.53
SORT1-203ENST00000471996 PPIDQ08752 370 aaKnown RBP18.39■□□□□ 0.53
SORT1-203ENST00000471996 KRT33BQ14525 404 aa18.39■□□□□ 0.53
SORT1-203ENST00000471996 FNBP1LQ5T0N5 605 aa18.39■□□□□ 0.53
SORT1-203ENST00000471996 FAM182AQ5T1J6 154 aa18.39■□□□□ 0.53
SORT1-203ENST00000471996 PRAMEF13Q5VWM6 474 aa18.39■□□□□ 0.53
SORT1-203ENST00000471996 ZDHHC20Q5W0Z9 365 aa18.39■□□□□ 0.53
SORT1-203ENST00000471996 CCDC70Q6NSX1 233 aa18.39■□□□□ 0.53
SORT1-203ENST00000471996 MRPL14Q6P1L8 145 aaKnown RBP18.39■□□□□ 0.53
SORT1-203ENST00000471996 MRGPRGQ86SM5 289 aa18.39■□□□□ 0.53
SORT1-203ENST00000471996 TMEM151BQ8IW70 566 aa18.39■□□□□ 0.53
SORT1-203ENST00000471996 ZNF808Q8N4W9 903 aaPredicted RBP18.39■□□□□ 0.53
SORT1-203ENST00000471996 ACVR1CQ8NER5 493 aa18.39■□□□□ 0.53
SORT1-203ENST00000471996 PROKR1Q8TCW9 393 aa18.39■□□□□ 0.53
SORT1-203ENST00000471996 NACC2Q96BF6 587 aa18.39■□□□□ 0.53
SORT1-203ENST00000471996 AP1M1Q9BXS5 423 aa18.39■□□□□ 0.53
SORT1-203ENST00000471996 ISCUQ9H1K1 167 aa18.39■□□□□ 0.53
SORT1-203ENST00000471996 SRMSQ9H3Y6 488 aa18.39■□□□□ 0.53
SORT1-203ENST00000471996 SLC6A20Q9NP91 592 aa18.39■□□□□ 0.53
SORT1-203ENST00000471996 SUCOQ9UBS9 1254 aaKnown RBP18.39■□□□□ 0.53
SORT1-203ENST00000471996 IP6K2Q9UHH9 426 aa18.39■□□□□ 0.53
SORT1-203ENST00000471996 CDYLQ9Y232 598 aa18.39■□□□□ 0.53
SORT1-203ENST00000471996 MED13LQ71F56 2210 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 CCDC78A2IDD5 438 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 LRRC10BA6NIK2 292 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 H3BMH7 237 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms