RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 C11orf96Q7Z7L8 435 aa8.9□□□□□ -0.98
CPSF4-211ENST00000471455 RAB43Q86YS6 212 aa8.9□□□□□ -0.98
CPSF4-211ENST00000471455 CNTD1Q8N815 330 aa8.9□□□□□ -0.98
CPSF4-211ENST00000471455 PNPLA2Q96AD5 504 aa8.9□□□□□ -0.98
CPSF4-211ENST00000471455 CLIP3Q96DZ5 547 aa8.9□□□□□ -0.98
CPSF4-211ENST00000471455 IP6K3Q96PC2 410 aa8.9□□□□□ -0.98
CPSF4-211ENST00000471455 MAP3K3Q99759 626 aa8.9□□□□□ -0.98
CPSF4-211ENST00000471455 DPH2Q9BQC3 489 aaPredicted RBP8.9□□□□□ -0.98
CPSF4-211ENST00000471455 SLC7A5P2Q9GIP4 190 aa8.9□□□□□ -0.98
CPSF4-211ENST00000471455 CASS4Q9NQ75 786 aa8.9□□□□□ -0.98
CPSF4-211ENST00000471455 HRASLS2Q9NWW9 162 aa8.9□□□□□ -0.98
CPSF4-211ENST00000471455 GPR83Q9NYM4 423 aa8.9□□□□□ -0.98
CPSF4-211ENST00000471455 TMEM63CQ9P1W3 806 aa8.9□□□□□ -0.98
CPSF4-211ENST00000471455 ACSL5Q9ULC5 683 aa8.9□□□□□ -0.98
CPSF4-211ENST00000471455 PKP3Q9Y446 797 aa8.9□□□□□ -0.98
CPSF4-211ENST00000471455 HEBP2Q9Y5Z4 205 aa8.9□□□□□ -0.98
CPSF4-211ENST00000471455 COLEC10Q9Y6Z7 277 aa8.9□□□□□ -0.98
CPSF4-211ENST00000471455 A0A087X0T9 212 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 GLYATL1P3A0A0U1RQE8 302 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 A1L4Q6 167 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 PMPCBO75439 489 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 EPOP01588 193 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 HBQ1P09105 142 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 FAM228BP0C875 321 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 HLA-DPA1P20036 260 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 MSH3P20585 1137 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 KDELR1P24390 212 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 AKT1P31749 480 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 TAS2R40P59535 323 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 PPP1CAP62136 330 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 SLC10A2Q12908 348 aaPredicted RBP8.89□□□□□ -0.99
CPSF4-211ENST00000471455 ELOAQ14241 798 aaKnown RBP8.89□□□□□ -0.99
CPSF4-211ENST00000471455 KRT33BQ14525 404 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 ATP13A4Q4VNC1 1196 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 KHDC1Q4VXA5 237 aaKnown RBP8.89□□□□□ -0.99
CPSF4-211ENST00000471455 VWA5B1Q5TIE3 1220 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 SLC9A4Q6AI14 798 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 FAM199XQ6PEV8 388 aaPredicted RBP8.89□□□□□ -0.99
CPSF4-211ENST00000471455 ZNF517Q6ZMY9 492 aaPredicted RBP8.89□□□□□ -0.99
CPSF4-211ENST00000471455 GLT6D1Q7Z4J2 308 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 IQCKQ8N0W5 287 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 TTC30BQ8N4P2 665 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 PLD5Q8N7P1 536 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 ENDOVQ8N8Q3 282 aaKnown RBP8.89□□□□□ -0.99
CPSF4-211ENST00000471455 DDHD1Q8NEL9 900 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 GPR150Q8NGU9 434 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 TM9SF4Q92544 642 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 ZNF501Q96CX3 271 aaPredicted RBP8.89□□□□□ -0.99
CPSF4-211ENST00000471455 SGSM3Q96HU1 749 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 DHRS4Q9BTZ2 278 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 NLNQ9BYT8 704 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 CHST8Q9H2A9 424 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 GLOD4Q9HC38 313 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 SMOXQ9NWM0 555 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 C5AR2Q9P296 337 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 FAM153AQ9UHL3 310 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 TCFL5Q9UL49 500 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 BTRCQ9Y297 605 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 WDR37Q9Y2I8 494 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 LUC7L2Q9Y383 392 aaKnown RBP8.89□□□□□ -0.99
CPSF4-211ENST00000471455 SHANK1Q9Y566 2161 aa8.89□□□□□ -0.99
CPSF4-211ENST00000471455 FAM181BA6NEQ2 426 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 MGAT4DA6NG13 374 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 OR2AG2A6NM03 316 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 TCP11X1B4DZS4 312 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 SEMA7AO75326 666 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 IPO13O94829 963 aaKnown RBP8.88□□□□□ -0.99
CPSF4-211ENST00000471455 KRT1P04264 644 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 CD63P08962 238 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 RALBP11234 206 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 CYP2A7P20853 494 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 AGXTP21549 392 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 CDH3P22223 829 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 PBLDP30039 288 aaPredicted RBP8.88□□□□□ -0.99
CPSF4-211ENST00000471455 NR2C2P49116 596 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 PSMA6P60900 246 aaKnown RBP8.88□□□□□ -0.99
CPSF4-211ENST00000471455 GPS2Q13227 327 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 LAMB3Q13751 1172 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 NR1I3Q14994 352 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 GPR19Q15760 415 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 TEX44Q53QW1 395 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 GPRC6AQ5T6X5 926 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 LYPLAL1Q5VWZ2 237 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 METRNLQ641Q3 311 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 SLC6A19Q695T7 634 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 TMEM220Q6QAJ8 160 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 FAM151BQ6UXP7 276 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 RFX6Q8HWS3 928 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 ANKMY2Q8IV38 441 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 DSELQ8IZU8 1212 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 RASGEF1AQ8N9B8 481 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 GLIS1Q8NBF1 620 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 FDCSPQ8NFU4 85 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 ADAMTS17Q8TE56 1095 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 RAPGEF5Q92565 580 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 TADA1Q96BN2 335 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 FER1L6-AS2Q96M78 137 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 C12orf66Q96MD2 445 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 C5orf34Q96MH7 638 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 OLFM3Q96PB7 478 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms