RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 LRFN3Q9BTN0 628 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 OSBPL10Q9BXB5 764 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 CAPS2Q9BXY5 557 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 SLC7A5P2Q9GIP4 190 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 CAAP1Q9H8G2 361 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 CARS2Q9HA77 564 aaKnown RBP6.74□□□□□ -1.33
SCAF4-204ENST00000467731 GPAMQ9HCL2 828 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 PCMTD2Q9NV79 361 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 KLQ9UEF7 1012 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 NOVA2Q9UNW9 492 aaKnown RBP6.74□□□□□ -1.33
SCAF4-204ENST00000467731 R4GN57 208 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 A0A096LPK6 155 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 TLR4O00206 839 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 FTH1P02794 183 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 C2P06681 752 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 MSL3P1P0C860 447 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 FOSL1P15407 271 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 CREB1P16220 341 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 ZNF37AP17032 561 aaPredicted RBP6.74□□□□□ -1.33
SCAF4-204ENST00000467731 CD9P21926 228 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 PBLDP30039 288 aaPredicted RBP6.74□□□□□ -1.33
SCAF4-204ENST00000467731 ATP5DP30049 168 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 GNPDA1P46926 289 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 CLCN2P51788 898 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 NUBP1P53384 320 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 IRF9Q00978 393 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 OVGP1Q12889 678 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 DNAJC3Q13217 504 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 BOP1Q14137 746 aaKnown RBP6.74□□□□□ -1.33
SCAF4-204ENST00000467731 FZD2Q14332 565 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 PYCR3Q53H96 274 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 ZNF542PQ5EBM4 170 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 PAQR3Q6TCH7 311 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 SH2D5Q6ZV89 423 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 CHST15Q7LFX5 561 aaPredicted RBP6.74□□□□□ -1.33
SCAF4-204ENST00000467731 EXOC3L1Q86VI1 746 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 GALNT13Q8IUC8 556 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 LILRA3Q8N6C8 439 aaPredicted RBP6.74□□□□□ -1.33
SCAF4-204ENST00000467731 VPS37AQ8NEZ2 397 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 LZICQ8WZA0 190 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 ELMO1Q92556 727 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 TSPAN17Q96FV3 270 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 SCARF2Q96GP6 870 aaPredicted RBP6.74□□□□□ -1.33
SCAF4-204ENST00000467731 ATP6V1G3Q96LB4 118 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 TRMT6Q9UJA5 497 aaKnown RBP6.74□□□□□ -1.33
SCAF4-204ENST00000467731 PILRBQ9UKJ0 227 aa6.74□□□□□ -1.33
SCAF4-204ENST00000467731 MAGEC1O60732 1142 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 POP7O75817 140 aaKnown RBP6.73□□□□□ -1.33
SCAF4-204ENST00000467731 SLC34A2O95436 690 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 AOAHP28039 575 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 SKIV2L2P42285 1042 aaKnown RBP6.73□□□□□ -1.33
SCAF4-204ENST00000467731 SRP54P61011 504 aaKnown RBP6.73□□□□□ -1.33
SCAF4-204ENST00000467731 MAGOHP61326 146 aaKnown RBP6.73□□□□□ -1.33
SCAF4-204ENST00000467731 HSPA14Q0VDF9 509 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 TCEA2Q15560 299 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 INSCQ1MX18 579 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 ALG11Q2TAA5 492 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 UGT3A1Q6NUS8 523 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 NANOGNBQ7Z5D8 188 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 PARGQ86W56 976 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 HID1Q8IV36 788 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 CPNE9Q8IYJ1 553 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 SPATA6LQ8N4H0 392 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 ANKRD49Q8WVL7 239 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 LINC00615Q96LM1 132 aaPredicted RBP6.73□□□□□ -1.33
SCAF4-204ENST00000467731 CCM2Q9BSQ5 444 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 TSSK1BQ9BXA7 367 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 SLC13A1Q9BZW2 595 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 UNKQ9C0B0 810 aaKnown RBP6.73□□□□□ -1.33
SCAF4-204ENST00000467731 STMN4Q9H169 189 aaPredicted RBP6.73□□□□□ -1.33
SCAF4-204ENST00000467731 VPS11Q9H270 941 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 SLC23A2Q9UGH3 650 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 KLF15Q9UIH9 416 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 DNAJC16Q9Y2G8 782 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 DHRS7Q9Y394 339 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 GPSM3Q9Y4H4 160 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 ST14Q9Y5Y6 855 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 ARID1BQ8NFD5 2236 aaPredicted RBP6.73□□□□□ -1.33
SCAF4-204ENST00000467731 F8W8V4 182 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 TNFRSF10CO14798 259 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 KMOO15229 486 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 SMIM24O75264 130 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 WISP3O95389 354 aaPredicted RBP6.73□□□□□ -1.33
SCAF4-204ENST00000467731 ACP5P13686 325 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 GNSP15586 552 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 CRABP2P29373 138 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 HK3P52790 923 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 PPARDQ03181 441 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 EIF2B5Q13144 721 aaKnown RBP6.73□□□□□ -1.33
SCAF4-204ENST00000467731 NFE2L1Q14494 772 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 ZNF658BQ4V348 819 aaPredicted RBP6.73□□□□□ -1.33
SCAF4-204ENST00000467731 TAF1BQ53T94 588 aaPredicted RBP6.73□□□□□ -1.33
SCAF4-204ENST00000467731 AGBL2Q5U5Z8 902 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 AMZ2Q86W34 360 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 DCP2Q8IU60 420 aaKnown RBP6.73□□□□□ -1.33
SCAF4-204ENST00000467731 SYT12Q8IV01 421 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 CENPLQ8N0S6 344 aaPredicted RBP6.73□□□□□ -1.33
SCAF4-204ENST00000467731 PLD6Q8N2A8 252 aaKnown RBP6.73□□□□□ -1.33
SCAF4-204ENST00000467731 ZBTB2Q8N680 514 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 ZBTB8BQ8NAP8 495 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms