RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 CACNB4O00305 520 aaPredicted RBP3.67□□□□□ -1.82
VPS50-209ENST00000467326 RIPK2O43353 540 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 XPNPEP2O43895 674 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 PEX11AO75192 247 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 OLFM2O95897 454 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 IGLV2-11P01706 119 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 EIF2S1P05198 315 aaKnown RBP3.67□□□□□ -1.82
VPS50-209ENST00000467326 FYNP06241 537 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 ABCB1P08183 1280 aaPredicted RBP3.67□□□□□ -1.82
VPS50-209ENST00000467326 ERCC2P18074 760 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 TMOD1P28289 359 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 USP8P40818 1118 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 MTHFRP42898 656 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 GMFBP60983 142 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 SLC20A2Q08357 652 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 PTK6Q13882 451 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 RCN2Q14257 317 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 DRAP1Q14919 205 aaPredicted RBP3.67□□□□□ -1.82
VPS50-209ENST00000467326 USP41Q3LFD5 358 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 CCDC40Q4G0X9 1142 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 KRBOX4Q5JUW0 171 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 TEX35Q5T0J7 233 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 GFI1BQ5VTD9 330 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 ETFRF1Q6IPR1 90 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 KLHL35Q6PF15 583 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 NCEH1Q6PIU2 408 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 PQLC2Q6ZP29 291 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 DENND5BQ6ZUT9 1274 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 LPCAT2Q7L5N7 544 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 SMIM29Q86T20 159 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 SATL1Q86VE3 508 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 MAB21L3Q8N8X9 362 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 BBS10Q8TAM1 723 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 DUSP19Q8WTR2 217 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 NR4A3Q92570 626 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 SLC22A18Q96BI1 424 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 SAT2Q96F10 170 aaPredicted RBP3.67□□□□□ -1.82
VPS50-209ENST00000467326 NEK1Q96PY6 1258 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 GSDMAQ96QA5 445 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 EPYCQ99645 322 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 TMEM47Q9BQJ4 181 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 CRACR2AQ9BSW2 395 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 MRPL1Q9BYD6 325 aaKnown RBP3.67□□□□□ -1.82
VPS50-209ENST00000467326 ABCG8Q9H221 673 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.67□□□□□ -1.82
VPS50-209ENST00000467326 ABCB8Q9NUT2 735 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 COX16Q9P0S2 106 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 CGNQ9P2M7 1197 aaKnown RBP3.67□□□□□ -1.82
VPS50-209ENST00000467326 DNAJB9Q9UBS3 223 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 TSPYL4Q9UJ04 414 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 MKLN1Q9UL63 735 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 AURKCQ9UQB9 309 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 CHKBQ9Y259 395 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 TRPV2Q9Y5S1 764 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 CAPN7Q9Y6W3 813 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 CGNL1Q0VF96 1302 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 KDM3AQ9Y4C1 1321 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 A0A1W2PRV1 198 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 SYCE3A1L190 88 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 CTAGE9A4FU28 777 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 K7EPI3 171 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 SGK1O00141 431 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 VCYO14598 125 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 SMPD2O60906 423 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 RTN2O75298 545 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 REC8O95072 547 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 TPOP07202 933 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 TOP1P11387 765 aaKnown RBP3.66□□□□□ -1.82
VPS50-209ENST00000467326 CETPP11597 493 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 RARGP13631 454 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 HLA-DOBP13765 273 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 FERP16591 822 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 ITGA2P17301 1181 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 ARF4P18085 180 aaPredicted RBP3.66□□□□□ -1.82
VPS50-209ENST00000467326 TYMPP19971 482 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 S1PR1P21453 382 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 CPT2P23786 658 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 CCNCP24863 283 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 PBLDP30039 288 aaPredicted RBP3.66□□□□□ -1.82
VPS50-209ENST00000467326 ADSSP30520 456 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 GNL1P36915 607 aaPredicted RBP3.66□□□□□ -1.82
VPS50-209ENST00000467326 IL15P40933 162 aaPredicted RBP3.66□□□□□ -1.82
VPS50-209ENST00000467326 GARSP41250 739 aaKnown RBP3.66□□□□□ -1.82
VPS50-209ENST00000467326 NRIP1P48552 1158 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 LUMP51884 338 aaPredicted RBP3.66□□□□□ -1.82
VPS50-209ENST00000467326 FUT6P51993 359 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 CDH8P55286 799 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 STARD6P59095 220 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 DMTNQ08495 405 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 ARL16Q0P5N6 197 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 MED22Q15528 200 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 TYSND1Q2T9J0 566 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 KCNT1Q5JUK3 1230 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 CCDC183Q5T5S1 534 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 STPG1Q5TH74 334 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 CST9LP1Q5W188 147 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 FRG2Q64ET8 278 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 CDC73Q6P1J9 531 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 TRAT1Q6PIZ9 186 aa3.66□□□□□ -1.82
VPS50-209ENST00000467326 ANGPTL8Q6UXH0 198 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms