RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 TRIOO75962 3097 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 PIKFYVEQ9Y2I7 2098 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 VCANP13611 3396 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 ATP6AP2A0A1C7CYW4 349 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 A0A1W2PQF6 199 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 EIF4E1BA6NMX2 242 aaKnown RBP14.28□□□□□ -0.12
COL5A1-205ENST00000464187 AGAP14A8MT82 685 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 BTN3A1O00481 513 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 AZIN1O14977 448 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 GPC4O75487 556 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 ATP6AP2O75787 350 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 RPS17P08708 135 aaKnown RBP14.28□□□□□ -0.12
COL5A1-205ENST00000464187 ALDOCP09972 364 aaKnown RBP14.28□□□□□ -0.12
COL5A1-205ENST00000464187 DRD3P35462 400 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 ATP4BP51164 291 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 CCINQ13939 588 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 GPR33Q49SQ1 333 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 FBXO43Q4G163 708 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 ATP13A5Q4VNC0 1218 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 AGKQ53H12 422 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 REP15Q6BDI9 236 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 SERPINA9Q86WD7 417 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 AADATQ8N5Z0 425 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 TRPC4APQ8TEL6 797 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 TWIST2Q8WVJ9 160 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 SCAMP4Q969E2 229 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 KCNA7Q96RP8 456 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 UTP6Q9NYH9 597 aaKnown RBP14.28□□□□□ -0.12
COL5A1-205ENST00000464187 CRLS1Q9UJA2 301 aa14.28□□□□□ -0.12
COL5A1-205ENST00000464187 A0A1B0GTL3 188 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 PSMD11O00231 422 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 FBP2O00757 339 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 PIP5K1BO14986 540 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 KLK8O60259 260 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 ADH1BP00325 375 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 C5AR1P21730 350 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 ACRV1P26436 265 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 PTGER3P43115 390 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 ADARP55265 1226 aaKnown RBP14.27□□□□□ -0.12
COL5A1-205ENST00000464187 DCDC1P59894 354 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 CLCQ05315 142 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 CDC16Q13042 620 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 ACOX1Q15067 660 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 FBXO48Q5FWF7 155 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 PIP5KL1Q5T9C9 394 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 ZNF776Q68DI1 518 aaPredicted RBP14.27□□□□□ -0.12
COL5A1-205ENST00000464187 TECPR1Q7Z6L1 1165 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 RPLP0P6Q8NHW5 317 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 RAB7BQ96AH8 199 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 LINGO1Q96FE5 620 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 ECSITQ9BQ95 431 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 SPATA16Q9BXB7 569 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 MRPL1Q9BYD6 325 aaKnown RBP14.27□□□□□ -0.12
COL5A1-205ENST00000464187 P2RY12Q9H244 342 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 FAM83DQ9H4H8 585 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 AKTIPQ9H8T0 292 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 CCDC167Q9P0B6 97 aa14.27□□□□□ -0.12
COL5A1-205ENST00000464187 NDRG2Q9UN36 371 aaKnown RBP14.27□□□□□ -0.12
COL5A1-205ENST00000464187 SYCE1LA8MT33 242 aa14.27□□□□□ -0.13
COL5A1-205ENST00000464187 COL9A1P20849 921 aa14.27□□□□□ -0.13
COL5A1-205ENST00000464187 RPS14P62263 151 aaKnown RBP14.27□□□□□ -0.13
COL5A1-205ENST00000464187 LCP2Q13094 533 aa14.27□□□□□ -0.13
COL5A1-205ENST00000464187 LRP8Q14114 963 aa14.27□□□□□ -0.13
COL5A1-205ENST00000464187 FLOT2Q14254 428 aa14.27□□□□□ -0.13
COL5A1-205ENST00000464187 MLF2Q15773 248 aaPredicted RBP14.27□□□□□ -0.13
COL5A1-205ENST00000464187 HENMT1Q5T8I9 393 aaKnown RBP14.27□□□□□ -0.13
COL5A1-205ENST00000464187 IRGCQ6NXR0 463 aa14.27□□□□□ -0.13
COL5A1-205ENST00000464187 PHYKPLQ8IUZ5 450 aa14.27□□□□□ -0.13
COL5A1-205ENST00000464187 CPNE9Q8IYJ1 553 aa14.27□□□□□ -0.13
COL5A1-205ENST00000464187 NXPE1Q8N323 547 aa14.27□□□□□ -0.13
COL5A1-205ENST00000464187 RNF148Q8N7C7 305 aa14.27□□□□□ -0.13
COL5A1-205ENST00000464187 OR9I1Q8NGQ6 314 aa14.27□□□□□ -0.13
COL5A1-205ENST00000464187 MAFAQ8NHW3 353 aaPredicted RBP14.27□□□□□ -0.13
COL5A1-205ENST00000464187 EEF1AKMT1Q8WVE0 214 aa14.27□□□□□ -0.13
COL5A1-205ENST00000464187 KCNJ9Q92806 393 aa14.27□□□□□ -0.13
COL5A1-205ENST00000464187 BOCQ9BWV1 1114 aa14.27□□□□□ -0.13
COL5A1-205ENST00000464187 TUBB1Q9H4B7 451 aa14.27□□□□□ -0.13
COL5A1-205ENST00000464187 RAD18Q9NS91 495 aa14.27□□□□□ -0.13
COL5A1-205ENST00000464187 GIMAP2Q9UG22 337 aa14.27□□□□□ -0.13
COL5A1-205ENST00000464187 SERGEFQ9UGK8 458 aa14.27□□□□□ -0.13
COL5A1-205ENST00000464187 PCDHGA7Q9Y5G6 932 aa14.27□□□□□ -0.13
COL5A1-205ENST00000464187 FADS3Q9Y5Q0 445 aa14.27□□□□□ -0.13
COL5A1-205ENST00000464187 COMMD10Q9Y6G5 202 aa14.27□□□□□ -0.13
COL5A1-205ENST00000464187 ATG2BQ96BY7 2078 aa14.26□□□□□ -0.13
COL5A1-205ENST00000464187 A0A1W2PP55 124 aa14.26□□□□□ -0.13
COL5A1-205ENST00000464187 NCF1BA6NI72 391 aaPredicted RBP14.26□□□□□ -0.13
COL5A1-205ENST00000464187 NCF1CA8MVU1 366 aaPredicted RBP14.26□□□□□ -0.13
COL5A1-205ENST00000464187 STX16O14662 325 aa14.26□□□□□ -0.13
COL5A1-205ENST00000464187 PRMT5O14744 637 aaPredicted RBP14.26□□□□□ -0.13
COL5A1-205ENST00000464187 WNT9AO14904 365 aa14.26□□□□□ -0.13
COL5A1-205ENST00000464187 SMNDC1O75940 238 aaKnown RBP eCLIP14.26□□□□□ -0.13
COL5A1-205ENST00000464187 ESR1P03372 595 aa14.26□□□□□ -0.13
COL5A1-205ENST00000464187 SNRPB2P08579 225 aaKnown RBP14.26□□□□□ -0.13
COL5A1-205ENST00000464187 NCF1P14598 390 aaPredicted RBP14.26□□□□□ -0.13
COL5A1-205ENST00000464187 ZNF7P17097 686 aaPredicted RBP14.26□□□□□ -0.13
COL5A1-205ENST00000464187 ME2P23368 584 aa14.26□□□□□ -0.13
COL5A1-205ENST00000464187 MSX2P35548 267 aaPredicted RBP14.26□□□□□ -0.13
COL5A1-205ENST00000464187 AGTR2P50052 363 aa14.26□□□□□ -0.13
COL5A1-205ENST00000464187 HK3P52790 923 aa14.26□□□□□ -0.13
COL5A1-205ENST00000464187 PSME3P61289 254 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms