RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 PLAC1Q9HBJ0 212 aa19.36■□□□□ 0.69
COL9A3-204ENST00000463487 SCHIP1Q9P0W5 487 aaPredicted RBP19.36■□□□□ 0.69
COL9A3-204ENST00000463487 ZNF624Q9P2J8 865 aaPredicted RBP19.36■□□□□ 0.69
COL9A3-204ENST00000463487 SLC5A10A0PJK1 596 aa19.35■□□□□ 0.69
COL9A3-204ENST00000463487 DUX1O43812 170 aa19.35■□□□□ 0.69
COL9A3-204ENST00000463487 VPS26AO75436 327 aa19.35■□□□□ 0.69
COL9A3-204ENST00000463487 HAUS5O94927 633 aa19.35■□□□□ 0.69
COL9A3-204ENST00000463487 SLU7O95391 586 aaKnown RBP19.35■□□□□ 0.69
COL9A3-204ENST00000463487 ADRB1P08588 477 aa19.35■□□□□ 0.69
COL9A3-204ENST00000463487 AOAHP28039 575 aa19.35■□□□□ 0.69
COL9A3-204ENST00000463487 SSTR1P30872 391 aa19.35■□□□□ 0.69
COL9A3-204ENST00000463487 CCR7P32248 378 aa19.35■□□□□ 0.69
COL9A3-204ENST00000463487 SLC19A1P41440 591 aa19.35■□□□□ 0.69
COL9A3-204ENST00000463487 PREPP48147 710 aa19.35■□□□□ 0.69
COL9A3-204ENST00000463487 INSM1Q01101 510 aaPredicted RBP19.35■□□□□ 0.69
COL9A3-204ENST00000463487 SLMAPQ14BN4 828 aa19.35■□□□□ 0.69
COL9A3-204ENST00000463487 MAP9Q49MG5 647 aa19.35■□□□□ 0.69
COL9A3-204ENST00000463487 CAPRIN2Q6IMN6 1127 aaKnown RBP19.35■□□□□ 0.69
COL9A3-204ENST00000463487 KLHL35Q6PF15 583 aa19.35■□□□□ 0.69
COL9A3-204ENST00000463487 RBM44Q6ZP01 1051 aaKnown RBP19.35■□□□□ 0.69
COL9A3-204ENST00000463487 RELL1Q8IUW5 271 aa19.35■□□□□ 0.69
COL9A3-204ENST00000463487 LILRA3Q8N6C8 439 aaPredicted RBP19.35■□□□□ 0.69
COL9A3-204ENST00000463487 EIF1ADQ8N9N8 165 aaKnown RBP19.35■□□□□ 0.69
COL9A3-204ENST00000463487 DEPDC7Q96QD5 511 aa19.35■□□□□ 0.69
COL9A3-204ENST00000463487 OR52A5Q9H2C5 316 aa19.35■□□□□ 0.69
COL9A3-204ENST00000463487 SLC40A1Q9NP59 571 aa19.35■□□□□ 0.69
COL9A3-204ENST00000463487 KLHL42Q9P2K6 505 aa19.35■□□□□ 0.69
COL9A3-204ENST00000463487 NIPSNAP2O75323 286 aa19.34■□□□□ 0.69
COL9A3-204ENST00000463487 JUPP14923 745 aa19.34■□□□□ 0.69
COL9A3-204ENST00000463487 PLCL1Q15111 1095 aa19.34■□□□□ 0.69
COL9A3-204ENST00000463487 ZNF789Q5FWF6 425 aa19.34■□□□□ 0.69
COL9A3-204ENST00000463487 HES3Q5TGS1 186 aa19.34■□□□□ 0.69
COL9A3-204ENST00000463487 TMEM26Q6ZUK4 368 aa19.34■□□□□ 0.69
COL9A3-204ENST00000463487 SLC22A15Q8IZD6 547 aa19.34■□□□□ 0.69
COL9A3-204ENST00000463487 CACTIN-AS1Q8N1I8 211 aa19.34■□□□□ 0.69
COL9A3-204ENST00000463487 CHCHD4Q8N4Q1 142 aa19.34■□□□□ 0.69
COL9A3-204ENST00000463487 SPDYE1Q8NFV5 336 aaPredicted RBP19.34■□□□□ 0.69
COL9A3-204ENST00000463487 SKA2Q8WVK7 121 aaPredicted RBP19.34■□□□□ 0.69
COL9A3-204ENST00000463487 TFGQ92734 400 aaPredicted RBP19.34■□□□□ 0.69
COL9A3-204ENST00000463487 RMDN2Q96LZ7 410 aa19.34■□□□□ 0.69
COL9A3-204ENST00000463487 FOPNLQ96NB1 174 aa19.34■□□□□ 0.69
COL9A3-204ENST00000463487 INSM2Q96T92 566 aaPredicted RBP19.34■□□□□ 0.69
COL9A3-204ENST00000463487 AARSD1Q9BTE6 412 aaKnown RBP19.34■□□□□ 0.69
COL9A3-204ENST00000463487 MVB12BQ9H7P6 319 aa19.34■□□□□ 0.69
COL9A3-204ENST00000463487 TAS2R13Q9NYV9 303 aa19.34■□□□□ 0.69
COL9A3-204ENST00000463487 RABGEF1Q9UJ41 708 aa19.34■□□□□ 0.69
COL9A3-204ENST00000463487 CLCA2Q9UQC9 943 aa19.34■□□□□ 0.69
COL9A3-204ENST00000463487 CFAP20Q9Y6A4 193 aaKnown RBP19.34■□□□□ 0.69
COL9A3-204ENST00000463487 TCRBV9S1A1TA0A576 114 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 TMX2-CTNND1H3BSU7 103 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 GPC4O75487 556 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 SLCO2B1O94956 709 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 CPNE6O95741 557 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 AHSGP02765 367 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 PDHA2P29803 388 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 ATP5DP30049 168 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 CSE1LP55060 971 aaKnown RBP19.33■□□□□ 0.68
COL9A3-204ENST00000463487 OR1D5P58170 312 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 CCL7P80098 99 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 NAB1Q13506 487 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 AMZ1Q400G9 498 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 CNSTQ6PJW8 725 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 STRA8Q7Z7C7 330 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 PIM3Q86V86 326 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 ZBTB2Q8N680 514 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 LKAAEAR1Q8TD35 194 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 GRAMD1AQ96CP6 724 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 FERD3LQ96RJ6 166 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 TRIT1Q9H3H1 467 aaKnown RBP19.33■□□□□ 0.68
COL9A3-204ENST00000463487 LRRC4CQ9HCJ2 640 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 LATS2Q9NRM7 1088 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 POLG2Q9UHN1 485 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 NFU1Q9UMS0 254 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 ASF1AQ9Y294 204 aa19.33■□□□□ 0.68
COL9A3-204ENST00000463487 IGHV1OR21-1A0A087WYE8 117 aa19.32■□□□□ 0.68
COL9A3-204ENST00000463487 NTN3O00634 580 aaPredicted RBP19.32■□□□□ 0.68
COL9A3-204ENST00000463487 MT-CO3P00414 261 aa19.32■□□□□ 0.68
COL9A3-204ENST00000463487 AMD1P17707 334 aa19.32■□□□□ 0.68
COL9A3-204ENST00000463487 SKIV2L2P42285 1042 aaKnown RBP19.32■□□□□ 0.68
COL9A3-204ENST00000463487 MAPK9P45984 424 aa19.32■□□□□ 0.68
COL9A3-204ENST00000463487 GPR18Q14330 331 aa19.32■□□□□ 0.68
COL9A3-204ENST00000463487 LRRC8EQ6NSJ5 796 aa19.32■□□□□ 0.68
COL9A3-204ENST00000463487 FAM45BPQ6NSW5 357 aa19.32■□□□□ 0.68
COL9A3-204ENST00000463487 TTC23LQ6PF05 361 aa19.32■□□□□ 0.68
COL9A3-204ENST00000463487 TMPRSS7Q7RTY8 843 aa19.32■□□□□ 0.68
COL9A3-204ENST00000463487 CTAGE3PQ8IX95 158 aa19.32■□□□□ 0.68
COL9A3-204ENST00000463487 FAM45AQ8TCE6 357 aa19.32■□□□□ 0.68
COL9A3-204ENST00000463487 TMEM74Q96NL1 305 aa19.32■□□□□ 0.68
COL9A3-204ENST00000463487 CPNE1Q99829 537 aa19.32■□□□□ 0.68
COL9A3-204ENST00000463487 KIR3DX1Q9H7L2 352 aa19.32■□□□□ 0.68
COL9A3-204ENST00000463487 TRMT6Q9UJA5 497 aaKnown RBP19.32■□□□□ 0.68
COL9A3-204ENST00000463487 D6RAR5 112 aa19.31■□□□□ 0.68
COL9A3-204ENST00000463487 HYAL3O43820 417 aaPredicted RBP19.31■□□□□ 0.68
COL9A3-204ENST00000463487 UBXN7O94888 489 aa19.31■□□□□ 0.68
COL9A3-204ENST00000463487 CBSLP0DN79 551 aa19.31■□□□□ 0.68
COL9A3-204ENST00000463487 ENO3P13929 434 aaPredicted RBP19.31■□□□□ 0.68
COL9A3-204ENST00000463487 CBSP35520 551 aa19.31■□□□□ 0.68
COL9A3-204ENST00000463487 GPX6P59796 221 aa19.31■□□□□ 0.68
COL9A3-204ENST00000463487 FOXK2Q01167 660 aa19.31■□□□□ 0.68
COL9A3-204ENST00000463487 XKR5Q6UX68 686 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms