RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 ZNF235Q14590 738 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 GPNMBQ14956 572 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 NKG7Q16617 165 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 SULT1C3Q6IMI6 304 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 MRNIPQ6NTE8 343 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 TXNDC11Q6PKC3 985 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 KIAA0408Q6ZU52 694 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 PAGE2Q7Z2X7 111 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 OR4L1Q8NH43 312 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 PROKR1Q8TCW9 393 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 RAB2BQ8WUD1 216 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 CHPT1Q8WUD6 406 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 SH3YL1Q96HL8 342 aaPredicted RBP12.24□□□□□ -0.45
HDAC4-208ENST00000463007 AMBRA1Q9C0C7 1298 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 SLC25A51Q9H1U9 297 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 TLR9Q9NR96 1032 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 VAPAQ9P0L0 249 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 CPQQ9Y646 472 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 GBF1Q92538 1859 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 ANKRD36A6QL64 1941 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 LINC00854A0A1B0GVQ3 168 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 MROH6A6NGR9 719 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 LDB2O43679 373 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 ABCB7O75027 752 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 SULT1C4O75897 302 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 ZNF682O95780 498 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 PCYT1AP49585 367 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 RPL38P63173 70 aaKnown RBP12.24□□□□□ -0.45
HDAC4-208ENST00000463007 SYT16Q17RD7 645 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 ZRANB3Q5FWF4 1079 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 C6orf136Q5SQH8 315 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 NIPAL1Q6NVV3 410 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 TMEM199Q8N511 208 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 PCSK9Q8NBP7 692 aaKnown RBP12.24□□□□□ -0.45
HDAC4-208ENST00000463007 STAG3L4Q8TBR4 150 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 EEF1AKMT1Q8WVE0 214 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 NODALQ96S42 347 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 TRIM54Q9BYV2 358 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 IKZF5Q9H5V7 419 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 SIAEQ9HAT2 523 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 RIC8BQ9NVN3 520 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 FAM118AQ9NWS6 357 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 RNF186Q9NXI6 227 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.24□□□□□ -0.45
HDAC4-208ENST00000463007 DRGXA6NNA5 263 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 E5RI56 91 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 MUSKO15146 869 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 MYO1DO94832 1006 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 HTR1AP08908 422 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 ELNP15502 786 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 RHOQP17081 205 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 OR1E1P30953 314 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 ALDH3A2P51648 485 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 RFTN2Q52LD8 501 aaPredicted RBP12.24□□□□□ -0.45
HDAC4-208ENST00000463007 C6orf141Q5SZD1 244 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 KANK2Q63ZY3 851 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 HACD2Q6Y1H2 254 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 HEATR4Q86WZ0 1026 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 PGBD5Q8N414 524 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 L3HYPDHQ96EM0 354 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 HPS4Q9NQG7 708 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 ERVK-18Q9QC07 812 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 XIRP2A4UGR9 3374 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 KPNA4O00629 521 aaPredicted RBP12.23□□□□□ -0.45
HDAC4-208ENST00000463007 SYN3O14994 580 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 SH3BGRLO75368 114 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 ALPLP05186 524 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 MYCLP1P12525 358 aaPredicted RBP12.23□□□□□ -0.45
HDAC4-208ENST00000463007 TRIP4Q15650 581 aaPredicted RBP12.23□□□□□ -0.45
HDAC4-208ENST00000463007 DPY19L1Q2PZI1 675 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 AP5B1Q2VPB7 878 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 FAM174BQ3ZCQ3 159 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 ZNF362Q5T0B9 420 aaPredicted RBP12.23□□□□□ -0.45
HDAC4-208ENST00000463007 RNF19BQ6ZMZ0 732 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 TMEM179BQ7Z7N9 219 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 SLC22A16Q86VW1 577 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 KRTCAP2Q8N6L1 136 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 OR2T12Q8NG77 320 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 ARRDC2Q8TBH0 407 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 TRUB1Q8WWH5 349 aaKnown RBP12.23□□□□□ -0.45
HDAC4-208ENST00000463007 PPP1R14BQ96C90 147 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 DUS3LQ96G46 650 aaKnown RBP12.23□□□□□ -0.45
HDAC4-208ENST00000463007 ALPK1Q96QP1 1244 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 ATOH8Q96SQ7 321 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 LRRC3Q9BY71 257 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 CRISPLD1Q9H336 500 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 ATAD3AQ9NVI7 634 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 GMIPQ9P107 970 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 COL4A6Q14031 1691 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 A0A1W2PQ67 120 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 LRATO95237 230 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 ZDHHC11BP0C7U3 371 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 TIAL1Q01085 375 aaKnown RBP eCLIP12.23□□□□□ -0.45
HDAC4-208ENST00000463007 RAD51Q06609 339 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 MADCAM1Q13477 382 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 BTG3Q14201 252 aaPredicted RBP12.23□□□□□ -0.45
HDAC4-208ENST00000463007 RCAN2Q14206 197 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 VARS2Q5ST30 1063 aaKnown RBP12.23□□□□□ -0.45
HDAC4-208ENST00000463007 GLB1LQ6UWU2 654 aa12.23□□□□□ -0.45
HDAC4-208ENST00000463007 MCOLN3Q8TDD5 553 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms