RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 PTPRQQ9UMZ3 2332 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 CDRT15L2A8MXV6 281 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 BHMG1C9JSJ3 638 aaPredicted RBP11.79□□□□□ -0.52
HPS1-206ENST00000462743 E7ESA3 106 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 IFRD1O00458 451 aaPredicted RBP11.79□□□□□ -0.52
HPS1-206ENST00000462743 PLD2O14939 933 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 RAD51CO43502 376 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 ESR1P03372 595 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 MPOP05164 745 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 ANKRD34CP0C6C1 535 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 AMD1P17707 334 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 PGAM1P18669 254 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 AOAHP28039 575 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 CCR7P32248 378 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 RPL21P46778 160 aaKnown RBP11.79□□□□□ -0.52
HPS1-206ENST00000462743 ITGA8P53708 1063 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 GABREP78334 506 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 CKAP4Q07065 602 aaKnown RBP11.79□□□□□ -0.52
HPS1-206ENST00000462743 THOC5Q13769 683 aaKnown RBP11.79□□□□□ -0.52
HPS1-206ENST00000462743 LONRF1Q17RB8 773 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 WHAMMP3Q1A5X7 153 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 TBC1D25Q3MII6 688 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 MAP9Q49MG5 647 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 SPANXN3Q5MJ09 141 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 KLHL35Q6PF15 583 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 CLEC14AQ86T13 490 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 PDZD3Q86UT5 571 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 SLC22A15Q8IZD6 547 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 FBXO39Q8N4B4 442 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 SNIP1Q8TAD8 396 aaKnown RBP11.79□□□□□ -0.52
HPS1-206ENST00000462743 MDM1Q8TC05 714 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 ZCCHC14Q8WYQ9 949 aaKnown RBP11.79□□□□□ -0.52
HPS1-206ENST00000462743 ELMO1Q92556 727 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 TFGQ92734 400 aaPredicted RBP11.79□□□□□ -0.52
HPS1-206ENST00000462743 FGF11Q92914 225 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 TRIM56Q9BRZ2 755 aaKnown RBP11.79□□□□□ -0.52
HPS1-206ENST00000462743 TFB2MQ9H5Q4 396 aaKnown RBP11.79□□□□□ -0.52
HPS1-206ENST00000462743 KIR3DX1Q9H7L2 352 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 SYNDIG1Q9H7V2 258 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 IMP3Q9NV31 184 aaKnown RBP11.79□□□□□ -0.52
HPS1-206ENST00000462743 KLHL42Q9P2K6 505 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 SLC24A2Q9UI40 661 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 GNPTGQ9UJJ9 305 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 SATB2Q9UPW6 733 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 CDYLQ9Y232 598 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 SNX24Q9Y343 169 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 PCDHGA7Q9Y5G6 932 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 MAD1L1Q9Y6D9 718 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 TEX264Q9Y6I9 313 aa11.79□□□□□ -0.52
HPS1-206ENST00000462743 MN1Q10571 1320 aaPredicted RBP11.79□□□□□ -0.52
HPS1-206ENST00000462743 SPTBP11277 2137 aa11.78□□□□□ -0.52
HPS1-206ENST00000462743 B4E171 279 aa11.78□□□□□ -0.52
HPS1-206ENST00000462743 GOLGA8KD6RF30 607 aa11.78□□□□□ -0.52
HPS1-206ENST00000462743 GOLGA8TH3BQL2 631 aa11.78□□□□□ -0.52
HPS1-206ENST00000462743 EIF3HO15372 352 aaKnown RBP eCLIP11.78□□□□□ -0.52
HPS1-206ENST00000462743 NVLO15381 856 aaKnown RBP11.78□□□□□ -0.52
HPS1-206ENST00000462743 BRINP1O60477 761 aa11.78□□□□□ -0.52
HPS1-206ENST00000462743 URI1O94763 535 aaPredicted RBP11.78□□□□□ -0.52
HPS1-206ENST00000462743 ITGA2BP08514 1039 aa11.78□□□□□ -0.52
HPS1-206ENST00000462743 RBMS1P29558 406 aaKnown RBP11.78□□□□□ -0.52
HPS1-206ENST00000462743 TSPAN7P41732 249 aa11.78□□□□□ -0.52
HPS1-206ENST00000462743 ARL4CP56559 192 aa11.78□□□□□ -0.52
HPS1-206ENST00000462743 BOP1Q14137 746 aaKnown RBP11.78□□□□□ -0.52
HPS1-206ENST00000462743 C16orf72Q14CZ0 275 aa11.78□□□□□ -0.52
HPS1-206ENST00000462743 HIF1AQ16665 826 aa11.78□□□□□ -0.52
HPS1-206ENST00000462743 BBS9Q3SYG4 887 aa11.78□□□□□ -0.52
HPS1-206ENST00000462743 STEAP4Q687X5 459 aa11.78□□□□□ -0.52
HPS1-206ENST00000462743 PTRHD1Q6GMV3 140 aaKnown RBP11.78□□□□□ -0.52
HPS1-206ENST00000462743 GALNT7Q86SF2 657 aa11.78□□□□□ -0.52
HPS1-206ENST00000462743 IGDCC3Q8IVU1 814 aa11.78□□□□□ -0.52
HPS1-206ENST00000462743 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.78□□□□□ -0.52
HPS1-206ENST00000462743 AGBL5Q8NDL9 886 aa11.78□□□□□ -0.52
HPS1-206ENST00000462743 ACVR1CQ8NER5 493 aa11.78□□□□□ -0.52
HPS1-206ENST00000462743 TRIM44Q96DX7 344 aaPredicted RBP11.78□□□□□ -0.52
HPS1-206ENST00000462743 TWSG1Q9GZX9 223 aa11.78□□□□□ -0.52
HPS1-206ENST00000462743 PLAC1Q9HBJ0 212 aa11.78□□□□□ -0.52
HPS1-206ENST00000462743 AKAP7Q9P0M2 348 aaPredicted RBP11.78□□□□□ -0.52
HPS1-206ENST00000462743 TMEM9Q9P0T7 183 aa11.78□□□□□ -0.52
HPS1-206ENST00000462743 ACSL6Q9UKU0 697 aa11.78□□□□□ -0.52
HPS1-206ENST00000462743 ZMIZ1Q9ULJ6 1067 aa11.78□□□□□ -0.52
HPS1-206ENST00000462743 APOA4P06727 396 aa11.77□□□□□ -0.53
HPS1-206ENST00000462743 PKMP14618 531 aaKnown RBP11.77□□□□□ -0.53
HPS1-206ENST00000462743 TYRP1P17643 537 aa11.77□□□□□ -0.53
HPS1-206ENST00000462743 ELK3P41970 407 aa11.77□□□□□ -0.53
HPS1-206ENST00000462743 CAPZBP47756 277 aa11.77□□□□□ -0.53
HPS1-206ENST00000462743 PREPP48147 710 aa11.77□□□□□ -0.53
HPS1-206ENST00000462743 LEPRP48357 1165 aaKnown RBP11.77□□□□□ -0.53
HPS1-206ENST00000462743 CAV1Q03135 178 aa11.77□□□□□ -0.53
HPS1-206ENST00000462743 C2orf54Q08AI8 447 aa11.77□□□□□ -0.53
HPS1-206ENST00000462743 GBX1Q14549 363 aa11.77□□□□□ -0.53
HPS1-206ENST00000462743 CRYMQ14894 314 aa11.77□□□□□ -0.53
HPS1-206ENST00000462743 HSP90AA5PQ58FG0 334 aa11.77□□□□□ -0.53
HPS1-206ENST00000462743 C3orf38Q5JPI3 329 aa11.77□□□□□ -0.53
HPS1-206ENST00000462743 CTSL3PQ5NE16 218 aa11.77□□□□□ -0.53
HPS1-206ENST00000462743 PLEKHS1Q5SXH7 462 aa11.77□□□□□ -0.53
HPS1-206ENST00000462743 PHF19Q5T6S3 580 aa11.77□□□□□ -0.53
HPS1-206ENST00000462743 KIAA0408Q6ZU52 694 aa11.77□□□□□ -0.53
HPS1-206ENST00000462743 CNTN4Q8IWV2 1026 aa11.77□□□□□ -0.53
HPS1-206ENST00000462743 TBC1D21Q8IYX1 336 aa11.77□□□□□ -0.53
HPS1-206ENST00000462743 CARFQ8N187 725 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms