RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 C10orf88Q9H8K7 445 aa17.41■□□□□ 0.38
SSB-206ENST00000461708 KCND1Q9NSA2 647 aa17.41■□□□□ 0.38
SSB-206ENST00000461708 MAN2B2Q9Y2E5 1009 aa17.41■□□□□ 0.38
SSB-206ENST00000461708 CFAP20Q9Y6A4 193 aaKnown RBP17.41■□□□□ 0.38
SSB-206ENST00000461708 PIKFYVEQ9Y2I7 2098 aa17.41■□□□□ 0.38
SSB-206ENST00000461708 IGLV3-16A0A075B6K0 115 aa17.4■□□□□ 0.38
SSB-206ENST00000461708 OR6C74A6NCV1 312 aa17.4■□□□□ 0.38
SSB-206ENST00000461708 BTNL10A8MVZ5 291 aa17.4■□□□□ 0.38
SSB-206ENST00000461708 TJP3O95049 919 aa17.4■□□□□ 0.38
SSB-206ENST00000461708 ITGALP20701 1170 aa17.4■□□□□ 0.38
SSB-206ENST00000461708 CTNNA2P26232 953 aa17.4■□□□□ 0.38
SSB-206ENST00000461708 CETN2P41208 172 aa17.4■□□□□ 0.38
SSB-206ENST00000461708 RPS15P62841 145 aaKnown RBP17.4■□□□□ 0.38
SSB-206ENST00000461708 SEMA5AQ13591 1074 aa17.4■□□□□ 0.38
SSB-206ENST00000461708 DENND5AQ6IQ26 1287 aa17.4■□□□□ 0.38
SSB-206ENST00000461708 CERS6Q6ZMG9 384 aa17.4■□□□□ 0.38
SSB-206ENST00000461708 CFAP206Q8IYR0 622 aa17.4■□□□□ 0.38
SSB-206ENST00000461708 ACVR1CQ8NER5 493 aa17.4■□□□□ 0.38
SSB-206ENST00000461708 C1GALT1Q9NS00 363 aa17.4■□□□□ 0.38
SSB-206ENST00000461708 CRLS1Q9UJA2 301 aa17.4■□□□□ 0.38
SSB-206ENST00000461708 TLK1Q9UKI8 766 aa17.4■□□□□ 0.38
SSB-206ENST00000461708 POMT2Q9UKY4 750 aa17.4■□□□□ 0.38
SSB-206ENST00000461708 TFR2Q9UP52 801 aa17.4■□□□□ 0.38
SSB-206ENST00000461708 EPN1Q9Y6I3 576 aaPredicted RBP17.4■□□□□ 0.38
SSB-206ENST00000461708 MED13Q9UHV7 2174 aa17.39■□□□□ 0.37
SSB-206ENST00000461708 KCNN4O15554 427 aa17.39■□□□□ 0.37
SSB-206ENST00000461708 LDB2O43679 373 aa17.39■□□□□ 0.37
SSB-206ENST00000461708 SCRG1O75711 98 aa17.39■□□□□ 0.37
SSB-206ENST00000461708 NTRK1P04629 796 aa17.39■□□□□ 0.37
SSB-206ENST00000461708 GSTM1P09488 218 aa17.39■□□□□ 0.37
SSB-206ENST00000461708 ATP1B2P14415 290 aaPredicted RBP17.39■□□□□ 0.37
SSB-206ENST00000461708 CD151P48509 253 aa17.39■□□□□ 0.37
SSB-206ENST00000461708 CD97P48960 835 aa17.39■□□□□ 0.37
SSB-206ENST00000461708 KPNA2P52292 529 aaKnown RBP17.39■□□□□ 0.37
SSB-206ENST00000461708 RWDD2BP57060 319 aa17.39■□□□□ 0.37
SSB-206ENST00000461708 GSDMDP57764 484 aa17.39■□□□□ 0.37
SSB-206ENST00000461708 GSTM4Q03013 218 aa17.39■□□□□ 0.37
SSB-206ENST00000461708 PRKAA1Q13131 559 aa17.39■□□□□ 0.37
SSB-206ENST00000461708 RPA4Q13156 261 aa17.39■□□□□ 0.37
SSB-206ENST00000461708 UBAP2LQ14157 1087 aaKnown RBP17.39■□□□□ 0.37
SSB-206ENST00000461708 ZNF658BQ4V348 819 aaPredicted RBP17.39■□□□□ 0.37
SSB-206ENST00000461708 IZUMO3Q5VZ72 239 aa17.39■□□□□ 0.37
SSB-206ENST00000461708 DUS1LQ6P1R4 473 aaKnown RBP17.39■□□□□ 0.37
SSB-206ENST00000461708 DARS2Q6PI48 645 aaKnown RBP17.39■□□□□ 0.37
SSB-206ENST00000461708 ASB18Q6ZVZ8 466 aa17.39■□□□□ 0.37
SSB-206ENST00000461708 TMTC1Q8IUR5 882 aa17.39■□□□□ 0.37
SSB-206ENST00000461708 TEX19Q8NA77 164 aa17.39■□□□□ 0.37
SSB-206ENST00000461708 OR13C4Q8NGS5 318 aa17.39■□□□□ 0.37
SSB-206ENST00000461708 RNF31Q96EP0 1072 aa17.39■□□□□ 0.37
SSB-206ENST00000461708 TBL1YQ9BQ87 522 aa17.39■□□□□ 0.37
SSB-206ENST00000461708 APOL2Q9BQE5 337 aa17.39■□□□□ 0.37
SSB-206ENST00000461708 VPS37BQ9H9H4 285 aa17.39■□□□□ 0.37
SSB-206ENST00000461708 TRBV5-4A0A0C4DH59 114 aa17.38■□□□□ 0.37
SSB-206ENST00000461708 H7C0S8 307 aa17.38■□□□□ 0.37
SSB-206ENST00000461708 IPO7O95373 1038 aaKnown RBP17.38■□□□□ 0.37
SSB-206ENST00000461708 POLBP06746 335 aa17.38■□□□□ 0.37
SSB-206ENST00000461708 KLK3P07288 261 aaPredicted RBP17.38■□□□□ 0.37
SSB-206ENST00000461708 SRSF1Q07955 248 aaKnown RBP eCLIP17.38■□□□□ 0.37
SSB-206ENST00000461708 OLIG2Q13516 323 aa17.38■□□□□ 0.37
SSB-206ENST00000461708 KRT33BQ14525 404 aa17.38■□□□□ 0.37
SSB-206ENST00000461708 GSE1Q14687 1217 aa17.38■□□□□ 0.37
SSB-206ENST00000461708 IGFBP7Q16270 282 aa17.38■□□□□ 0.37
SSB-206ENST00000461708 TMEM135Q86UB9 458 aa17.38■□□□□ 0.37
SSB-206ENST00000461708 TMEM126BQ8IUX1 230 aa17.38■□□□□ 0.37
SSB-206ENST00000461708 OR4E2Q8NGC2 313 aa17.38■□□□□ 0.37
SSB-206ENST00000461708 CCDC110Q8TBZ0 833 aa17.38■□□□□ 0.37
SSB-206ENST00000461708 CPT1BQ92523 772 aa17.38■□□□□ 0.37
SSB-206ENST00000461708 MIB2Q96AX9 1013 aa17.38■□□□□ 0.37
SSB-206ENST00000461708 PITPNM3Q9BZ71 974 aa17.38■□□□□ 0.37
SSB-206ENST00000461708 TFB2MQ9H5Q4 396 aaKnown RBP17.38■□□□□ 0.37
SSB-206ENST00000461708 AKIRIN1Q9H9L7 192 aaPredicted RBP17.38■□□□□ 0.37
SSB-206ENST00000461708 FANCEQ9HB96 536 aa17.38■□□□□ 0.37
SSB-206ENST00000461708 ZDHHC3Q9NYG2 299 aa17.38■□□□□ 0.37
SSB-206ENST00000461708 FARSAQ9Y285 508 aaKnown RBP17.38■□□□□ 0.37
SSB-206ENST00000461708 MACROD2A1Z1Q3 448 aa17.37■□□□□ 0.37
SSB-206ENST00000461708 RCCD1A6NED2 376 aa17.37■□□□□ 0.37
SSB-206ENST00000461708 K7EM74 188 aa17.37■□□□□ 0.37
SSB-206ENST00000461708 RAB40ALP0C0E4 278 aa17.37■□□□□ 0.37
SSB-206ENST00000461708 GPS2Q13227 327 aa17.37■□□□□ 0.37
SSB-206ENST00000461708 GPR19Q15760 415 aa17.37■□□□□ 0.37
SSB-206ENST00000461708 PARP6Q2NL67 630 aa17.37■□□□□ 0.37
SSB-206ENST00000461708 KCTD11Q693B1 232 aa17.37■□□□□ 0.37
SSB-206ENST00000461708 FAM199XQ6PEV8 388 aaPredicted RBP17.37■□□□□ 0.37
SSB-206ENST00000461708 LILRA3Q8N6C8 439 aaPredicted RBP17.37■□□□□ 0.37
SSB-206ENST00000461708 LRRC57Q8N9N7 239 aa17.37■□□□□ 0.37
SSB-206ENST00000461708 TTC13Q8NBP0 860 aa17.37■□□□□ 0.37
SSB-206ENST00000461708 SLC38A9Q8NBW4 561 aa17.37■□□□□ 0.37
SSB-206ENST00000461708 LCN9Q8WX39 176 aa17.37■□□□□ 0.37
SSB-206ENST00000461708 ALG3Q92685 438 aa17.37■□□□□ 0.37
SSB-206ENST00000461708 MR1Q95460 341 aa17.37■□□□□ 0.37
SSB-206ENST00000461708 OR52A5Q9H2C5 316 aa17.37■□□□□ 0.37
SSB-206ENST00000461708 SRMSQ9H3Y6 488 aa17.37■□□□□ 0.37
SSB-206ENST00000461708 MVB12BQ9H7P6 319 aa17.37■□□□□ 0.37
SSB-206ENST00000461708 COG4Q9H9E3 785 aa17.37■□□□□ 0.37
SSB-206ENST00000461708 MLXIPLQ9NP71 852 aa17.37■□□□□ 0.37
SSB-206ENST00000461708 SOHLH2Q9NX45 425 aa17.37■□□□□ 0.37
SSB-206ENST00000461708 PCDHGA9Q9Y5G4 932 aaKnown RBP17.37■□□□□ 0.37
SSB-206ENST00000461708 UTP20O75691 2785 aaKnown RBP17.36■□□□□ 0.37
SSB-206ENST00000461708 SLC9B1P1A6NJY1 282 aa17.36■□□□□ 0.37
SSB-206ENST00000461708 CYSRT1A8MQ03 144 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms