RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 LRRC8BQ6P9F7 803 aa15.03■□□□□ -0
VARS-219ENST00000461328 KLHL35Q6PF15 583 aa15.03■□□□□ -0
VARS-219ENST00000461328 PACS1Q6VY07 963 aa15.03■□□□□ -0
VARS-219ENST00000461328 CERS6Q6ZMG9 384 aa15.03■□□□□ -0
VARS-219ENST00000461328 LILRA3Q8N6C8 439 aaPredicted RBP15.03■□□□□ -0
VARS-219ENST00000461328 IL22RA1Q8N6P7 574 aa15.03■□□□□ -0
VARS-219ENST00000461328 ZSCAN1Q8NBB4 408 aa15.03■□□□□ -0
VARS-219ENST00000461328 SPDYE1Q8NFV5 336 aaPredicted RBP15.03■□□□□ -0
VARS-219ENST00000461328 OR4L1Q8NH43 312 aa15.03■□□□□ -0
VARS-219ENST00000461328 RSC1A1Q92681 617 aa15.03■□□□□ -0
VARS-219ENST00000461328 PEX13Q92968 403 aa15.03■□□□□ -0
VARS-219ENST00000461328 CHRAC1Q9NRG0 131 aa15.03■□□□□ -0
VARS-219ENST00000461328 CATSPERZQ9NTU4 200 aa15.03■□□□□ -0
VARS-219ENST00000461328 SYBUQ9NX95 663 aa15.03■□□□□ -0
VARS-219ENST00000461328 MGAQ8IWI9 3026 aa15.03■□□□□ -0
VARS-219ENST00000461328 C17orf113A0A1B0GUU1 675 aa15.02■□□□□ -0
VARS-219ENST00000461328 TCRBV7S3A2A0A539 114 aa15.02■□□□□ -0
VARS-219ENST00000461328 GSTM1P09488 218 aa15.02■□□□□ -0
VARS-219ENST00000461328 ANKRD34CP0C6C1 535 aa15.02■□□□□ -0
VARS-219ENST00000461328 OR56A5P0C7T3 313 aa15.02■□□□□ -0
VARS-219ENST00000461328 PREPP48147 710 aa15.02■□□□□ -0
VARS-219ENST00000461328 LEPRP48357 1165 aaKnown RBP15.02■□□□□ -0
VARS-219ENST00000461328 GSTM4Q03013 218 aa15.02■□□□□ -0
VARS-219ENST00000461328 ACVR1Q04771 509 aa15.02■□□□□ -0
VARS-219ENST00000461328 KCNJ11Q14654 390 aa15.02■□□□□ -0
VARS-219ENST00000461328 PCSK4Q6UW60 755 aa15.02■□□□□ -0
VARS-219ENST00000461328 CEACAM20Q6UY09 585 aa15.02■□□□□ -0
VARS-219ENST00000461328 ELMO1Q92556 727 aa15.02■□□□□ -0
VARS-219ENST00000461328 TTC9Q92623 222 aa15.02■□□□□ -0
VARS-219ENST00000461328 NKD1Q969G9 470 aa15.02■□□□□ -0
VARS-219ENST00000461328 ZDHHC12Q96GR4 267 aa15.02■□□□□ -0
VARS-219ENST00000461328 CAPZA3Q96KX2 299 aa15.02■□□□□ -0
VARS-219ENST00000461328 INSM2Q96T92 566 aaPredicted RBP15.02■□□□□ -0
VARS-219ENST00000461328 NAPGQ99747 312 aaPredicted RBP15.02■□□□□ -0
VARS-219ENST00000461328 FBXO8Q9NRD0 319 aa15.02■□□□□ -0
VARS-219ENST00000461328 SAMD15Q9P1V8 674 aa15.02■□□□□ -0
VARS-219ENST00000461328 HEBP2Q9Y5Z4 205 aa15.02■□□□□ -0
VARS-219ENST00000461328 COLEC10Q9Y6Z7 277 aa15.02■□□□□ -0
VARS-219ENST00000461328 AHCTF1Q8WYP5 2266 aa15.02□□□□□ -0.01
VARS-219ENST00000461328 GOLGA8MH3BSY2 632 aa15.01□□□□□ -0.01
VARS-219ENST00000461328 POLR1CO15160 346 aaPredicted RBP15.01□□□□□ -0.01
VARS-219ENST00000461328 TOX3O15405 576 aaPredicted RBP15.01□□□□□ -0.01
VARS-219ENST00000461328 OR1I1O60431 355 aa15.01□□□□□ -0.01
VARS-219ENST00000461328 RAD1O60671 282 aa15.01□□□□□ -0.01
VARS-219ENST00000461328 NDUFS1P28331 727 aa15.01□□□□□ -0.01
VARS-219ENST00000461328 NMBRP28336 390 aa15.01□□□□□ -0.01
VARS-219ENST00000461328 SEPHS1P49903 392 aa15.01□□□□□ -0.01
VARS-219ENST00000461328 FOXM1Q08050 763 aa15.01□□□□□ -0.01
VARS-219ENST00000461328 C19orf57Q0VDD7 668 aa15.01□□□□□ -0.01
VARS-219ENST00000461328 BOP1Q14137 746 aaKnown RBP15.01□□□□□ -0.01
VARS-219ENST00000461328 BRD3Q15059 726 aa15.01□□□□□ -0.01
VARS-219ENST00000461328 ANKRD22Q5VYY1 191 aa15.01□□□□□ -0.01
VARS-219ENST00000461328 ARMC6Q6NXE6 501 aa15.01□□□□□ -0.01
VARS-219ENST00000461328 FAM92BQ6ZTR7 304 aa15.01□□□□□ -0.01
VARS-219ENST00000461328 ZNF534Q76KX8 674 aa15.01□□□□□ -0.01
VARS-219ENST00000461328 CACNA2D3Q8IZS8 1091 aa15.01□□□□□ -0.01
VARS-219ENST00000461328 WBP1Q96G27 269 aa15.01□□□□□ -0.01
VARS-219ENST00000461328 ZPBPQ9BS86 351 aa15.01□□□□□ -0.01
VARS-219ENST00000461328 TSSK1BQ9BXA7 367 aa15.01□□□□□ -0.01
VARS-219ENST00000461328 ZNF768Q9H5H4 540 aaKnown RBP15.01□□□□□ -0.01
VARS-219ENST00000461328 APMAPQ9HDC9 416 aa15.01□□□□□ -0.01
VARS-219ENST00000461328 SIDT1Q9NXL6 827 aaKnown RBP15.01□□□□□ -0.01
VARS-219ENST00000461328 ASIC3Q9UHC3 531 aa15.01□□□□□ -0.01
VARS-219ENST00000461328 PCDHGA4Q9Y5G9 962 aa15.01□□□□□ -0.01
VARS-219ENST00000461328 PRSS21Q9Y6M0 314 aa15.01□□□□□ -0.01
VARS-219ENST00000461328 SDK2Q58EX2 2172 aa15□□□□□ -0.01
VARS-219ENST00000461328 CTAGE9A4FU28 777 aa15□□□□□ -0.01
VARS-219ENST00000461328 LIN7AO14910 233 aaPredicted RBP15□□□□□ -0.01
VARS-219ENST00000461328 CD3EAPO15446 510 aaKnown RBP15□□□□□ -0.01
VARS-219ENST00000461328 TMEM63AO94886 807 aa15□□□□□ -0.01
VARS-219ENST00000461328 ITGB6P18564 788 aa15□□□□□ -0.01
VARS-219ENST00000461328 PAMP19021 973 aa15□□□□□ -0.01
VARS-219ENST00000461328 TTPAP49638 278 aa15□□□□□ -0.01
VARS-219ENST00000461328 RPA4Q13156 261 aa15□□□□□ -0.01
VARS-219ENST00000461328 CACHD1Q5VU97 1274 aa15□□□□□ -0.01
VARS-219ENST00000461328 CES3Q6UWW8 571 aa15□□□□□ -0.01
VARS-219ENST00000461328 PRSS42Q7Z5A4 293 aa15□□□□□ -0.01
VARS-219ENST00000461328 LDB1Q86U70 411 aaPredicted RBP15□□□□□ -0.01
VARS-219ENST00000461328 OOSP2Q86WS3 158 aa15□□□□□ -0.01
VARS-219ENST00000461328 CPT1BQ92523 772 aa15□□□□□ -0.01
VARS-219ENST00000461328 FERD3LQ96RJ6 166 aa15□□□□□ -0.01
VARS-219ENST00000461328 DDX47Q9H0S4 455 aaKnown RBP15□□□□□ -0.01
VARS-219ENST00000461328 KIR3DX1Q9H7L2 352 aa15□□□□□ -0.01
VARS-219ENST00000461328 MRM3Q9HC36 420 aaKnown RBP15□□□□□ -0.01
VARS-219ENST00000461328 XAB2Q9HCS7 855 aaKnown RBP15□□□□□ -0.01
VARS-219ENST00000461328 TREX1Q9NSU2 369 aa15□□□□□ -0.01
VARS-219ENST00000461328 EPHA6Q9UF33 1036 aa15□□□□□ -0.01
VARS-219ENST00000461328 SOX13Q9UN79 622 aa15□□□□□ -0.01
VARS-219ENST00000461328 ATRXP46100 2492 aa14.99□□□□□ -0.01
VARS-219ENST00000461328 KIF1CO43896 1103 aaKnown RBP14.99□□□□□ -0.01
VARS-219ENST00000461328 AVILO75366 819 aa14.99□□□□□ -0.01
VARS-219ENST00000461328 NDUFS3O75489 264 aa14.99□□□□□ -0.01
VARS-219ENST00000461328 STK17BO94768 372 aa14.99□□□□□ -0.01
VARS-219ENST00000461328 LIFP15018 202 aa14.99□□□□□ -0.01
VARS-219ENST00000461328 WT1P19544 449 aaPredicted RBP14.99□□□□□ -0.01
VARS-219ENST00000461328 MAGEA6P43360 314 aa14.99□□□□□ -0.01
VARS-219ENST00000461328 CSE1LP55060 971 aaKnown RBP14.99□□□□□ -0.01
VARS-219ENST00000461328 SH3BP2P78314 561 aa14.99□□□□□ -0.01
VARS-219ENST00000461328 SEMA3AQ14563 771 aa14.99□□□□□ -0.01
VARS-219ENST00000461328 PTRHD1Q6GMV3 140 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms