RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 OR6C1Q96RD1 312 aa2.89□□□□□ -1.95
HPS3-203ENST00000460822 PARK7Q99497 189 aaKnown RBP2.89□□□□□ -1.95
HPS3-203ENST00000460822 KXD1Q9BQD3 176 aa2.89□□□□□ -1.95
HPS3-203ENST00000460822 TMEM79Q9BSE2 394 aa2.89□□□□□ -1.95
HPS3-203ENST00000460822 C16orf70Q9BSU1 422 aa2.89□□□□□ -1.95
HPS3-203ENST00000460822 SPXQ9BT56 116 aa2.89□□□□□ -1.95
HPS3-203ENST00000460822 SPRY4Q9C004 299 aa2.89□□□□□ -1.95
HPS3-203ENST00000460822 SLC5A7Q9GZV3 580 aa2.89□□□□□ -1.95
HPS3-203ENST00000460822 TMEM206Q9H813 350 aa2.89□□□□□ -1.95
HPS3-203ENST00000460822 TUFT1Q9NNX1 390 aa2.89□□□□□ -1.95
HPS3-203ENST00000460822 IARS2Q9NSE4 1012 aaKnown RBP2.89□□□□□ -1.95
HPS3-203ENST00000460822 ERAP1Q9NZ08 941 aa2.89□□□□□ -1.95
HPS3-203ENST00000460822 RHCGQ9UBD6 479 aa2.89□□□□□ -1.95
HPS3-203ENST00000460822 POLLQ9UGP5 575 aa2.89□□□□□ -1.95
HPS3-203ENST00000460822 ITGA11Q9UKX5 1188 aa2.89□□□□□ -1.95
HPS3-203ENST00000460822 TMEM184BQ9Y519 407 aaPredicted RBP2.89□□□□□ -1.95
HPS3-203ENST00000460822 NCAPD3P42695 1498 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 HEPACAM2A8MVW5 462 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 FAM90A26D6RGX4 464 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 I6L893 689 aaPredicted RBP2.88□□□□□ -1.95
HPS3-203ENST00000460822 WNT9BO14905 357 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 ANKRD28O15084 1053 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 KCNN4O15554 427 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 HSPA12AO43301 675 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 TXNL1O43396 289 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 XRCC3O43542 346 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 ITM2AO43736 263 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 TSPAN1O60635 241 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 VNN2O95498 520 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 ACSL3O95573 720 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 INHBAP08476 426 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 RAB40ALP0C0E4 278 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 EEF2P13639 858 aaKnown RBP2.88□□□□□ -1.95
HPS3-203ENST00000460822 GNAZP19086 355 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 GNLYP22749 145 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 ADARP55265 1226 aaKnown RBP2.88□□□□□ -1.95
HPS3-203ENST00000460822 STARD6P59095 220 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 PTENP60484 403 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 SSBP2P81877 361 aaPredicted RBP2.88□□□□□ -1.95
HPS3-203ENST00000460822 CTTNQ14247 550 aaKnown RBP2.88□□□□□ -1.95
HPS3-203ENST00000460822 Q5PR19 223 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 C11orf87Q6NUJ2 197 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 KCTD18Q6PI47 426 aaPredicted RBP2.88□□□□□ -1.95
HPS3-203ENST00000460822 TMEM270Q6UE05 265 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 ABRAXAS1Q6UWZ7 409 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 DLK2Q6UY11 383 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 DEF8Q6ZN54 512 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 ATG9AQ7Z3C6 839 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 ZC3HC1Q86WB0 502 aaKnown RBP2.88□□□□□ -1.95
HPS3-203ENST00000460822 SFRP1Q8N474 314 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 SLC38A9Q8NBW4 561 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 ACVR1CQ8NER5 493 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 DBF4BQ8NFT6 615 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 OR7G3Q8NG95 312 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 BBS10Q8TAM1 723 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 HEXDCQ8WVB3 486 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 SLAMF9Q96A28 289 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 MIB2Q96AX9 1013 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 OTUB1Q96FW1 271 aaPredicted RBP2.88□□□□□ -1.95
HPS3-203ENST00000460822 NLRP4Q96MN2 994 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 SEPHS2Q99611 448 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 MOV10L1Q9BXT6 1211 aaKnown RBP2.88□□□□□ -1.95
HPS3-203ENST00000460822 C1orf21Q9H246 121 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 INTS10Q9NVR2 710 aaKnown RBP2.88□□□□□ -1.95
HPS3-203ENST00000460822 OSER1Q9NX31 292 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 DPP3Q9NY33 737 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 LEF1Q9UJU2 399 aaPredicted RBP2.88□□□□□ -1.95
HPS3-203ENST00000460822 FBXL2Q9UKC9 423 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 PADI3Q9ULW8 664 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 PCDHA12Q9UN75 941 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 SNX7Q9UNH6 387 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 PAM16Q9Y3D7 125 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 PCDHGA1Q9Y5H4 931 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 KDM5BQ9UGL1 1544 aa2.88□□□□□ -1.95
HPS3-203ENST00000460822 ASTN2O75129 1339 aaPredicted RBP2.88□□□□□ -1.95
HPS3-203ENST00000460822 NCOA2Q15596 1464 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 LRRC9Q6ZRR7 1453 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 SMIM35A0A1B0GVV1 85 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 GAGE12JA6NER3 117 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 TRIM64CA6NLI5 447 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 ZNF814B7Z6K7 855 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 CLDN4O14493 209 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 PTGESO14684 152 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 HS3ST1O14792 307 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 TLR2O60603 784 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 NDUFS7O75251 213 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 MED24O75448 989 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 BCAS2O75934 225 aaPredicted RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 DDNO94850 711 aaPredicted RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 MOCS3O95396 460 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 IGKV2-30P06310 120 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 DANCRP0C864 163 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 UGT1A1P22309 533 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 LIMK1P53667 647 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 HNRNPH2P55795 449 aaKnown RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 TAS2R38P59533 333 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 ST8SIA6P61647 398 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 NPRL3Q12980 569 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 KLF9Q13886 244 aaPredicted RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 HNF4GQ14541 408 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms