RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 ZSCAN26Q16670 478 aa16.49■□□□□ 0.23
NELFCD-201ENST00000460601 VWA5B1Q5TIE3 1220 aa16.49■□□□□ 0.23
NELFCD-201ENST00000460601 FRMD7Q6ZUT3 714 aa16.49■□□□□ 0.23
NELFCD-201ENST00000460601 MAVSQ7Z434 540 aa16.49■□□□□ 0.23
NELFCD-201ENST00000460601 CCDC197Q8NCU1 140 aa16.49■□□□□ 0.23
NELFCD-201ENST00000460601 PIWIL2Q8TC59 973 aaKnown RBP16.49■□□□□ 0.23
NELFCD-201ENST00000460601 PPP4R1Q8TF05 950 aa16.49■□□□□ 0.23
NELFCD-201ENST00000460601 ASB11Q8WXH4 323 aa16.49■□□□□ 0.23
NELFCD-201ENST00000460601 BIRC7Q96CA5 298 aa16.49■□□□□ 0.23
NELFCD-201ENST00000460601 L3HYPDHQ96EM0 354 aa16.49■□□□□ 0.23
NELFCD-201ENST00000460601 BMFQ96LC9 184 aa16.49■□□□□ 0.23
NELFCD-201ENST00000460601 NELL2Q99435 816 aa16.49■□□□□ 0.23
NELFCD-201ENST00000460601 APOOQ9BUR5 198 aa16.49■□□□□ 0.23
NELFCD-201ENST00000460601 C1QTNF7Q9BXJ2 289 aa16.49■□□□□ 0.23
NELFCD-201ENST00000460601 TRIM55Q9BYV6 548 aa16.49■□□□□ 0.23
NELFCD-201ENST00000460601 CHRDQ9H2X0 955 aa16.49■□□□□ 0.23
NELFCD-201ENST00000460601 KLHL42Q9P2K6 505 aa16.49■□□□□ 0.23
NELFCD-201ENST00000460601 MOSPD1Q9UJG1 213 aa16.49■□□□□ 0.23
NELFCD-201ENST00000460601 PDE10AQ9Y233 779 aa16.49■□□□□ 0.23
NELFCD-201ENST00000460601 SIT1Q9Y3P8 196 aa16.49■□□□□ 0.23
NELFCD-201ENST00000460601 TMEM114B3SHH9 223 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 PI15O43692 258 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 KLK8O60259 260 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 SNX2O60749 519 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 IGLV3-19P01714 112 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 ENO3P13929 434 aaPredicted RBP16.48■□□□□ 0.23
NELFCD-201ENST00000460601 GDF5P43026 501 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 UBE2R2Q712K3 238 aaPredicted RBP16.48■□□□□ 0.23
NELFCD-201ENST00000460601 CHST15Q7LFX5 561 aaPredicted RBP16.48■□□□□ 0.23
NELFCD-201ENST00000460601 CLDN23Q96B33 292 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 PPP1R36Q96LQ0 422 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 EBF4Q9BQW3 602 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 COG4Q9H9E3 785 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 PHPT1Q9NRX4 125 aaPredicted RBP16.48■□□□□ 0.23
NELFCD-201ENST00000460601 WSB2Q9NYS7 404 aaPredicted RBP16.48■□□□□ 0.23
NELFCD-201ENST00000460601 KLHL14Q9P2G3 628 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 EIF2B4Q9UI10 523 aaKnown RBP16.48■□□□□ 0.23
NELFCD-201ENST00000460601 PNMA8BQ9ULN7 279 aaPredicted RBP16.48■□□□□ 0.23
NELFCD-201ENST00000460601 GPR34Q9UPC5 381 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 FIS1Q9Y3D6 152 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 OARD1Q9Y530 152 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 KPNA5O15131 536 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 H2AFYO75367 372 aaKnown RBP16.48■□□□□ 0.23
NELFCD-201ENST00000460601 CEACAM5P06731 702 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 TROVE2P10155 538 aaKnown RBP eCLIP16.48■□□□□ 0.23
NELFCD-201ENST00000460601 HNRNPA2B1P22626 353 aaKnown RBP16.48■□□□□ 0.23
NELFCD-201ENST00000460601 SFSWAPQ12872 951 aaKnown RBP16.48■□□□□ 0.23
NELFCD-201ENST00000460601 ZXDCQ2QGD7 858 aaPredicted RBP16.48■□□□□ 0.23
NELFCD-201ENST00000460601 CCSMST1Q4G0I0 132 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 DCBLD1Q8N8Z6 715 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 GRAMD1AQ96CP6 724 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 EGFL8Q99944 293 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 ZBTB26Q9HCK0 441 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 FGF22Q9HCT0 170 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 SEMA4BQ9NPR2 832 aaPredicted RBP16.48■□□□□ 0.23
NELFCD-201ENST00000460601 PSMD13Q9UNM6 376 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 PLEKHM1Q9Y4G2 1056 aa16.48■□□□□ 0.23
NELFCD-201ENST00000460601 IGHV1OR15-9A0A0B4J2B8 117 aa16.47■□□□□ 0.23
NELFCD-201ENST00000460601 CCDC189A1A4V9 331 aa16.47■□□□□ 0.23
NELFCD-201ENST00000460601 TAPBPO15533 448 aa16.47■□□□□ 0.23
NELFCD-201ENST00000460601 GRID2O43424 1007 aa16.47■□□□□ 0.23
NELFCD-201ENST00000460601 TGDSO95455 350 aa16.47■□□□□ 0.23
NELFCD-201ENST00000460601 JUNP05412 331 aaKnown RBP16.47■□□□□ 0.23
NELFCD-201ENST00000460601 RPL10P27635 214 aaKnown RBP16.47■□□□□ 0.23
NELFCD-201ENST00000460601 CD6P30203 668 aa16.47■□□□□ 0.23
NELFCD-201ENST00000460601 RPIAP49247 311 aa16.47■□□□□ 0.23
NELFCD-201ENST00000460601 ALDH18A1P54886 795 aaKnown RBP16.47■□□□□ 0.23
NELFCD-201ENST00000460601 AQP5P55064 265 aa16.47■□□□□ 0.23
NELFCD-201ENST00000460601 ARHGAP8P85298 464 aa16.47■□□□□ 0.23
NELFCD-201ENST00000460601 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.47■□□□□ 0.23
NELFCD-201ENST00000460601 GCNT7Q6ZNI0 430 aa16.47■□□□□ 0.23
NELFCD-201ENST00000460601 LRRTM4Q86VH4 590 aa16.47■□□□□ 0.23
NELFCD-201ENST00000460601 SLC22A15Q8IZD6 547 aa16.47■□□□□ 0.23
NELFCD-201ENST00000460601 SPEM1Q8N4L4 309 aa16.47■□□□□ 0.23
NELFCD-201ENST00000460601 OR2L2Q8NH16 312 aa16.47■□□□□ 0.23
NELFCD-201ENST00000460601 TRPC4APQ8TEL6 797 aa16.47■□□□□ 0.23
NELFCD-201ENST00000460601 PDXPQ96GD0 296 aa16.47■□□□□ 0.23
NELFCD-201ENST00000460601 ZNF514Q96K75 400 aaPredicted RBP16.47■□□□□ 0.23
NELFCD-201ENST00000460601 LINC00615Q96LM1 132 aaPredicted RBP16.47■□□□□ 0.23
NELFCD-201ENST00000460601 TMEM120AQ9BXJ8 343 aa16.47■□□□□ 0.23
NELFCD-201ENST00000460601 SUFUQ9UMX1 484 aa16.47■□□□□ 0.23
NELFCD-201ENST00000460601 ST14Q9Y5Y6 855 aa16.47■□□□□ 0.23
NELFCD-201ENST00000460601 C10orf142B7Z368 130 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 H3BM21 787 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 GFYI3L273 518 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 NPHS1O60500 1241 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 MATN4O95460 622 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 ACP5P13686 325 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 VCLP18206 1134 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 PRDX3P30048 256 aaKnown RBP16.46■□□□□ 0.23
NELFCD-201ENST00000460601 BDKRB1P46663 353 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 HSPA7P48741 367 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 SETDB1Q15047 1291 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 SH2D4BQ5SQS7 431 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 MAPK15Q8TD08 544 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 SNX19Q92543 992 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 GLMNQ92990 594 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 CNDP1Q96KN2 507 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 TMEM79Q9BSE2 394 aa16.46■□□□□ 0.23
NELFCD-201ENST00000460601 ARL15Q9NXU5 204 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms