RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 GPR89BP0CG08 455 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 HNRNPCL4P0DMR1 293 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 T-ENOLP0DO92 83 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 MYBL1P10243 752 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 SRCP12931 536 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 ANXA7P20073 488 aaKnown RBP3.3□□□□□ -1.88
VPS8-215ENST00000460158 UBA1P22314 1058 aaKnown RBP3.3□□□□□ -1.88
VPS8-215ENST00000460158 HOXC9P31274 260 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 HNMTP50135 292 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 YBEYP58557 167 aaPredicted RBP3.3□□□□□ -1.88
VPS8-215ENST00000460158 SEC61BP60468 96 aaKnown RBP3.3□□□□□ -1.88
VPS8-215ENST00000460158 SEC61A1P61619 476 aaKnown RBP3.3□□□□□ -1.88
VPS8-215ENST00000460158 TUBA1BP68363 451 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 ZXDBP98169 803 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 CETN1Q12798 172 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 KIF5AQ12840 1032 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 IKQ13123 557 aaPredicted RBP3.3□□□□□ -1.88
VPS8-215ENST00000460158 RCN2Q14257 317 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 CALCRLQ16602 461 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 RABL6Q3YEC7 729 aaPredicted RBP3.3□□□□□ -1.88
VPS8-215ENST00000460158 BOLA3Q53S33 107 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 PLEKHS1Q5SXH7 462 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 ERMARDQ5T6L9 678 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 TMEM198Q66K66 360 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 PMS2CLQ68D20 193 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 RGMBQ6NW40 437 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 CTR9Q6PD62 1173 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 ZNF517Q6ZMY9 492 aaPredicted RBP3.3□□□□□ -1.88
VPS8-215ENST00000460158 CFAP77Q6ZQR2 320 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 CREB3L2Q70SY1 520 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 CACNA2D4Q7Z3S7 1137 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 GLRX5Q86SX6 157 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 TICAM1Q8IUC6 712 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 ZNF34Q8IZ26 560 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 SCML4Q8N228 414 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 HDDC3Q8N4P3 179 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 AFAP1Q8N556 730 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 PCDH20Q8N6Y1 951 aaKnown RBP3.3□□□□□ -1.88
VPS8-215ENST00000460158 ZBTB8BQ8NAP8 495 aaPredicted RBP3.3□□□□□ -1.88
VPS8-215ENST00000460158 TDRD5Q8NAT2 981 aaKnown RBP3.3□□□□□ -1.88
VPS8-215ENST00000460158 DRAXINQ8NBI3 349 aaPredicted RBP3.3□□□□□ -1.88
VPS8-215ENST00000460158 GMCL1P1Q8NEA9 526 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 CCDC148Q8NFR7 591 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 OR8K5Q8NH50 307 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 SPATA22Q8NHS9 363 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 CCDC110Q8TBZ0 833 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 CASP10Q92851 521 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 APBB2Q92870 758 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 TUBGCP3Q96CW5 907 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 MED30Q96HR3 178 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 EGLN2Q96KS0 407 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 FAM81BQ96LP2 452 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 PRAM1Q96QH2 718 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 OR2A14Q96R47 310 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 OR1F2PQ96R84 312 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 CTAGE1Q96RT6 745 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 GAD1Q99259 594 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 PCYT2Q99447 389 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 TXN2Q99757 166 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 SRSF8Q9BRL6 282 aaKnown RBP3.3□□□□□ -1.88
VPS8-215ENST00000460158 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 KLHL4Q9C0H6 718 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 ABCG8Q9H221 673 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 DPH5Q9H2P9 285 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 PIGMQ9H3S5 423 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 PLK3Q9H4B4 646 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 GAREM1Q9H706 876 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 ANO10Q9NW15 660 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 MTMR10Q9NXD2 777 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 DDX43Q9NXZ2 648 aaKnown RBP3.3□□□□□ -1.88
VPS8-215ENST00000460158 CWC15Q9P013 229 aaKnown RBP3.3□□□□□ -1.88
VPS8-215ENST00000460158 COX16Q9P0S2 106 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 C5AR2Q9P296 337 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 DNAJB9Q9UBS3 223 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 OR14J1Q9UGF5 321 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 TSPYL4Q9UJ04 414 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 PTBP2Q9UKA9 531 aaKnown RBP3.3□□□□□ -1.88
VPS8-215ENST00000460158 ACSL5Q9ULC5 683 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 WDR37Q9Y2I8 494 aa3.3□□□□□ -1.88
VPS8-215ENST00000460158 MRPL11Q9Y3B7 192 aaKnown RBP3.3□□□□□ -1.88
VPS8-215ENST00000460158 IGKV2D-30A0A075B6S6 120 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 GPR75-ASB3A0A0A6YYF3 556 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 hCG_1809904A0A1W2PP81 198 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 A0A1W2PPE2 198 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 A0A1W2PR64 198 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 A0A1W2PRV1 198 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 POLR3GO15318 223 aaPredicted RBP3.29□□□□□ -1.88
VPS8-215ENST00000460158 CTAGE5O15320 804 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 MID1O15344 667 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 SPINT2O43291 252 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 HS6ST1O60243 411 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 MTRF1O75570 445 aaKnown RBP3.29□□□□□ -1.88
VPS8-215ENST00000460158 RFPL2O75678 378 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 PPP1R3DO95685 299 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 OLFM2O95897 454 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 IFNB1P01574 187 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 RB1P06400 928 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 LINC00271P0C7V0 271 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 FDPSP14324 419 aaKnown RBP3.29□□□□□ -1.88
VPS8-215ENST00000460158 ACADLP28330 430 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms