RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 SPAM1P38567 509 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 HADHAP40939 763 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 SLC25A11Q02978 314 aaKnown RBP7.67□□□□□ -1.18
HPS4-207ENST00000459918 GBE1Q04446 702 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 ITGA9Q13797 1035 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 DPYSL3Q14195 570 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 NFKBIBQ15653 356 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 HIF1AQ16665 826 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 LONRF2Q1L5Z9 754 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 CCDC183Q5T5S1 534 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 TMEM220Q6QAJ8 160 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 SASS6Q6UVJ0 657 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 ZNF517Q6ZMY9 492 aaPredicted RBP7.67□□□□□ -1.18
HPS4-207ENST00000459918 FAM83HQ6ZRV2 1179 aaPredicted RBP7.67□□□□□ -1.18
HPS4-207ENST00000459918 IRF2BP2Q7Z5L9 587 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 TMC3Q7Z5M5 1100 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 C11orf96Q7Z7L8 435 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 CUZD1Q86UP6 607 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 CARFQ8N187 725 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 NXPE1Q8N323 547 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 RASGEF1AQ8N9B8 481 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 DNAJB14Q8TBM8 379 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 GRHL3Q8TE85 626 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 LCN9Q8WX39 176 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 HDAC11Q96DB2 347 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 RBM41Q96IZ5 413 aaKnown RBP7.67□□□□□ -1.18
HPS4-207ENST00000459918 PPM1MQ96MI6 270 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 ERGIC2Q96RQ1 377 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 SRPK1Q96SB4 655 aaKnown RBP7.67□□□□□ -1.18
HPS4-207ENST00000459918 ZNF670Q9BS34 389 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 EPS8L2Q9H6S3 715 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 KIR3DX1Q9H7L2 352 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 SYTL2Q9HCH5 934 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 ATP13A2Q9NQ11 1180 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 C1GALT1Q9NS00 363 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 LMBRD1Q9NUN5 540 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 P4HTMQ9NXG6 502 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 NFKBIL1Q9UBC1 381 aaPredicted RBP7.67□□□□□ -1.18
HPS4-207ENST00000459918 SUCOQ9UBS9 1254 aaKnown RBP7.67□□□□□ -1.18
HPS4-207ENST00000459918 LIMA1Q9UHB6 759 aaKnown RBP7.67□□□□□ -1.18
HPS4-207ENST00000459918 SLC24A2Q9UI40 661 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 NOVA2Q9UNW9 492 aaKnown RBP7.67□□□□□ -1.18
HPS4-207ENST00000459918 BTRCQ9Y297 605 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 NTNG1Q9Y2I2 539 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 PKP3Q9Y446 797 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 POLQO75417 2590 aa7.67□□□□□ -1.18
HPS4-207ENST00000459918 PCSK5Q92824 1860 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 FER1L5A0AVI2 2057 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 MDC1Q14676 2089 aaKnown RBP7.66□□□□□ -1.18
HPS4-207ENST00000459918 CCDC66A2RUB6 948 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 DDX3XO00571 662 aaKnown RBP eCLIP7.66□□□□□ -1.18
HPS4-207ENST00000459918 AURKAO14965 403 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 GPR39O43194 453 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 CD63P08962 238 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 SKILP12757 684 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 NDUFS1P28331 727 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 CA5AP35218 305 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 CTSCP53634 463 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 DMPKQ09013 629 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 ZBTB17Q13105 803 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 SSPNQ14714 243 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 ZNF169Q14929 603 aaPredicted RBP7.66□□□□□ -1.18
HPS4-207ENST00000459918 PDK2Q15119 407 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 DEFB110Q30KQ9 67 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 ANO6Q4KMQ2 910 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 VWA2Q5GFL6 755 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 AGAP7PQ5VUJ5 663 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 ZDHHC20Q5W0Z9 365 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 IGFL3Q6UXB1 125 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 Q6ZS92 163 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 ZNF571Q7Z3V5 609 aaPredicted RBP7.66□□□□□ -1.18
HPS4-207ENST00000459918 GLT6D1Q7Z4J2 308 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 KCNMB4Q86W47 210 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 BLOC1S5Q8TDH9 187 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 INPP5DQ92835 1189 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 FATE1Q969F0 183 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 DCUN1D1Q96GG9 259 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 AGAP4Q96P64 663 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 TSGA13Q96PP4 275 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 FERD3LQ96RJ6 166 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 INSM2Q96T92 566 aaPredicted RBP7.66□□□□□ -1.18
HPS4-207ENST00000459918 MAK16Q9BXY0 300 aaKnown RBP7.66□□□□□ -1.18
HPS4-207ENST00000459918 THAP2Q9H0W7 228 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 ZNF552Q9H707 407 aaPredicted RBP7.66□□□□□ -1.18
HPS4-207ENST00000459918 ZBTB20Q9HC78 741 aaPredicted RBP7.66□□□□□ -1.18
HPS4-207ENST00000459918 OLAHQ9NV23 265 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 UBP1Q9NZI7 540 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 SEMA5BQ9P283 1151 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 CDC23Q9UJX2 597 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 POMT2Q9UKY4 750 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 ACSL5Q9ULC5 683 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 MYO6Q9UM54 1294 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 SPO11Q9Y5K1 396 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 HEBP2Q9Y5Z4 205 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 PDZD2O15018 2839 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 PCM1Q15154 2024 aa7.66□□□□□ -1.18
HPS4-207ENST00000459918 A0A0A6YYK5 440 aaPredicted RBP7.65□□□□□ -1.18
HPS4-207ENST00000459918 TRGV8A0A0C4DH27 118 aa7.65□□□□□ -1.18
HPS4-207ENST00000459918 A0A1W2PQJ5 194 aa7.65□□□□□ -1.18
HPS4-207ENST00000459918 C2orf74A8MZ97 194 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms