RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 MMAAQ8IVH4 418 aaKnown RBP16.04■□□□□ 0.16
CAPN13-203ENST00000458085 PGAM4Q8N0Y7 254 aa16.04■□□□□ 0.16
CAPN13-203ENST00000458085 LILRA3Q8N6C8 439 aaPredicted RBP16.04■□□□□ 0.16
CAPN13-203ENST00000458085 RNF148Q8N7C7 305 aa16.04■□□□□ 0.16
CAPN13-203ENST00000458085 METTL6Q8TCB7 284 aa16.04■□□□□ 0.16
CAPN13-203ENST00000458085 ELMO1Q92556 727 aa16.04■□□□□ 0.16
CAPN13-203ENST00000458085 STMN2Q93045 179 aa16.04■□□□□ 0.16
CAPN13-203ENST00000458085 GLYATL1Q969I3 302 aa16.04■□□□□ 0.16
CAPN13-203ENST00000458085 ATP6V1E2Q96A05 226 aa16.04■□□□□ 0.16
CAPN13-203ENST00000458085 AREL1O15033 823 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 NUAK1O60285 661 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 PTDSS1P48651 473 aaKnown RBP16.03■□□□□ 0.16
CAPN13-203ENST00000458085 PIK3CGP48736 1102 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 LRP8Q14114 963 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 WLSQ5T9L3 541 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 C6orf163Q5TEZ5 329 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 TRIM74Q86UV6 250 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 CPA6Q8N4T0 437 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 HIPK4Q8NE63 616 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 ASB11Q8WXH4 323 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 DTD2Q96FN9 168 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 OPTCQ9UBM4 332 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 CNOT6Q9ULM6 557 aaKnown RBP16.03■□□□□ 0.16
CAPN13-203ENST00000458085 CFAP99D6REC4 459 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 TSPAN6O43657 245 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 MMP20O60882 483 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 KAT7O95251 611 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 ADRB3P13945 408 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 CCNG1P51959 295 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 STX1BP61266 288 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 CEACAM7Q14002 265 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 CCDC6Q16204 474 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 BNC2Q6ZN30 1099 aaPredicted RBP16.03■□□□□ 0.16
CAPN13-203ENST00000458085 UBTD2Q8WUN7 234 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 NRG4Q8WWG1 115 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 FOXJ1Q92949 421 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 TEX37Q96LM6 180 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 C1orf50Q9BV19 199 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 PRSS16Q9NQE7 514 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 ARL15Q9NXU5 204 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 CLEC1BQ9P126 229 aa16.03■□□□□ 0.16
CAPN13-203ENST00000458085 RECQL5O94762 991 aaPredicted RBP16.02■□□□□ 0.16
CAPN13-203ENST00000458085 CHEK2O96017 543 aa16.02■□□□□ 0.16
CAPN13-203ENST00000458085 EPHX1P07099 455 aa16.02■□□□□ 0.16
CAPN13-203ENST00000458085 WASP42768 502 aa16.02■□□□□ 0.16
CAPN13-203ENST00000458085 SOX9P48436 509 aa16.02■□□□□ 0.16
CAPN13-203ENST00000458085 ACADVLP49748 655 aa16.02■□□□□ 0.16
CAPN13-203ENST00000458085 PIGGQ5H8A4 983 aa16.02■□□□□ 0.16
CAPN13-203ENST00000458085 PLEKHS1Q5SXH7 462 aa16.02■□□□□ 0.16
CAPN13-203ENST00000458085 OGFOD2Q6N063 350 aa16.02■□□□□ 0.16
CAPN13-203ENST00000458085 IL27RAQ6UWB1 636 aa16.02■□□□□ 0.16
CAPN13-203ENST00000458085 MILR1Q7Z6M3 343 aa16.02■□□□□ 0.16
CAPN13-203ENST00000458085 RETREG3Q86VR2 466 aa16.02■□□□□ 0.16
CAPN13-203ENST00000458085 CACUL1Q86Y37 369 aa16.02■□□□□ 0.16
CAPN13-203ENST00000458085 SFRP1Q8N474 314 aa16.02■□□□□ 0.16
CAPN13-203ENST00000458085 VPS35Q96QK1 796 aa16.02■□□□□ 0.16
CAPN13-203ENST00000458085 GDF15Q99988 308 aa16.02■□□□□ 0.16
CAPN13-203ENST00000458085 SLC12A9Q9BXP2 914 aa16.02■□□□□ 0.16
CAPN13-203ENST00000458085 MRPL1Q9BYD6 325 aaKnown RBP16.02■□□□□ 0.16
CAPN13-203ENST00000458085 SDR39U1Q9NRG7 319 aaPredicted RBP16.02■□□□□ 0.16
CAPN13-203ENST00000458085 RAD18Q9NS91 495 aa16.02■□□□□ 0.16
CAPN13-203ENST00000458085 THAP10Q9P2Z0 257 aaPredicted RBP16.02■□□□□ 0.16
CAPN13-203ENST00000458085 PRPF19Q9UMS4 504 aaKnown RBP16.02■□□□□ 0.16
CAPN13-203ENST00000458085 PCDHGA7Q9Y5G6 932 aa16.02■□□□□ 0.16
CAPN13-203ENST00000458085 GPR45Q9Y5Y3 372 aa16.02■□□□□ 0.16
CAPN13-203ENST00000458085 ZFC3H1O60293 1989 aaKnown RBP16.02■□□□□ 0.16
CAPN13-203ENST00000458085 K7EPI3 171 aa16.02■□□□□ 0.15
CAPN13-203ENST00000458085 FFAR3O14843 346 aa16.02■□□□□ 0.15
CAPN13-203ENST00000458085 GPR42O15529 346 aa16.02■□□□□ 0.15
CAPN13-203ENST00000458085 OTCP00480 354 aa16.02■□□□□ 0.15
CAPN13-203ENST00000458085 C6P13671 934 aa16.02■□□□□ 0.15
CAPN13-203ENST00000458085 PSMC3P17980 439 aa16.02■□□□□ 0.15
CAPN13-203ENST00000458085 EPORP19235 508 aa16.02■□□□□ 0.15
CAPN13-203ENST00000458085 GDI1P31150 447 aa16.02■□□□□ 0.15
CAPN13-203ENST00000458085 PSMD8P48556 350 aa16.02■□□□□ 0.15
CAPN13-203ENST00000458085 TMEM115Q12893 351 aaPredicted RBP16.02■□□□□ 0.15
CAPN13-203ENST00000458085 ABRAXAS2Q15018 415 aa16.02■□□□□ 0.15
CAPN13-203ENST00000458085 MAPRE2Q15555 327 aa16.02■□□□□ 0.15
CAPN13-203ENST00000458085 ZNF423Q2M1K9 1284 aa16.02■□□□□ 0.15
CAPN13-203ENST00000458085 MMEL1Q495T6 779 aa16.02■□□□□ 0.15
CAPN13-203ENST00000458085 PREPLQ4J6C6 727 aaPredicted RBP16.02■□□□□ 0.15
CAPN13-203ENST00000458085 SLC44A4Q53GD3 710 aa16.02■□□□□ 0.15
CAPN13-203ENST00000458085 LAYNQ6UX15 382 aa16.02■□□□□ 0.15
CAPN13-203ENST00000458085 YAF2Q8IY57 180 aa16.02■□□□□ 0.15
CAPN13-203ENST00000458085 RAVER1Q8IY67 606 aaKnown RBP16.02■□□□□ 0.15
CAPN13-203ENST00000458085 MIER2Q8N344 545 aa16.02■□□□□ 0.15
CAPN13-203ENST00000458085 PYDC1Q8WXC3 89 aa16.02■□□□□ 0.15
CAPN13-203ENST00000458085 SUSD6Q92537 303 aa16.02■□□□□ 0.15
CAPN13-203ENST00000458085 PPP2R3CQ969Q6 453 aa16.02■□□□□ 0.15
CAPN13-203ENST00000458085 P2RY13Q9BPV8 354 aa16.02■□□□□ 0.15
CAPN13-203ENST00000458085 PARVBQ9HBI1 364 aa16.02■□□□□ 0.15
CAPN13-203ENST00000458085 STX18Q9P2W9 335 aaKnown RBP16.02■□□□□ 0.15
CAPN13-203ENST00000458085 H0Y858 1186 aa16.01■□□□□ 0.15
CAPN13-203ENST00000458085 PSMD11O00231 422 aa16.01■□□□□ 0.15
CAPN13-203ENST00000458085 EIF3FO00303 357 aaPredicted RBP16.01■□□□□ 0.15
CAPN13-203ENST00000458085 NR5A2O00482 541 aa16.01■□□□□ 0.15
CAPN13-203ENST00000458085 NRP2O60462 931 aa16.01■□□□□ 0.15
CAPN13-203ENST00000458085 VPS4BO75351 444 aa16.01■□□□□ 0.15
CAPN13-203ENST00000458085 STK16O75716 305 aa16.01■□□□□ 0.15
CAPN13-203ENST00000458085 AP2A2O94973 939 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms