RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 SPC24Q8NBT2 197 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 HM13Q8TCT9 377 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 INSM2Q96T92 566 aaPredicted RBP15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 COPS8Q99627 209 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 MAP3K3Q99759 626 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 BAG1Q99933 345 aaPredicted RBP15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 HRASLS2Q9NWW9 162 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 SOHLH2Q9NX45 425 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 FEZ2Q9UHY8 353 aaPredicted RBP15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 PACSIN2Q9UNF0 486 aaPredicted RBP15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 COLEC10Q9Y6Z7 277 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 CENPEQ02224 2701 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 OR6C74A6NCV1 312 aa15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 MT-ND3P03897 115 aa15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 EBLN1P0CF75 366 aa15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 ARCN1P48444 511 aaKnown RBP15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 ZNF140P52738 457 aaPredicted RBP15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 ACY1Q03154 408 aa15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 KIF5AQ12840 1032 aa15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 PRKAA1Q13131 559 aa15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 TAS2R42Q7RTR8 314 aa15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 NXPE1Q8N323 547 aa15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 TAB3Q8N5C8 712 aaPredicted RBP15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 LRRC57Q8N9N7 239 aa15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 FAM71DQ8N9W8 422 aa15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 TEX19Q8NA77 164 aa15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 SPDYE1Q8NFV5 336 aaPredicted RBP15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 HEXDCQ8WVB3 486 aa15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 DNAJC1Q96KC8 554 aaKnown RBP15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 RMDN2Q96LZ7 410 aa15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 ALS2CR12Q96Q35 445 aa15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 CD180Q99467 661 aa15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 VPS37BQ9H9H4 285 aa15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 SLC24A2Q9UI40 661 aa15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 KCND3Q9UK17 655 aa15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 HEBP2Q9Y5Z4 205 aa15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 ICE1Q9Y2F5 2266 aa15.36■□□□□ 0.05
CHCHD3-204ENST00000457942 CDC14CA4D256 554 aa15.35■□□□□ 0.05
CHCHD3-204ENST00000457942 MIF4GDA9UHW6 222 aaKnown RBP15.35■□□□□ 0.05
CHCHD3-204ENST00000457942 IFRD1O00458 451 aaPredicted RBP15.35■□□□□ 0.05
CHCHD3-204ENST00000457942 FTCDO95954 541 aa15.35■□□□□ 0.05
CHCHD3-204ENST00000457942 FOLR1P15328 257 aa15.35■□□□□ 0.05
CHCHD3-204ENST00000457942 F8A1P23610 371 aa15.35■□□□□ 0.05
CHCHD3-204ENST00000457942 NDUFS1P28331 727 aa15.35■□□□□ 0.05
CHCHD3-204ENST00000457942 PRLHRP49683 370 aa15.35■□□□□ 0.05
CHCHD3-204ENST00000457942 XIAPP98170 497 aa15.35■□□□□ 0.05
CHCHD3-204ENST00000457942 ERV3-1Q14264 604 aa15.35■□□□□ 0.05
CHCHD3-204ENST00000457942 P3H1Q32P28 736 aa15.35■□□□□ 0.05
CHCHD3-204ENST00000457942 TMTC4Q5T4D3 741 aa15.35■□□□□ 0.05
CHCHD3-204ENST00000457942 ZNF449Q6P9G9 518 aa15.35■□□□□ 0.05
CHCHD3-204ENST00000457942 KMT5CQ86Y97 462 aa15.35■□□□□ 0.05
CHCHD3-204ENST00000457942 SLC41A2Q96JW4 573 aa15.35■□□□□ 0.05
CHCHD3-204ENST00000457942 DESI2Q9BSY9 194 aa15.35■□□□□ 0.05
CHCHD3-204ENST00000457942 KIR3DX1Q9H7L2 352 aa15.35■□□□□ 0.05
CHCHD3-204ENST00000457942 LRRC40Q9H9A6 602 aa15.35■□□□□ 0.05
CHCHD3-204ENST00000457942 PADI1Q9ULC6 663 aa15.35■□□□□ 0.05
CHCHD3-204ENST00000457942 LRBAP50851 2863 aa15.35■□□□□ 0.05
CHCHD3-204ENST00000457942 ITPR2Q14571 2701 aa15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 GSAPA4D1B5 854 aa15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 VPS4BO75351 444 aa15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 TIAF1O95411 115 aa15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 ATP1B2P14415 290 aaPredicted RBP15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 TPH1P17752 444 aa15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 POLR2CP19387 275 aaPredicted RBP15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 CD97P48960 835 aa15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 HSD11B2P80365 405 aa15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 DNASE1L3Q13609 305 aa15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 POU6F1Q14863 301 aa15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 PARP6Q2NL67 630 aa15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 CERS6Q6ZMG9 384 aa15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 TMEM126BQ8IUX1 230 aa15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 LILRA3Q8N6C8 439 aaPredicted RBP15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 CT55Q8WUE5 264 aa15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 ZFPM2Q8WW38 1151 aa15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 LINC00615Q96LM1 132 aaPredicted RBP15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 FERD3LQ96RJ6 166 aa15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 CCM2Q9BSQ5 444 aa15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 TWSG1Q9GZX9 223 aa15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 LHX9Q9NQ69 397 aa15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 FGF21Q9NSA1 209 aa15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 PIH1D1Q9NWS0 290 aaKnown RBP15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 ZDHHC3Q9NYG2 299 aa15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 VPS4AQ9UN37 437 aa15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 POLHQ9Y253 713 aa15.34■□□□□ 0.05
CHCHD3-204ENST00000457942 PIKFYVEQ9Y2I7 2098 aa15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 PIPSLA2A3N6 862 aa15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 CCDC78A2IDD5 438 aa15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 ENO4A6NNW6 628 aa15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 LDB2O43679 373 aa15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 ZBTB11O95625 1053 aaPredicted RBP15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 CDH3P22223 829 aa15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 ACRV1P26436 265 aa15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 GPR19Q15760 415 aa15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 GPR33Q49SQ1 333 aa15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 FHL5Q5TD97 284 aa15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 ZNF787Q6DD87 383 aa15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 DENND5AQ6IQ26 1287 aa15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 PWWP2BQ6NUJ5 590 aa15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 ASB18Q6ZVZ8 466 aa15.33■□□□□ 0.04
CHCHD3-204ENST00000457942 TMEM135Q86UB9 458 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms