RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	CYP1A2	P05177	515 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	STS	P08842	583 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	MSL3P1	P0C860	447 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	RARA	P10276	462 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	TCF4	P15884	667 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	SOX8	P57073	446 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	DMPK	Q09013	629 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	KIF5A	Q12840	1032 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	SSPN	Q14714	243 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	PTCHD3	Q3KNS1	767 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	ZNF789	Q5FWF6	425 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	SPOCD1	Q6ZMY3	1216 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	AMZ2	Q86W34	360 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	ZGRF1	Q86YA3	2104 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	GRHL3	Q8TE85	626 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	COG1	Q8WTW3	980 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	TEKT4	Q8WW24	435 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	ZFPM2	Q8WW38	1151 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	TSGA13	Q96PP4	275 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	VPS35	Q96QK1	796 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	WDR77	Q9BQA1	342 aa	Predicted RBP	12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	C17orf62	Q9BQA9	187 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	PCDH18	Q9HCL0	1135 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	CTTNBP2NL	Q9P2B4	639 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	REXO2	Q9Y3B8	237 aa	Known RBP	12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	OR6C74	A6NCV1	312 aa		12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	MFSD11	O43934	449 aa		12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	HLA-DQB2	P05538	268 aa		12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	MTHFD1	P11586	935 aa	Known RBP	12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	AGXT	P21549	392 aa		12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	CCNC	P24863	283 aa		12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	CD86	P42081	329 aa		12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	KPNA2	P52292	529 aa	Known RBP	12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	NAP1L1	P55209	391 aa	Known RBP	12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	TMEM115	Q12893	351 aa	Predicted RBP	12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	GTF2H3	Q13889	308 aa		12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	GALNT3	Q14435	633 aa		12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	IFI16	Q16666	785 aa	Known RBP	12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	TMC3	Q7Z5M5	1100 aa		12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	RHOT2	Q8IXI1	618 aa		12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	OR1L3	Q8NH93	324 aa		12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	BRSK1	Q8TDC3	778 aa		12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	PPP4R1	Q8TF05	950 aa		12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	FAR1	Q8WVX9	515 aa		12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	TSGA10	Q9BZW7	698 aa		12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	SLC7A5P2	Q9GIP4	190 aa		12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	ZBTB20	Q9HC78	741 aa	Predicted RBP	12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	MAGEE1	Q9HCI5	957 aa		12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	IMP3	Q9NV31	184 aa	Known RBP	12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	UVRAG	Q9P2Y5	699 aa		12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	PSMD13	Q9UNM6	376 aa		12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	NOVA2	Q9UNW9	492 aa	Known RBP	12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	SHOC2	Q9UQ13	582 aa		12.8	□□□□□ -0.36
SNHG17-208	ENST00000456953	NAV3	Q8IVL0	2385 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	SLC9B1P1	A6NJY1	282 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	TMEM150C	B9EJG8	249 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	ZSCAN12	O43309	604 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	LDB2	O43679	373 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	SLC4A1	P02730	911 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	MMP2	P08253	660 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	HBQ1	P09105	142 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	BPI	P17213	487 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	TSFM	P43897	325 aa	Known RBP	12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	PREP	P48147	710 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	FBXO38	Q6PIJ6	1188 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	FJX1	Q86VR8	437 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	GDAP1	Q8TB36	358 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	SLC35G2	Q8TBE7	412 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	PPM1M	Q96MI6	270 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	TTC25	Q96NG3	672 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	AGAP3	Q96P47	875 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	TRAPPC9	Q96Q05	1148 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	GPR63	Q9BZJ6	419 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	C1GALT1	Q9NS00	363 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	P4HTM	Q9NXG6	502 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	SLC24A2	Q9UI40	661 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	SERTAD3	Q9UJW9	196 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	POMT2	Q9UKY4	750 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	TMPRSS11E	Q9UL52	423 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	TFR2	Q9UP52	801 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	PPP2R2C	Q9Y2T4	447 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	ZNF711	Q9Y462	761 aa		12.79	□□□□□ -0.36
SNHG17-208	ENST00000456953	FER1L5	A0AVI2	2057 aa		12.78	□□□□□ -0.36
SNHG17-208	ENST00000456953	DDX3Y	O15523	660 aa	Known RBP	12.78	□□□□□ -0.36
SNHG17-208	ENST00000456953	MAP3K7	O43318	606 aa		12.78	□□□□□ -0.36
SNHG17-208	ENST00000456953	POP7	O75817	140 aa	Known RBP	12.78	□□□□□ -0.36
SNHG17-208	ENST00000456953	CD63	P08962	238 aa		12.78	□□□□□ -0.36
SNHG17-208	ENST00000456953	PIRT	P0C851	137 aa		12.78	□□□□□ -0.36
SNHG17-208	ENST00000456953	CDH3	P22223	829 aa		12.78	□□□□□ -0.36
SNHG17-208	ENST00000456953	FOLR3	P41439	243 aa		12.78	□□□□□ -0.36
SNHG17-208	ENST00000456953	XRCC4	Q13426	336 aa		12.78	□□□□□ -0.36
SNHG17-208	ENST00000456953	KRT81	Q14533	505 aa		12.78	□□□□□ -0.36
SNHG17-208	ENST00000456953	PAFAH1B3	Q15102	231 aa	Known RBP	12.78	□□□□□ -0.36
SNHG17-208	ENST00000456953	ATP13A5	Q4VNC0	1218 aa		12.78	□□□□□ -0.36
SNHG17-208	ENST00000456953	ZNF385C	Q66K41	422 aa	Predicted RBP	12.78	□□□□□ -0.36
SNHG17-208	ENST00000456953	B3GNTL1	Q67FW5	361 aa	Predicted RBP	12.78	□□□□□ -0.36
SNHG17-208	ENST00000456953	TXNRD3NB	Q6F5E7	133 aa		12.78	□□□□□ -0.36
SNHG17-208	ENST00000456953	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	12.78	□□□□□ -0.36
SNHG17-208	ENST00000456953	RELT	Q969Z4	430 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms