RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 KIF1CO43896 1103 aaKnown RBP17.42■□□□□ 0.38
MSH6-207ENST00000456246 FTH1P02794 183 aa17.42■□□□□ 0.38
MSH6-207ENST00000456246 MT-ND3P03897 115 aa17.42■□□□□ 0.38
MSH6-207ENST00000456246 APRTP07741 180 aa17.42■□□□□ 0.38
MSH6-207ENST00000456246 FGF5P12034 268 aa17.42■□□□□ 0.38
MSH6-207ENST00000456246 WT1P19544 449 aaPredicted RBP17.42■□□□□ 0.38
MSH6-207ENST00000456246 PPARGP37231 505 aaPredicted RBP17.42■□□□□ 0.38
MSH6-207ENST00000456246 ARL4DP49703 201 aa17.42■□□□□ 0.38
MSH6-207ENST00000456246 CDKN1CP49918 316 aaPredicted RBP17.42■□□□□ 0.38
MSH6-207ENST00000456246 MC1RQ01726 317 aa17.42■□□□□ 0.38
MSH6-207ENST00000456246 ACY1Q03154 408 aa17.42■□□□□ 0.38
MSH6-207ENST00000456246 PRKAA1Q13131 559 aa17.42■□□□□ 0.38
MSH6-207ENST00000456246 SNX1Q13596 522 aa17.42■□□□□ 0.38
MSH6-207ENST00000456246 LY6DQ14210 128 aa17.42■□□□□ 0.38
MSH6-207ENST00000456246 DBN1Q16643 649 aa17.42■□□□□ 0.38
MSH6-207ENST00000456246 DUS1LQ6P1R4 473 aaKnown RBP17.42■□□□□ 0.38
MSH6-207ENST00000456246 CERS6Q6ZMG9 384 aa17.42■□□□□ 0.38
MSH6-207ENST00000456246 PPP1R3BQ86XI6 285 aa17.42■□□□□ 0.38
MSH6-207ENST00000456246 PIANPQ8IYJ0 282 aa17.42■□□□□ 0.38
MSH6-207ENST00000456246 SPDYE1Q8NFV5 336 aaPredicted RBP17.42■□□□□ 0.38
MSH6-207ENST00000456246 SLC12A9Q9BXP2 914 aa17.42■□□□□ 0.38
MSH6-207ENST00000456246 MVB12BQ9H7P6 319 aa17.42■□□□□ 0.38
MSH6-207ENST00000456246 SMARCAL1Q9NZC9 954 aa17.42■□□□□ 0.38
MSH6-207ENST00000456246 DRG1Q9Y295 367 aaKnown RBP17.42■□□□□ 0.38
MSH6-207ENST00000456246 PIKFYVEQ9Y2I7 2098 aa17.42■□□□□ 0.38
MSH6-207ENST00000456246 SPTA1P02549 2419 aa17.42■□□□□ 0.38
MSH6-207ENST00000456246 ZNF462Q96JM2 2506 aa17.41■□□□□ 0.38
MSH6-207ENST00000456246 LIN7AO14910 233 aaPredicted RBP17.41■□□□□ 0.38
MSH6-207ENST00000456246 FOXN2P32314 431 aa17.41■□□□□ 0.38
MSH6-207ENST00000456246 STAT5AP42229 794 aa17.41■□□□□ 0.38
MSH6-207ENST00000456246 SH3BP2P78314 561 aa17.41■□□□□ 0.38
MSH6-207ENST00000456246 PLOD1Q02809 727 aaPredicted RBP17.41■□□□□ 0.38
MSH6-207ENST00000456246 ACVR1Q04771 509 aa17.41■□□□□ 0.38
MSH6-207ENST00000456246 SIX1Q15475 284 aaPredicted RBP17.41■□□□□ 0.38
MSH6-207ENST00000456246 ZNF658BQ4V348 819 aaPredicted RBP17.41■□□□□ 0.38
MSH6-207ENST00000456246 CRTC2Q53ET0 693 aaPredicted RBP17.41■□□□□ 0.38
MSH6-207ENST00000456246 TSTD2Q5T7W7 516 aa17.41■□□□□ 0.38
MSH6-207ENST00000456246 TIPARPQ7Z3E1 657 aaKnown RBP17.41■□□□□ 0.38
MSH6-207ENST00000456246 RASGRP3Q8IV61 690 aa17.41■□□□□ 0.38
MSH6-207ENST00000456246 LILRA3Q8N6C8 439 aaPredicted RBP17.41■□□□□ 0.38
MSH6-207ENST00000456246 NAT14Q8WUY8 206 aa17.41■□□□□ 0.38
MSH6-207ENST00000456246 SGSM3Q96HU1 749 aa17.41■□□□□ 0.38
MSH6-207ENST00000456246 OR52A5Q9H2C5 316 aa17.41■□□□□ 0.38
MSH6-207ENST00000456246 CASS4Q9NQ75 786 aa17.41■□□□□ 0.38
MSH6-207ENST00000456246 IGHV5-51A0A0C4DH38 117 aa17.4■□□□□ 0.38
MSH6-207ENST00000456246 OR6C74A6NCV1 312 aa17.4■□□□□ 0.38
MSH6-207ENST00000456246 ZBTB11O95625 1053 aaPredicted RBP17.4■□□□□ 0.38
MSH6-207ENST00000456246 FGGP02679 453 aa17.4■□□□□ 0.38
MSH6-207ENST00000456246 HSD11B2P80365 405 aa17.4■□□□□ 0.38
MSH6-207ENST00000456246 CCZ1BP86790 482 aa17.4■□□□□ 0.38
MSH6-207ENST00000456246 CCZ1P86791 482 aaPredicted RBP17.4■□□□□ 0.38
MSH6-207ENST00000456246 TUBB3Q13509 450 aa17.4■□□□□ 0.38
MSH6-207ENST00000456246 CCDC38Q502W7 563 aa17.4■□□□□ 0.38
MSH6-207ENST00000456246 AARS2Q5JTZ9 985 aaKnown RBP17.4■□□□□ 0.38
MSH6-207ENST00000456246 C6orf15Q6UXA7 325 aaPredicted RBP17.4■□□□□ 0.38
MSH6-207ENST00000456246 CLDN19Q8N6F1 224 aa17.4■□□□□ 0.38
MSH6-207ENST00000456246 PPHLN1Q8NEY8 458 aaKnown RBP17.4■□□□□ 0.38
MSH6-207ENST00000456246 OR13J1Q8NGT2 312 aa17.4■□□□□ 0.38
MSH6-207ENST00000456246 OR8K5Q8NH50 307 aa17.4■□□□□ 0.38
MSH6-207ENST00000456246 EXTL1Q92935 676 aa17.4■□□□□ 0.38
MSH6-207ENST00000456246 STAMBPL1Q96FJ0 436 aa17.4■□□□□ 0.38
MSH6-207ENST00000456246 MAP3K3Q99759 626 aa17.4■□□□□ 0.38
MSH6-207ENST00000456246 TLR10Q9BXR5 811 aa17.4■□□□□ 0.38
MSH6-207ENST00000456246 RARRES3Q9UL19 164 aa17.4■□□□□ 0.38
MSH6-207ENST00000456246 TCAF1Q9Y4C2 921 aa17.4■□□□□ 0.38
MSH6-207ENST00000456246 CCDC78A2IDD5 438 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 CCDC162PA2VCL2 907 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 SPAG6O75602 509 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 OR56A5P0C7T3 313 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 PPP1CAP62136 330 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 PRAMEP78395 509 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 TBR1Q16650 682 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 LINC00303Q3SY05 128 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 TMTC4Q5T4D3 741 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 BORAQ6PGQ7 559 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 GSTA5Q7RTV2 222 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 ZNF605Q86T29 641 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 D2HGDHQ8N465 521 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 LCN9Q8WX39 176 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 TFGQ92734 400 aaPredicted RBP17.39■□□□□ 0.37
MSH6-207ENST00000456246 HDAC10Q969S8 669 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 FERD3LQ96RJ6 166 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 TSSK1BQ9BXA7 367 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 SEMA4CQ9C0C4 833 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 ADNPQ9H2P0 1102 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 SRMSQ9H3Y6 488 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 TFB2MQ9H5Q4 396 aaKnown RBP17.39■□□□□ 0.37
MSH6-207ENST00000456246 POMT2Q9UKY4 750 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 PPP2R2CQ9Y2T4 447 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 RPS6KL1Q9Y6S9 549 aa17.39■□□□□ 0.37
MSH6-207ENST00000456246 HELZ2Q9BYK8 2649 aaKnown RBP17.39■□□□□ 0.37
MSH6-207ENST00000456246 LOC101059948A0A1B0GTJ6 334 aa17.38■□□□□ 0.37
MSH6-207ENST00000456246 CEP104O60308 925 aa17.38■□□□□ 0.37
MSH6-207ENST00000456246 KDM1AO60341 852 aa17.38■□□□□ 0.37
MSH6-207ENST00000456246 KIAA0754O94854 1291 aa17.38■□□□□ 0.37
MSH6-207ENST00000456246 GOT2P00505 430 aaKnown RBP17.38■□□□□ 0.37
MSH6-207ENST00000456246 CCNYL3P0C7X3 344 aa17.38■□□□□ 0.37
MSH6-207ENST00000456246 PRSS56P0CW18 603 aa17.38■□□□□ 0.37
MSH6-207ENST00000456246 ETS1P14921 441 aa17.38■□□□□ 0.37
MSH6-207ENST00000456246 RPL22P35268 128 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms