RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 DNMT3AQ9Y6K1 912 aaPredicted RBP12.64□□□□□ -0.39
TREX1-203ENST00000456089 CCDC88CQ9P219 2028 aa12.64□□□□□ -0.39
TREX1-203ENST00000456089 K7EM74 188 aa12.63□□□□□ -0.39
TREX1-203ENST00000456089 LDB2O43679 373 aa12.63□□□□□ -0.39
TREX1-203ENST00000456089 SPAG6O75602 509 aa12.63□□□□□ -0.39
TREX1-203ENST00000456089 ETS1P14921 441 aa12.63□□□□□ -0.39
TREX1-203ENST00000456089 FOLR1P15328 257 aa12.63□□□□□ -0.39
TREX1-203ENST00000456089 MC4RP32245 332 aa12.63□□□□□ -0.39
TREX1-203ENST00000456089 ARCN1P48444 511 aaKnown RBP12.63□□□□□ -0.39
TREX1-203ENST00000456089 BASP1P80723 227 aaKnown RBP12.63□□□□□ -0.39
TREX1-203ENST00000456089 ERV3-1Q14264 604 aa12.63□□□□□ -0.39
TREX1-203ENST00000456089 PLCL1Q15111 1095 aa12.63□□□□□ -0.39
TREX1-203ENST00000456089 IGFBP7Q16270 282 aa12.63□□□□□ -0.39
TREX1-203ENST00000456089 GPR33Q49SQ1 333 aa12.63□□□□□ -0.39
TREX1-203ENST00000456089 DRICH1Q6PGQ1 229 aaPredicted RBP12.63□□□□□ -0.39
TREX1-203ENST00000456089 FBXO38Q6PIJ6 1188 aa12.63□□□□□ -0.39
TREX1-203ENST00000456089 WASH2PQ6VEQ5 465 aa12.63□□□□□ -0.39
TREX1-203ENST00000456089 PRSS42Q7Z5A4 293 aa12.63□□□□□ -0.39
TREX1-203ENST00000456089 C9orf43Q8TAL5 461 aaPredicted RBP12.63□□□□□ -0.39
TREX1-203ENST00000456089 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.63□□□□□ -0.392e-7■■■■■ 62.8
TREX1-203ENST00000456089 STAMBPL1Q96FJ0 436 aa12.63□□□□□ -0.39
TREX1-203ENST00000456089 ABHD17AQ96GS6 310 aa12.63□□□□□ -0.39
TREX1-203ENST00000456089 PBKQ96KB5 322 aa12.63□□□□□ -0.39
TREX1-203ENST00000456089 DNAJC1Q96KC8 554 aaKnown RBP12.63□□□□□ -0.39
TREX1-203ENST00000456089 CATSPER2Q96P56 530 aa12.63□□□□□ -0.39
TREX1-203ENST00000456089 COPS8Q99627 209 aa12.63□□□□□ -0.39
TREX1-203ENST00000456089 WWP1Q9H0M0 922 aa12.63□□□□□ -0.39
TREX1-203ENST00000456089 TRIT1Q9H3H1 467 aaKnown RBP12.63□□□□□ -0.39
TREX1-203ENST00000456089 FAM96AQ9H5X1 160 aa12.63□□□□□ -0.39
TREX1-203ENST00000456089 AKIRIN1Q9H9L7 192 aaPredicted RBP12.63□□□□□ -0.39
TREX1-203ENST00000456089 WASH6PQ9NQA3 447 aa12.63□□□□□ -0.39
TREX1-203ENST00000456089 IMP3Q9NV31 184 aaKnown RBP12.63□□□□□ -0.39
TREX1-203ENST00000456089 DOPEY2Q9Y3R5 2298 aa12.63□□□□□ -0.39
TREX1-203ENST00000456089 MED13Q9UHV7 2174 aa12.62□□□□□ -0.39
TREX1-203ENST00000456089 CCDC78A2IDD5 438 aa12.62□□□□□ -0.39
TREX1-203ENST00000456089 HEATR9A2RTY3 570 aa12.62□□□□□ -0.39
TREX1-203ENST00000456089 KLHL33A6NCF5 533 aa12.62□□□□□ -0.39
TREX1-203ENST00000456089 AP3B1O00203 1094 aa12.62□□□□□ -0.39
TREX1-203ENST00000456089 CCL22O00626 93 aa12.62□□□□□ -0.39
TREX1-203ENST00000456089 EBLN1P0CF75 366 aa12.62□□□□□ -0.39
TREX1-203ENST00000456089 NELFEP18615 380 aaKnown RBP12.62□□□□□ -0.39
TREX1-203ENST00000456089 ZNF449Q6P9G9 518 aa12.62□□□□□ -0.39
TREX1-203ENST00000456089 PRUNE1Q86TP1 453 aa12.62□□□□□ -0.39
TREX1-203ENST00000456089 LILRA3Q8N6C8 439 aaPredicted RBP12.62□□□□□ -0.39
TREX1-203ENST00000456089 SPDYE1Q8NFV5 336 aaPredicted RBP12.62□□□□□ -0.39
TREX1-203ENST00000456089 KLHL6Q8WZ60 621 aa12.62□□□□□ -0.39
TREX1-203ENST00000456089 ZDHHC12Q96GR4 267 aa12.62□□□□□ -0.39
TREX1-203ENST00000456089 PPM1MQ96MI6 270 aa12.62□□□□□ -0.39
TREX1-203ENST00000456089 INSM2Q96T92 566 aaPredicted RBP12.62□□□□□ -0.39
TREX1-203ENST00000456089 TTC1Q99614 292 aa12.62□□□□□ -0.39
TREX1-203ENST00000456089 NRTNQ99748 197 aa12.62□□□□□ -0.39
TREX1-203ENST00000456089 MAP3K3Q99759 626 aa12.62□□□□□ -0.39
TREX1-203ENST00000456089 EFHD1Q9BUP0 239 aa12.62□□□□□ -0.39
TREX1-203ENST00000456089 VPS37BQ9H9H4 285 aa12.62□□□□□ -0.39
TREX1-203ENST00000456089 NLE1Q9NVX2 485 aaPredicted RBP12.62□□□□□ -0.39
TREX1-203ENST00000456089 TRMT1Q9NXH9 659 aaKnown RBP12.62□□□□□ -0.39
TREX1-203ENST00000456089 FLNCQ14315 2725 aa12.62□□□□□ -0.39
TREX1-203ENST00000456089 RELNP78509 3460 aa12.62□□□□□ -0.39
TREX1-203ENST00000456089 SNRNP200O75643 2136 aaKnown RBP12.61□□□□□ -0.39
TREX1-203ENST00000456089 NBASA2RRP1 2371 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 CDC14CA4D256 554 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 TOX3O15405 576 aaPredicted RBP12.61□□□□□ -0.39
TREX1-203ENST00000456089 SUN1O94901 812 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 NTRK1P04629 796 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 POLBP06746 335 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 ZSCAN5DPP0CG00 497 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 MTHFD1P11586 935 aaKnown RBP12.61□□□□□ -0.39
TREX1-203ENST00000456089 FGF5P12034 268 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 ATP1B2P14415 290 aaPredicted RBP12.61□□□□□ -0.39
TREX1-203ENST00000456089 RPL22P35268 128 aaKnown RBP12.61□□□□□ -0.39
TREX1-203ENST00000456089 KCNJ1P48048 391 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 RPS18P62269 152 aaKnown RBP12.61□□□□□ -0.39
TREX1-203ENST00000456089 XIAPP98170 497 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 CACNG1Q06432 222 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 DMPKQ09013 629 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 MSLNQ13421 630 aaPredicted RBP12.61□□□□□ -0.39
TREX1-203ENST00000456089 TUBB3Q13509 450 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 SEMA5AQ13591 1074 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 MAP7Q14244 749 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 KRT33BQ14525 404 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 GSE1Q14687 1217 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 SIX1Q15475 284 aaPredicted RBP12.61□□□□□ -0.39
TREX1-203ENST00000456089 CCDC38Q502W7 563 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 PWWP2BQ6NUJ5 590 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 FAM199XQ6PEV8 388 aaPredicted RBP12.61□□□□□ -0.39
TREX1-203ENST00000456089 NLRP9Q7RTR0 991 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 RBM12BQ8IXT5 1001 aaKnown RBP12.61□□□□□ -0.39
TREX1-203ENST00000456089 NXPE1Q8N323 547 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 SIDT2Q8NBJ9 832 aaKnown RBP12.61□□□□□ -0.39
TREX1-203ENST00000456089 PPHLN1Q8NEY8 458 aaKnown RBP12.61□□□□□ -0.39
TREX1-203ENST00000456089 CT55Q8WUE5 264 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 APOBEC4Q8WW27 367 aaKnown RBP12.61□□□□□ -0.39
TREX1-203ENST00000456089 CDKN2AIPNLQ96HQ2 116 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 C12orf66Q96MD2 445 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 ZDHHC3Q9NYG2 299 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 EPHA6Q9UF33 1036 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 TP53TG5Q9Y2B4 290 aa12.61□□□□□ -0.39
TREX1-203ENST00000456089 PTPN13Q12923 2485 aa12.6□□□□□ -0.39
TREX1-203ENST00000456089 GOLGA6L10A0A0M3HER8 536 aa12.6□□□□□ -0.39
TREX1-203ENST00000456089 MGAT4DA6NG13 374 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms