RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 PTGIRP43119 386 aa16.93■□□□□ 0.3
USP39-208ENST00000455732 MAPK9P45984 424 aa16.93■□□□□ 0.3
USP39-208ENST00000455732 CD151P48509 253 aa16.93■□□□□ 0.3
USP39-208ENST00000455732 MAPK10P53779 464 aa16.93■□□□□ 0.3
USP39-208ENST00000455732 UCNP55089 124 aa16.93■□□□□ 0.3
USP39-208ENST00000455732 BROXQ5VW32 411 aa16.93■□□□□ 0.3
USP39-208ENST00000455732 HOOK3Q86VS8 718 aa16.93■□□□□ 0.3
USP39-208ENST00000455732 SPDYE1Q8NFV5 336 aaPredicted RBP16.93■□□□□ 0.3
USP39-208ENST00000455732 USP7Q93009 1102 aa16.93■□□□□ 0.3
USP39-208ENST00000455732 BBC3Q96PG8 261 aaPredicted RBP16.93■□□□□ 0.3
USP39-208ENST00000455732 RAB33BQ9H082 229 aa16.93■□□□□ 0.3
USP39-208ENST00000455732 FOXJ2Q9P0K8 574 aa16.93■□□□□ 0.3
USP39-208ENST00000455732 SAMD15Q9P1V8 674 aa16.93■□□□□ 0.3
USP39-208ENST00000455732 EPHA6Q9UF33 1036 aa16.93■□□□□ 0.3
USP39-208ENST00000455732 ASIC3Q9UHC3 531 aa16.93■□□□□ 0.3
USP39-208ENST00000455732 CFAP20Q9Y6A4 193 aaKnown RBP16.93■□□□□ 0.3
USP39-208ENST00000455732 FAM237BA0A1B0GVD1 139 aa16.92■□□□□ 0.3
USP39-208ENST00000455732 DNALI1O14645 258 aaPredicted RBP16.92■□□□□ 0.3
USP39-208ENST00000455732 TOX3O15405 576 aaPredicted RBP16.92■□□□□ 0.3
USP39-208ENST00000455732 POLBP06746 335 aa16.92■□□□□ 0.3
USP39-208ENST00000455732 AMD1P17707 334 aa16.92■□□□□ 0.3
USP39-208ENST00000455732 PAMP19021 973 aa16.92■□□□□ 0.3
USP39-208ENST00000455732 IVDP26440 423 aa16.92■□□□□ 0.3
USP39-208ENST00000455732 PPM1FP49593 454 aaPredicted RBP16.92■□□□□ 0.3
USP39-208ENST00000455732 TMPRSS3P57727 454 aa16.92■□□□□ 0.3
USP39-208ENST00000455732 ETF1P62495 437 aaKnown RBP16.92■□□□□ 0.3
USP39-208ENST00000455732 CXADRP78310 365 aa16.92■□□□□ 0.3
USP39-208ENST00000455732 PLOD1Q02809 727 aaPredicted RBP16.92■□□□□ 0.3
USP39-208ENST00000455732 ZNF449Q6P9G9 518 aa16.92■□□□□ 0.3
USP39-208ENST00000455732 GPR155Q7Z3F1 870 aa16.92■□□□□ 0.3
USP39-208ENST00000455732 PCGF5Q86SE9 256 aa16.92■□□□□ 0.3
USP39-208ENST00000455732 C17orf53Q8N3J3 647 aaPredicted RBP16.92■□□□□ 0.3
USP39-208ENST00000455732 SNRNP27Q8WVK2 155 aaKnown RBP16.92■□□□□ 0.3
USP39-208ENST00000455732 RSC1A1Q92681 617 aa16.92■□□□□ 0.3
USP39-208ENST00000455732 UBL7Q96S82 380 aaPredicted RBP16.92■□□□□ 0.3
USP39-208ENST00000455732 KIR3DX1Q9H7L2 352 aa16.92■□□□□ 0.3
USP39-208ENST00000455732 CPNE5Q9HCH3 593 aa16.92■□□□□ 0.3
USP39-208ENST00000455732 COLEC10Q9Y6Z7 277 aa16.92■□□□□ 0.3
USP39-208ENST00000455732 GOLGA8MH3BSY2 632 aa16.91■□□□□ 0.3
USP39-208ENST00000455732 IFRD1O00458 451 aaPredicted RBP16.91■□□□□ 0.3
USP39-208ENST00000455732 PRMT5O14744 637 aaPredicted RBP16.91■□□□□ 0.3
USP39-208ENST00000455732 VAPBO95292 243 aa16.91■□□□□ 0.3
USP39-208ENST00000455732 TYRP1P17643 537 aa16.91■□□□□ 0.3
USP39-208ENST00000455732 CSTF2P33240 577 aaKnown RBP eCLIP16.91■□□□□ 0.3
USP39-208ENST00000455732 ARCN1P48444 511 aaKnown RBP16.91■□□□□ 0.3
USP39-208ENST00000455732 DR1Q01658 176 aa16.91■□□□□ 0.3
USP39-208ENST00000455732 TYSND1Q2T9J0 566 aa16.91■□□□□ 0.3
USP39-208ENST00000455732 MRNIPQ6NTE8 343 aa16.91■□□□□ 0.3
USP39-208ENST00000455732 DUS1LQ6P1R4 473 aaKnown RBP16.91■□□□□ 0.3
USP39-208ENST00000455732 CASC4Q6P4E1 433 aa16.91■□□□□ 0.3
USP39-208ENST00000455732 KLHL35Q6PF15 583 aa16.91■□□□□ 0.3
USP39-208ENST00000455732 CES3Q6UWW8 571 aa16.91■□□□□ 0.3
USP39-208ENST00000455732 TMEM135Q86UB9 458 aa16.91■□□□□ 0.3
USP39-208ENST00000455732 LRRC6Q86X45 466 aa16.91■□□□□ 0.3
USP39-208ENST00000455732 BMPERQ8N8U9 685 aa16.91■□□□□ 0.3
USP39-208ENST00000455732 PMEPA1Q969W9 287 aa16.91■□□□□ 0.3
USP39-208ENST00000455732 C9orf72Q96LT7 481 aa16.91■□□□□ 0.3
USP39-208ENST00000455732 TSSK1BQ9BXA7 367 aa16.91■□□□□ 0.3
USP39-208ENST00000455732 SLC24A2Q9UI40 661 aa16.91■□□□□ 0.3
USP39-208ENST00000455732 PCDHGA3Q9Y5H0 932 aa16.91■□□□□ 0.3
USP39-208ENST00000455732 KALRNO60229 2985 aa16.91■□□□□ 0.3
USP39-208ENST00000455732 TEX51A0A1B0GUA7 166 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 SLC5A10A0PJK1 596 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 B4E171 279 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.9■□□□□ 0.3
USP39-208ENST00000455732 LIPCP11150 499 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 OGNP20774 298 aaKnown RBP16.9■□□□□ 0.3
USP39-208ENST00000455732 RPS3P23396 243 aaKnown RBP eCLIP16.9■□□□□ 0.33e-13■■■■□ 26.3
USP39-208ENST00000455732 CD82P27701 267 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 PDHA2P29803 388 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 TSPAN7P41732 249 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 PREPP48147 710 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 GFERP55789 205 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 DHX34Q14147 1143 aaKnown RBP16.9■□□□□ 0.3
USP39-208ENST00000455732 PLCL1Q15111 1095 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 TGIF1Q15583 401 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 ANKRD20A4Q4UJ75 823 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 RNF187Q5TA31 235 aaPredicted RBP16.9■□□□□ 0.3
USP39-208ENST00000455732 PRSS42Q7Z5A4 293 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 LDB1Q86U70 411 aaPredicted RBP16.9■□□□□ 0.3
USP39-208ENST00000455732 DTX1Q86Y01 620 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 KLHL7Q8IXQ5 586 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 AGGF1Q8N302 714 aaeCLIP16.9■□□□□ 0.3
USP39-208ENST00000455732 ELMO1Q92556 727 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 SIGLEC10Q96LC7 697 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 TAAR9Q96RI9 348 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 TCF12Q99081 682 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 CARD6Q9BX69 1037 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 P2RY12Q9H244 342 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 MVB12BQ9H7P6 319 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 OCIAD1Q9NX40 245 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.9■□□□□ 0.3
USP39-208ENST00000455732 GNPTGQ9UJJ9 305 aa16.9■□□□□ 0.3
USP39-208ENST00000455732 ZCWPW2A0A1B0GU75 182 aa16.89■□□□□ 0.29
USP39-208ENST00000455732 A8MU76 341 aa16.89■□□□□ 0.29
USP39-208ENST00000455732 SMAPO00193 183 aa16.89■□□□□ 0.29
USP39-208ENST00000455732 CAPN5O15484 640 aaPredicted RBP16.89■□□□□ 0.29
USP39-208ENST00000455732 EFSO43281 561 aa16.89■□□□□ 0.29
USP39-208ENST00000455732 USP1O94782 785 aa16.89■□□□□ 0.29
USP39-208ENST00000455732 CASQ1P31415 396 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms