RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 SNX11Q9Y5W9 270 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 GON4LQ3T8J9 2241 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 ZFC3H1O60293 1989 aaKnown RBP11.01□□□□□ -0.65
TRAF4-206ENST00000454852 OR5K4A6NMS3 321 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 PROB1E7EW31 1015 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 LMO7DNF2Z398 122 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 GFYI3L273 518 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 ARHGAP33O14559 1287 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 PRPF4O43172 522 aaKnown RBP eCLIP11.01□□□□□ -0.65
TRAF4-206ENST00000454852 PIAS2O75928 621 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 C8GP07360 202 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 ENO2P09104 434 aaPredicted RBP11.01□□□□□ -0.65
TRAF4-206ENST00000454852 ZNF883P0CG24 379 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 CCDC166P0CW27 439 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 PDHA2P29803 388 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 PI4KAP42356 2102 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 KPNA2P52292 529 aaKnown RBP11.01□□□□□ -0.65
TRAF4-206ENST00000454852 PGGT1BP53609 377 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 DLG1Q12959 904 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 ACAP2Q15057 778 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 SHBQ15464 509 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 UAP1L1Q3KQV9 507 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 SYTL3Q4VX76 610 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 TRIM61Q5EBN2 209 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 UNC5DQ6UXZ4 953 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 KANSL1Q7Z3B3 1105 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 RD3Q7Z3Z2 195 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 ISCA2Q86U28 154 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 VRK3Q8IV63 474 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 SRRM1Q8IYB3 904 aaKnown RBP11.01□□□□□ -0.65
TRAF4-206ENST00000454852 PLD6Q8N2A8 252 aaKnown RBP11.01□□□□□ -0.65
TRAF4-206ENST00000454852 LILRA3Q8N6C8 439 aaPredicted RBP11.01□□□□□ -0.65
TRAF4-206ENST00000454852 ZNF548Q8NEK5 533 aaPredicted RBP11.01□□□□□ -0.65
TRAF4-206ENST00000454852 EEF1AKMT1Q8WVE0 214 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 ASB11Q8WXH4 323 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 KIAA1191Q96A73 305 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 FAM136AQ96C01 138 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 LINGO1Q96FE5 620 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 VPS11Q9H270 941 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 ARRDC1-AS1Q9H2J1 176 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 NMRAL1Q9HBL8 299 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 PCMTD2Q9NV79 361 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 PLEKHM1Q9Y4G2 1056 aa11.01□□□□□ -0.65
TRAF4-206ENST00000454852 FOXO6A8MYZ6 492 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 PATE3B3GLJ2 98 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 TARM1B6A8C7 271 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 COPEO14579 308 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 KHNYNO15037 678 aaKnown RBP11□□□□□ -0.65
TRAF4-206ENST00000454852 AQP9O43315 295 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 PCDHGA12O60330 932 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 PSIP1O75475 530 aaKnown RBP11□□□□□ -0.65
TRAF4-206ENST00000454852 CER1O95813 267 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 RBP1P09455 135 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 ZNF806P0C7X5 589 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 F3P13726 295 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 CTSEP14091 401 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 SLC2A4P14672 509 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 BRAFP15056 766 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 EPHA8P29322 1005 aaPredicted RBP11□□□□□ -0.65
TRAF4-206ENST00000454852 ACTR1BP42025 376 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 PREPP48147 710 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 ACTR1AP61163 376 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 MAGOHP61326 146 aaKnown RBP11□□□□□ -0.65
TRAF4-206ENST00000454852 IRF9Q00978 393 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 GPS2Q13227 327 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 CSHL1Q14406 222 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 PPP1R3AQ16821 1122 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 HLA-BQ31612 363 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 PLA2G4EQ3MJ16 856 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 PRRT3Q5FWE3 981 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 CDKL4Q5MAI5 379 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 OGFOD3Q6PK18 319 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 SBSNQ6UWP8 590 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 PIWIL4Q7Z3Z4 852 aaKnown RBP11□□□□□ -0.65
TRAF4-206ENST00000454852 ADAMTSL2Q86TH1 951 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 C17orf82Q86X59 251 aaPredicted RBP11□□□□□ -0.65
TRAF4-206ENST00000454852 GKN2Q86XP6 184 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 C4orf33Q8N1A6 199 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 MYO1HQ8N1T3 1032 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 TMEM151AQ8N4L1 468 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 CCL4L1Q8NHW4 92 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 SAP25Q8TEE9 199 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 KCTD4Q8WVF5 259 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 NXNL1Q96CM4 212 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 RMDN2Q96LZ7 410 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 SLC12A9Q9BXP2 914 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 NUSAP1Q9BXS6 441 aaKnown RBP11□□□□□ -0.65
TRAF4-206ENST00000454852 CENPHQ9H3R5 247 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 RDH14Q9HBH5 336 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 TAAR2Q9P1P5 351 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 TBC1D29Q9UFV1 150 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 GRID1Q9ULK0 1009 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 KCNK6Q9Y257 313 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 TMEM131Q92545 1883 aa11□□□□□ -0.65
TRAF4-206ENST00000454852 DMDP11532 3685 aa10.99□□□□□ -0.65
TRAF4-206ENST00000454852 KIR2DS5A0A0G2JLQ3 304 aa10.99□□□□□ -0.65
TRAF4-206ENST00000454852 A0A0G2JNG1 304 aa10.99□□□□□ -0.65
TRAF4-206ENST00000454852 NEMP2A6NFY4 417 aa10.99□□□□□ -0.65
TRAF4-206ENST00000454852 GOLGA8RI6L899 631 aa10.99□□□□□ -0.65
TRAF4-206ENST00000454852 KIR2DS3K7RE56 304 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms