RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 PDPRQ8NCN5 879 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 DENND6BQ8NEG7 585 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 TSTD1Q8NFU3 115 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 PJA1Q8NG27 643 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 OR2L2Q8NH16 312 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 PIWIL2Q8TC59 973 aaKnown RBP5.88□□□□□ -1.47
SDC4P-201ENST00000453285 ASZ1Q8WWH4 475 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 GLMNQ92990 594 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 EXT2Q93063 718 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 ESAMQ96AP7 390 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 TOE1Q96GM8 510 aaKnown RBP5.88□□□□□ -1.47
SDC4P-201ENST00000453285 SCARF2Q96GP6 870 aaPredicted RBP5.88□□□□□ -1.47
SDC4P-201ENST00000453285 ZNF514Q96K75 400 aaPredicted RBP5.88□□□□□ -1.47
SDC4P-201ENST00000453285 ASB2Q96Q27 587 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 HHIPQ96QV1 700 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 ORAI3Q9BRQ5 295 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 C1QTNF7Q9BXJ2 289 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 SLC12A9Q9BXP2 914 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 ERVK-6Q9BXR3 956 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 ZCCHC2Q9C0B9 1178 aaKnown RBP5.88□□□□□ -1.47
SDC4P-201ENST00000453285 C6orf106Q9H6K1 298 aaPredicted RBP5.88□□□□□ -1.47
SDC4P-201ENST00000453285 WDR26Q9H7D7 661 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 COG4Q9H9E3 785 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 ZBTB26Q9HCK0 441 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 TNFRSF12AQ9NP84 129 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 NPHS2Q9NP85 383 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 PHPT1Q9NRX4 125 aaPredicted RBP5.88□□□□□ -1.47
SDC4P-201ENST00000453285 NUDT4Q9NZJ9 180 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 DLGAP2Q9P1A6 1054 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 ZDHHC2Q9UIJ5 367 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 TSR3Q9UJK0 312 aaKnown RBP5.88□□□□□ -1.47
SDC4P-201ENST00000453285 PTBP2Q9UKA9 531 aaKnown RBP5.88□□□□□ -1.47
SDC4P-201ENST00000453285 TMCO1Q9UM00 188 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 CYP8B1Q9UNU6 501 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 PDE10AQ9Y233 779 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 SLC17A4Q9Y2C5 497 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 CA5BQ9Y2D0 317 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 DNAJC16Q9Y2G8 782 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.88□□□□□ -1.47
SDC4P-201ENST00000453285 RAP2CQ9Y3L5 183 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 ASB1Q9Y576 335 aa5.88□□□□□ -1.47
SDC4P-201ENST00000453285 NUP214P35658 2090 aaPredicted RBP5.87□□□□□ -1.47
SDC4P-201ENST00000453285 ZDBF2Q9HCK1 2354 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 A0A1B0GTL3 188 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 NCF1BA6NI72 391 aaPredicted RBP5.87□□□□□ -1.47
SDC4P-201ENST00000453285 NCF1CA8MVU1 366 aaPredicted RBP5.87□□□□□ -1.47
SDC4P-201ENST00000453285 GPR89AB7ZAQ6 455 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 H0Y8X5 98 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 K7ESF4 209 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 E2F3O00716 465 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 PPP6CO00743 305 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 LIN7AO14910 233 aaPredicted RBP5.87□□□□□ -1.47
SDC4P-201ENST00000453285 KMOO15229 486 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 GRID2O43424 1007 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 PSIP1O75475 530 aaKnown RBP5.87□□□□□ -1.47
SDC4P-201ENST00000453285 SUPT7LO94864 414 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 SNUPNO95149 360 aaKnown RBP5.87□□□□□ -1.47
SDC4P-201ENST00000453285 HSPA4LO95757 839 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 C8GP07360 202 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 FGF4P08620 206 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 ENO2P09104 434 aaPredicted RBP5.87□□□□□ -1.47
SDC4P-201ENST00000453285 GPR89BP0CG08 455 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 TROVE2P10155 538 aaKnown RBP eCLIP5.87□□□□□ -1.47
SDC4P-201ENST00000453285 KITP10721 976 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 GFAPP14136 432 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 NCF1P14598 390 aaPredicted RBP5.87□□□□□ -1.47
SDC4P-201ENST00000453285 TSPAN8P19075 237 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 HNRNPA2B1P22626 353 aaKnown RBP5.87□□□□□ -1.47
SDC4P-201ENST00000453285 MPSTP25325 297 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 ACADLP28330 430 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 EEF1DP29692 281 aaKnown RBP5.87□□□□□ -1.47
SDC4P-201ENST00000453285 PBLDP30039 288 aaPredicted RBP5.87□□□□□ -1.47
SDC4P-201ENST00000453285 CD6P30203 668 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 OXTRP30559 389 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 GGT5P36269 586 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 PREPP48147 710 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 RPIAP49247 311 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 CDH13P55290 713 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 CLDN2P57739 230 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 KIAA1024LP59773 190 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 PFN3P60673 137 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 CDKL1Q00532 357 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 DMPKQ09013 629 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 ABRQ12979 859 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 MTAPQ13126 283 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 PRKAA1Q13131 559 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 TUBB3Q13509 450 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 GTF2H3Q13889 308 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 NFE2L1Q14494 772 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 ZSCAN26Q16670 478 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 PYCR3Q53H96 274 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 FBXO48Q5FWF7 155 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 CDKL4Q5MAI5 379 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 FAM219BQ5XKK7 198 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 METRNLQ641Q3 311 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 ANKS6Q68DC2 871 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 SULT1C3Q6IMI6 304 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 DOK6Q6PKX4 331 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 CRTC3Q6UUV7 619 aa5.87□□□□□ -1.47
SDC4P-201ENST00000453285 MAMSTRQ6ZN01 415 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms