RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 STX7O15400 261 aaKnown RBP17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 UGT1A9O60656 530 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 ABHD2P08910 425 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 UGT1A6P19224 532 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 UGT1A1P22309 533 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 UGT1A4P22310 534 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 UGT1A3P35503 534 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 HSD17B3P37058 310 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 SLC19A1P41440 591 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 GRIA1P42261 906 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 CHRNA6Q15825 494 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 MSS51Q4VC12 460 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 LDLRAP1Q5SW96 308 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 ANKS6Q68DC2 871 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 RANBP10Q6VN20 620 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 TMEM26Q6ZUK4 368 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 ARHGAP22Q7Z5H3 698 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 ZNF547Q8IVP9 402 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 DNAAF3Q8N9W5 541 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 OR52K1Q8NGK4 314 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 DTX3LQ8TDB6 740 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 TEFMQ96QE5 360 aaKnown RBP17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 WDR83Q9BRX9 315 aaKnown RBP17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 NAT9Q9BTE0 207 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 VIPAS39Q9H9C1 493 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 UGT1A7Q9HAW7 530 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 UGT1A10Q9HAW8 530 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 UGT1A8Q9HAW9 530 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 ARNT2Q9HBZ2 717 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 NINJ2Q9NZG7 142 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 TMPRSS11EQ9UL52 423 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 TEX264Q9Y6I9 313 aa17.66■□□□□ 0.42
SQSTM1-204ENST00000453046 RIPK2O43353 540 aa17.65■□□□□ 0.42
SQSTM1-204ENST00000453046 ATP8B1O43520 1251 aa17.65■□□□□ 0.42
SQSTM1-204ENST00000453046 SPAG6O75602 509 aa17.65■□□□□ 0.42
SQSTM1-204ENST00000453046 UBXN7O94888 489 aa17.65■□□□□ 0.42
SQSTM1-204ENST00000453046 TTC4O95801 387 aa17.65■□□□□ 0.42
SQSTM1-204ENST00000453046 AGTP01019 485 aa17.65■□□□□ 0.42
SQSTM1-204ENST00000453046 TYRP1P17643 537 aa17.65■□□□□ 0.42
SQSTM1-204ENST00000453046 HALP42357 657 aa17.65■□□□□ 0.42
SQSTM1-204ENST00000453046 FASTKD3Q14CZ7 662 aaKnown RBP17.65■□□□□ 0.42
SQSTM1-204ENST00000453046 UAP1Q16222 522 aaPredicted RBP17.65■□□□□ 0.42
SQSTM1-204ENST00000453046 ABRAXAS1Q6UWZ7 409 aa17.65■□□□□ 0.42
SQSTM1-204ENST00000453046 PYROXD1Q8WU10 500 aa17.65■□□□□ 0.42
SQSTM1-204ENST00000453046 UBLCP1Q8WVY7 318 aaPredicted RBP17.65■□□□□ 0.42
SQSTM1-204ENST00000453046 CTRCQ99895 268 aa17.65■□□□□ 0.42
SQSTM1-204ENST00000453046 FUT8Q9BYC5 575 aa17.65■□□□□ 0.42
SQSTM1-204ENST00000453046 IL22Q9GZX6 179 aa17.65■□□□□ 0.42
SQSTM1-204ENST00000453046 UCK1Q9HA47 277 aa17.65■□□□□ 0.42
SQSTM1-204ENST00000453046 POT1Q9NUX5 634 aa17.65■□□□□ 0.42
SQSTM1-204ENST00000453046 BFARQ9NZS9 450 aa17.65■□□□□ 0.42
SQSTM1-204ENST00000453046 ZNF624Q9P2J8 865 aaPredicted RBP17.65■□□□□ 0.42
SQSTM1-204ENST00000453046 PCDHGA4Q9Y5G9 962 aa17.65■□□□□ 0.42
SQSTM1-204ENST00000453046 SDR42E2A6NKP2 422 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 OR52A4PA6NMU1 304 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 C2orf81A6NN90 581 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 KCNJ13O60928 360 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 AVILO75366 819 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 BANF1O75531 89 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 LPOP22079 712 aaPredicted RBP17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 AKT1P31749 480 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 NPY2RP49146 381 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 ARSDP51689 593 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 SESN2P58004 480 aaPredicted RBP17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 MC2RQ01718 297 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 OLIG2Q13516 323 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 DENND5AQ6IQ26 1287 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 CEACAM20Q6UY09 585 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 WASH2PQ6VEQ5 465 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 C11orf96Q7Z7L8 435 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 AMZ2Q86W34 360 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 RBM12BQ8IXT5 1001 aaKnown RBP17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 CACNA2D3Q8IZS8 1091 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 BMPERQ8N8U9 685 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 FBXO36Q8NEA4 188 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 DDHD1Q8NEL9 900 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 NKD1Q969G9 470 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 STAMBPL1Q96FJ0 436 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 MED8Q96G25 268 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 SIGLEC10Q96LC7 697 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 C9orf72Q96LT7 481 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 APOL2Q9BQE5 337 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 SEMA4CQ9C0C4 833 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 EPB41L4BQ9H329 900 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 WASH6PQ9NQA3 447 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 ZNF446Q9NWS9 450 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 CHMP2BQ9UQN3 213 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 ARL5AQ9Y689 179 aa17.64■□□□□ 0.41
SQSTM1-204ENST00000453046 OR2AG2A6NM03 316 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 GPR39O43194 453 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 RAD1O60671 282 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 POP7O75817 140 aaKnown RBP17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 GSTA2P09210 222 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 NUDT17P0C025 328 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 BRAFP15056 766 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 MSH3P20585 1137 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 MGAT1P26572 445 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 ELK3P41970 407 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 GFERP55789 205 aa17.63■□□□□ 0.41
SQSTM1-204ENST00000453046 PTPRCAPQ14761 206 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms