RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 AAGABQ6PD74 315 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 SHC4Q6S5L8 630 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 METTL23Q86XA0 190 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 CCDC170Q8IYT3 715 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 CEP57L1Q8IYX8 460 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 ZNF444Q8N0Y2 327 aaPredicted RBP4.34□□□□□ -1.71
LINC00393-202ENST00000452852 C16orf52Q8NHV5 167 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 HUS1BQ8NHY5 278 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 GDAP1Q8TB36 358 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 MGARPQ8TDB4 240 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 DEPDC1BQ8WUY9 529 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 NSMCE1Q8WV22 266 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 IGFBPL1Q8WX77 278 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 SNX21Q969T3 373 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 ZNF419Q96HQ0 510 aaPredicted RBP4.34□□□□□ -1.71
LINC00393-202ENST00000452852 PPP1R13BQ96KQ4 1090 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 FCRL4Q96PJ5 515 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 CITED2Q99967 270 aaPredicted RBP4.34□□□□□ -1.71
LINC00393-202ENST00000452852 TMEM47Q9BQJ4 181 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 TMEM79Q9BSE2 394 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 HGH1Q9BTY7 390 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 SCNM1Q9BWG6 230 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 NACAP1Q9BZK3 213 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 GOLPH3LQ9H4A5 285 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 COQ3Q9NZJ6 369 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 DNAJB9Q9UBS3 223 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 AMACRQ9UHK6 382 aa4.34□□□□□ -1.71
LINC00393-202ENST00000452852 TRIOBPQ9H2D6 2365 aa4.34□□□□□ -1.72
LINC00393-202ENST00000452852 VCANP13611 3396 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 CEP290O15078 2479 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 MYH6P13533 1939 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 ROBO3Q96MS0 1386 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 MROH7Q68CQ1 1323 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 LOC100509620A0A075B734 347 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 PI4K2BG5E9Z4 385 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 VWA5AO00534 786 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 INPPL1O15357 1258 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 RNF113AO15541 343 aaKnown RBP4.33□□□□□ -1.72
LINC00393-202ENST00000452852 GPAA1O43292 621 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 KLK8O60259 260 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 GPC4O75487 556 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 WNT1P04628 370 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 TPOP07202 933 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 PGK2P07205 417 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 CTSAP10619 480 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 TFPIP10646 304 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 PCNAP12004 261 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 ETFAP13804 333 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 ATP6V1B1P15313 513 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 NR4A2P43354 598 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 CCR3P51677 355 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 POLGP54098 1239 aaPredicted RBP4.33□□□□□ -1.72
LINC00393-202ENST00000452852 CSE1LP55060 971 aaKnown RBP4.33□□□□□ -1.72
LINC00393-202ENST00000452852 TMPRSS3P57727 454 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 ECT2LQ008S8 904 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 ID2Q02363 134 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 NAE1Q13564 534 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 CAPSQ13938 189 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 KCNC3Q14003 757 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 NFE2L1Q14494 772 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 E2F5Q15329 346 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 RBMS2Q15434 407 aaKnown RBP4.33□□□□□ -1.72
LINC00393-202ENST00000452852 SHBQ15464 509 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 SOWAHAQ2M3V2 549 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 TCTN1Q2MV58 587 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 PCGF3Q3KNV8 242 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 SBK1Q52WX2 424 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 C6orf163Q5TEZ5 329 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 KRT79Q5XKE5 535 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 SNRNP48Q6IEG0 339 aaKnown RBP4.33□□□□□ -1.72
LINC00393-202ENST00000452852 Q7L0L9 218 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 CAMKMTQ7Z624 323 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 SLC35F3Q8IY50 421 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 NUP93Q8N1F7 819 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 NAT8LQ8N9F0 302 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 TC2NQ8N9U0 490 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 KBTBD3Q8NAB2 608 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 MCUQ8NE86 351 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 TRPV1Q8NER1 839 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 OR8K5Q8NH50 307 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 PTPMT1Q8WUK0 201 aaPredicted RBP4.33□□□□□ -1.72
LINC00393-202ENST00000452852 TEKT4Q8WW24 435 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 IGSF8Q969P0 613 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 CCDC34Q96HJ3 373 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 RAB3IPQ96QF0 476 aaPredicted RBP4.33□□□□□ -1.72
LINC00393-202ENST00000452852 FSD1Q9BTV5 496 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 TEX13BQ9BXU2 312 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 MRPL1Q9BYD6 325 aaKnown RBP4.33□□□□□ -1.72
LINC00393-202ENST00000452852 NAPBQ9H115 298 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 C2orf40Q9H1Z8 148 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 MOV10Q9HCE1 1003 aaKnown RBP4.33□□□□□ -1.72
LINC00393-202ENST00000452852 PSD3Q9NYI0 1048 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 MTRRQ9UBK8 725 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 UTS2RQ9UKP6 389 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 A3GALT2U3KPV4 340 aa4.33□□□□□ -1.72
LINC00393-202ENST00000452852 GBF1Q92538 1859 aa4.32□□□□□ -1.72
LINC00393-202ENST00000452852 TTC41PQ6P2S7 1318 aa4.32□□□□□ -1.72
LINC00393-202ENST00000452852 TRBV5-7A0A0A0MS05 114 aa4.32□□□□□ -1.72
LINC00393-202ENST00000452852 TRAV34A0A0B4J273 112 aa4.32□□□□□ -1.72
LINC00393-202ENST00000452852 F5H6K3 240 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms